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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000021.1:1798467..1800305+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_207862-T1 ID=ASPNIDRAFT_207862-T1|Name=ASPNIDRAFT_207862-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1839bp|location=Sequence derived from alignment at ACJE01000021.1:1798467..1800305+ (Aspergillus niger ATCC 1015)
ATGAGACCACCCGCTTATTAATTCTCAGTAACCATCAGTGATTGTTCCGC
CATCAGCATGGATCAAGGTATCCAACAAAACTCGTTCATTTCCGTCAAGG
ACTCCGGTTCTGCCAAAAACTCGGGCCCGTCGCTGCTTGCCTGTCTGCTG
TGCCGACACAAGCACCTAAAATGTGATGGAAAAACTCCTGTCTGCGGTCG
TTGTTCCGCTACAGGATCTGAATGTCAATACACCCCGTCGCGTCGCGGGT
ACAAGGGCCCCTCGAAGAAGCGTCGAGCCAATCCATCCTCCCCCGACCAA
CTCCCTGCCGACATGTCGACCTCGTTCGAGCCCCAATACTTCAATGTGCC
GTCTGACTGGACTCTGGCGAGTAACATGCCCATGTCCTATGCGGTGCCAG
CCACCACTACCCCCGTGCCGACTTCCCTGCCCTCCTCTTCCTTGCCGTCC
GGCAGTCCCGCTCTGACAGATCATTCCGGCTCCTCGCACTCGCAGCCGGT
CGGCGTCTCCAATAGCCCCATGACTCCGGACTCGATCTCTACCATTGCCG
GCGATGGCTATCTTATCGATATCTTCTATACCTACTTTCATCCTTCCCAC
CCGGTCTTGCCGCCGCACCGTGTCCTTTACCGCAATCCCGTGCCTGCGTT
CCTGGAGCATGTCATCAAATTCATCGGGACCCACTTCACTCCGGCCGCCA
ACAGTGAGAACTACAGGCCGTCGGTAATGTCCTCCGTGATGGACCAGGAA
GGGTCTATCGAGAAATTGCAGGCCCTGGTGCTTCTCGCCATTGTCTTGCA
TTCCCGCAATGAGCGACAGAAGGCGGGCGAGTGCGTCACGACGGCTGTTA
ATCTGGCCTTTGAGTTGAGATTGAACACGAGAGACGCTGCGCCAATGCTC
AGCAATGGCGACCCGGTGCGGGAAGAGAGCTTGAGGCGTACCTGGTGGGA
GCTGTTCATTATTGAAGGCATGCTGACTGCGCTGGGTGTTCAGCCAGCTT
TTCGGTGCAATTCTGGGCCGCTCGAGGTACCATTGCCCTGTGAGGAGCGT
ATCTACCAGGATGCCCTCCCGCCTCCGCCTGCGCCTACCGTTGCGCAATT
CGACGAGCGTGTCTTTGCAGACGAAGAGCGGGATTTCTCTTCCTTCACTT
ACCGAATCGAGGCTGTTCGCATCCTGGGACGCGTAGTGTCCATCCAAGAC
ATGATTGAGGGCCAACAGGACCATGTCGAGGCCATTGACGCGCGGATTAC
CAGTTTCTTCCACCACCTGCCCGAGAACAAGGCCGAACTGCTGCGCCCGG
ACGGGTCGGTCGACGAGATGATGTTCCAAGCGACAATGATTGTCAACGGC
TCTGCAATTTACCTCCATTTCCCGAGATCTGACCTGCTGTCGTCCCCAGC
GGTGGCAGCGGAGGTTATCTGCGGCCATCACGGGCCGCTGAGCATCCCGG
CCTTCTCGCATCATGCGCATGCCATGAAGGCGGTGAAGGCAGCCAGCGAG
ATCTCCTCGCTGGCGTCTATCCGCATGCCAGTTGTGAAGCACACGCCCTT
CTTCATCTGTGCGCTGGTCCTCAGCTCCATGGTGCAGTTGGCTGCATGCT
CTGTCAAAGCCGGGCAGATGCCCGACCCCAGCCGTGACCGGCTGACGCTT
ACCATTGGCGTTTTCAAGACCCTGGGACGGACCTGGGCGATTTCGCAGAC
CATTATGCATCAGATCAAGGCCGTCGCCCGCGATGTGATGGACCTTGGCC
TTCGGCCTACCATGCCCGAGATTGATCTGACAACCGTCCTCGACAACAGT
CGGTTTTGGATACCCGACCTCCTTCCGATGGCCAGGTAA back to topCoding sequence (CDS) from alignment at ACJE01000021.1:1798467..1800305+ >ASPNIDRAFT_207862-T1 ID=ASPNIDRAFT_207862-T1|Name=ASPNIDRAFT_207862-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1782bp|location=Sequence derived from alignment at ACJE01000021.1:1798467..1800305+ (Aspergillus niger ATCC 1015)
ATGGATCAAGGTATCCAACAAAACTCGTTCATTTCCGTCAAGGACTCCGG
TTCTGCCAAAAACTCGGGCCCGTCGCTGCTTGCCTGTCTGCTGTGCCGAC
ACAAGCACCTAAAATGTGATGGAAAAACTCCTGTCTGCGGTCGTTGTTCC
GCTACAGGATCTGAATGTCAATACACCCCGTCGCGTCGCGGGTACAAGGG
CCCCTCGAAGAAGCGTCGAGCCAATCCATCCTCCCCCGACCAACTCCCTG
CCGACATGTCGACCTCGTTCGAGCCCCAATACTTCAATGTGCCGTCTGAC
TGGACTCTGGCGAGTAACATGCCCATGTCCTATGCGGTGCCAGCCACCAC
TACCCCCGTGCCGACTTCCCTGCCCTCCTCTTCCTTGCCGTCCGGCAGTC
CCGCTCTGACAGATCATTCCGGCTCCTCGCACTCGCAGCCGGTCGGCGTC
TCCAATAGCCCCATGACTCCGGACTCGATCTCTACCATTGCCGGCGATGG
CTATCTTATCGATATCTTCTATACCTACTTTCATCCTTCCCACCCGGTCT
TGCCGCCGCACCGTGTCCTTTACCGCAATCCCGTGCCTGCGTTCCTGGAG
CATGTCATCAAATTCATCGGGACCCACTTCACTCCGGCCGCCAACAGTGA
GAACTACAGGCCGTCGGTAATGTCCTCCGTGATGGACCAGGAAGGGTCTA
TCGAGAAATTGCAGGCCCTGGTGCTTCTCGCCATTGTCTTGCATTCCCGC
AATGAGCGACAGAAGGCGGGCGAGTGCGTCACGACGGCTGTTAATCTGGC
CTTTGAGTTGAGATTGAACACGAGAGACGCTGCGCCAATGCTCAGCAATG
GCGACCCGGTGCGGGAAGAGAGCTTGAGGCGTACCTGGTGGGAGCTGTTC
ATTATTGAAGGCATGCTGACTGCGCTGGGTGTTCAGCCAGCTTTTCGGTG
CAATTCTGGGCCGCTCGAGGTACCATTGCCCTGTGAGGAGCGTATCTACC
AGGATGCCCTCCCGCCTCCGCCTGCGCCTACCGTTGCGCAATTCGACGAG
CGTGTCTTTGCAGACGAAGAGCGGGATTTCTCTTCCTTCACTTACCGAAT
CGAGGCTGTTCGCATCCTGGGACGCGTAGTGTCCATCCAAGACATGATTG
AGGGCCAACAGGACCATGTCGAGGCCATTGACGCGCGGATTACCAGTTTC
TTCCACCACCTGCCCGAGAACAAGGCCGAACTGCTGCGCCCGGACGGGTC
GGTCGACGAGATGATGTTCCAAGCGACAATGATTGTCAACGGCTCTGCAA
TTTACCTCCATTTCCCGAGATCTGACCTGCTGTCGTCCCCAGCGGTGGCA
GCGGAGGTTATCTGCGGCCATCACGGGCCGCTGAGCATCCCGGCCTTCTC
GCATCATGCGCATGCCATGAAGGCGGTGAAGGCAGCCAGCGAGATCTCCT
CGCTGGCGTCTATCCGCATGCCAGTTGTGAAGCACACGCCCTTCTTCATC
TGTGCGCTGGTCCTCAGCTCCATGGTGCAGTTGGCTGCATGCTCTGTCAA
AGCCGGGCAGATGCCCGACCCCAGCCGTGACCGGCTGACGCTTACCATTG
GCGTTTTCAAGACCCTGGGACGGACCTGGGCGATTTCGCAGACCATTATG
CATCAGATCAAGGCCGTCGCCCGCGATGTGATGGACCTTGGCCTTCGGCC
TACCATGCCCGAGATTGATCTGACAACCGTCCTCGACAACAGTCGGTTTT
GGATACCCGACCTCCTTCCGATGGCCAGGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR007219 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000021.1 | supercontig | ACJE01000021.1:1798467..1800305 + |
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