You are here

Home

ASPNIDRAFT_207580-T1, ASPNIDRAFT_207580-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_207580-T1
Unique NameASPNIDRAFT_207580-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:2988327..2989286-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_207580-T1 ID=ASPNIDRAFT_207580-T1|Name=ASPNIDRAFT_207580-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=960bp|location=Sequence derived from alignment at ACJE01000021.1:2988327..2989286- (Aspergillus niger ATCC 1015)
ATGAGAATTAGTCAAGATCAACCAGAAATAACCCTGTACCGCGGCTTCCC
CGGCACAGGGATCTACACATGGTCTCCCTTCGTCACAAAACTCGAAGCCC
GACTTCGGCTCGCAGGGCTATCTTATCGTACTGAAAGTGGGTCGATTCGC
GCCGCGCCACGGGGCAAAGTGCCTTATGTTACTGTCAGCGATACCGACGA
GTCGGGGAGAAATCAGGCTCGGACAATGTCTGATTCGGGTCTCATTATAC
AAGATTTCGTCAATGAGGCGGTACTCCCTGATCTAAATGGGGATTTGACT
GTGCAGGAGAAAGTCCTCGACTCAGGGGTTAGGGCGTTGTTGGAAGACAA
GCTGTATTTCCTTCAGGTATCATCACCGTCCACACTGCCTGTACATTGCG
AGATAATTAACCAAAAGTAGGGCTACGAAAAATGGATCGACAATTACTAT
TCCATGCGTGCACACATCCTCGCCTCACTGCCATATCCCGTCCAGGTTAT
CGTGGGGCATCTCATCTACCGGAAACAGTATCAGGTATTGCACGGGCAAG
GGACACTGAGATATTCAGACGCGGAACGGACGACATTCAAAAAACAGATA
TGGGAGGAAATTAATGCATTACTGGCGGATTCTAGGTTGAACAGTGATCG
GAAGGGAGTATTCTGGGTACTTGGAGGTCAGCGTCCGACTGAAGCTGATG
TTACGCTGTTTGGGTTCATTGTTGGGGCATTGATCTGTACTGCGTGAGTT
GTCTGTCATGAGATATAATGAGCTTGGGATGCTAATGGATTGCAGATGTC
CTGAGACGCAAAGGATCGTGAGAGGGTTGCCGGTGGTCGTGGAGTATGCG
CACAGGATCCATGATCGGTATTTTCCGGATTATGAGCTTTGGGCGGAGGA
TTGAGTTCAATTTTTCATTTATGTTATCTGTATCAAATTGAAGTCATGTC
AACTCATGCC
back to top

Coding sequence (CDS) from alignment at ACJE01000021.1:2988327..2989286-

>ASPNIDRAFT_207580-T1 ID=ASPNIDRAFT_207580-T1|Name=ASPNIDRAFT_207580-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2394bp|location=Sequence derived from alignment at ACJE01000021.1:2988327..2989286- (Aspergillus niger ATCC 1015)
ATGTCCTGAGACGCAAAGGATCGTGAGAGGGTTGCCGGTGGTCGTGGAGT
ATGCGCACAGGATCCATGATCGGTATTTTCCGGATTATGAGCTTTGGGCG
GAGGATTGAGGCTACGAAAAATGGATCGACAATTACTATTCCATGCGTGC
ACACATCCTCGCCTCACTGCCATATCCCGTCCAGGTTATCGTGGGGCATC
TCATCTACCGGAAACAGTATCAGGTATTGCACGGGCAAGGGACACTGAGA
TATTCAGACGCGGAACGGACGACATTCAAAAAACAGATATGGGAGGAAAT
TAATGCATTACTGGCGGATTCTAGGTTGAACAGTGATCGGAAGGGAGTAT
TCTGGGTACTTGGAGGTCAGCGTCCGACTGAAGCTGATGTTACGCTGTTT
GGGTTCATTGTTGGGGCATTGATCTGTACTGCATGAGAATTAGTCAAGAT
CAACCAGAAATAACCCTGTACCGCGGCTTCCCCGGCACAGGGATCTACAC
ATGGTCTCCCTTCGTCACAAAACTCGAAGCCCGACTTCGGCTCGCAGGGC
TATCTTATCGTACTGAAAGTGGGTCGATTCGCGCCGCGCCACGGGGCAAA
GTGCCTTATGTTACTGTCAGCGATACCGACGAGTCGGGGAGAAATCAGGC
TCGGACAATGTCTGATTCGGGTCTCATTATACAAGATTTCGTCAATGAGG
CGGTACTCCCTGATCTAAATGGGGATTTGACTGTGCAGGAGAAAGTCCTC
GACTCAGGGGTTAGGGCGTTGTTGGAAGACAAGCTGTATTTCCTTCAGAT
GTCCTGAGACGCAAAGGATCGTGAGAGGGTTGCCGGTGGTCGTGGAGTAT
GCGCACAGGATCCATGATCGGTATTTTCCGGATTATGAGCTTTGGGCGGA
GGATTGAGGCTACGAAAAATGGATCGACAATTACTATTCCATGCGTGCAC
ACATCCTCGCCTCACTGCCATATCCCGTCCAGGTTATCGTGGGGCATCTC
ATCTACCGGAAACAGTATCAGGTATTGCACGGGCAAGGGACACTGAGATA
TTCAGACGCGGAACGGACGACATTCAAAAAACAGATATGGGAGGAAATTA
ATGCATTACTGGCGGATTCTAGGTTGAACAGTGATCGGAAGGGAGTATTC
TGGGTACTTGGAGGTCAGCGTCCGACTGAAGCTGATGTTACGCTGTTTGG
GTTCATTGTTGGGGCATTGATCTGTACTGCATGAGAATTAGTCAAGATCA
ACCAGAAATAACCCTGTACCGCGGCTTCCCCGGCACAGGGATCTACACAT
GGTCTCCCTTCGTCACAAAACTCGAAGCCCGACTTCGGCTCGCAGGGCTA
TCTTATCGTACTGAAAGTGGGTCGATTCGCGCCGCGCCACGGGGCAAAGT
GCCTTATGTTACTGTCAGCGATACCGACGAGTCGGGGAGAAATCAGGCTC
GGACAATGTCTGATTCGGGTCTCATTATACAAGATTTCGTCAATGAGGCG
GTACTCCCTGATCTAAATGGGGATTTGACTGTGCAGGAGAAAGTCCTCGA
CTCAGGGGTTAGGGCGTTGTTGGAAGACAAGCTGTATTTCCTTCAGATGT
CCTGAGACGCAAAGGATCGTGAGAGGGTTGCCGGTGGTCGTGGAGTATGC
GCACAGGATCCATGATCGGTATTTTCCGGATTATGAGCTTTGGGCGGAGG
ATTGAGGCTACGAAAAATGGATCGACAATTACTATTCCATGCGTGCACAC
ATCCTCGCCTCACTGCCATATCCCGTCCAGGTTATCGTGGGGCATCTCAT
CTACCGGAAACAGTATCAGGTATTGCACGGGCAAGGGACACTGAGATATT
CAGACGCGGAACGGACGACATTCAAAAAACAGATATGGGAGGAAATTAAT
GCATTACTGGCGGATTCTAGGTTGAACAGTGATCGGAAGGGAGTATTCTG
GGTACTTGGAGGTCAGCGTCCGACTGAAGCTGATGTTACGCTGTTTGGGT
TCATTGTTGGGGCATTGATCTGTACTGCATGAGAATTAGTCAAGATCAAC
CAGAAATAACCCTGTACCGCGGCTTCCCCGGCACAGGGATCTACACATGG
TCTCCCTTCGTCACAAAACTCGAAGCCCGACTTCGGCTCGCAGGGCTATC
TTATCGTACTGAAAGTGGGTCGATTCGCGCCGCGCCACGGGGCAAAGTGC
CTTATGTTACTGTCAGCGATACCGACGAGTCGGGGAGAAATCAGGCTCGG
ACAATGTCTGATTCGGGTCTCATTATACAAGATTTCGTCAATGAGGCGGT
ACTCCCTGATCTAAATGGGGATTTGACTGTGCAGGAGAAAGTCCTCGACT
CAGGGGTTAGGGCGTTGTTGGAAGACAAGCTGTATTTCCTTCAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_207580ASPNIDRAFT_207580Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_207580-T1ASPNIDRAFT_207580-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_207580-T1.cdsASPNIDRAFT_207580-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_207580-T1.utr3p1ASPNIDRAFT_207580-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_207580-T1.exon3ASPNIDRAFT_207580-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_207580-T1.exon2ASPNIDRAFT_207580-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_207580-T1.exon1ASPNIDRAFT_207580-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000211.8
NoteEggNog:ENOG41
DBxrefInterPro:IPR040079
DBxrefInterPro:IPR026928
DBxrefInterPro:IPR012336
DBxrefPFAM:PF17172
DBxrefPFAM:PF13410
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:2988327..2989286 -
Powered by Drupal