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ASPNIDRAFT_207921-T1, ASPNIDRAFT_207921-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_207921-T1
Unique NameASPNIDRAFT_207921-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:1661853..1662755-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_207921-T1 ID=ASPNIDRAFT_207921-T1|Name=ASPNIDRAFT_207921-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=903bp|location=Sequence derived from alignment at ACJE01000021.1:1661853..1662755- (Aspergillus niger ATCC 1015)
CTAAAACGCTTAACTTATCTCCACCATCTTCACCCTCAACTTTAATTCAA
CTCTATTTCCGTTTACTTTATAGACAACCTTCACAATGACTGGCCGTAAG
TTCATCACTTCCCATCATGGGCTATCTATCATCTCGATAGATTGTCCACT
GCCGTCTACTCCATGATCAACAGTGACTGACTTGACGCGTCTCAACAGGT
GGAAAGGGTGGAAAGGGTCTCGGCAAGGGTGGCGCCAAGCGTCACCGCAA
GATCTTGCGTGACAACATCCAGGGTATCACTAAGCCCGCTATCCGTCGTC
TCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTGCCATGATCTACGAGGAG
ACCCGTGGTGTCCTCAAGACCTTCCTTGAGGGTGTCATCCGTGACGCTGT
CACCTACACTGAGCACGCCAAGCGCAAGACCGTCACCTCCCTCGACGTCG
TCTATGCTCTTAAGAGACAGGGCCGTAAGTACCACACGTTTTGGCTTTTG
TGTGTCCAACGCGTCTAACATGGAATTCCTCAGGTACCCTCTACGGTTTC
GGTGGTTAAACGCCTTTTTTATTTTCCTGCTTGTTTCTTTTTAGCCATCC
TGCGCGGTCGGCGCGTCAGTTGTCCTTCCGCAGCAGTGACGCGACGGGTT
GCTTTTTCGGGTTGGTTCATGGTATGACTGGGACGTTGGGGTGTTCTTGA
TCTTTTTATTACAAGTATCATGGGTCTGGGTTTGCTTTGTCGTATTTTAT
TTACTATTACGCGTCCACTACCGGTCTGCTGGTGGTCGTGGTTGAATTTC
TGTATCATAGCGGCCTTTTACGCTTCGGCTGGTGCCATAGGCTAAAGAGG
ATCGTGCGACCTTGACGCGATCCGATATGAATACGAACGGTCGAAAATGA
TCA
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Coding sequence (CDS) from alignment at ACJE01000021.1:1661853..1662755-

>ASPNIDRAFT_207921-T1 ID=ASPNIDRAFT_207921-T1|Name=ASPNIDRAFT_207921-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=936bp|location=Sequence derived from alignment at ACJE01000021.1:1661853..1662755- (Aspergillus niger ATCC 1015)
GTACCCTCTACGGTTTCGGTGGTTAAGTGGAAAGGGTGGAAAGGGTCTCG
GCAAGGGTGGCGCCAAGCGTCACCGCAAGATCTTGCGTGACAACATCCAG
GGTATCACTAAGCCCGCTATCCGTCGTCTCGCTCGTCGTGGTGGTGTCAA
GCGTATCTCTGCCATGATCTACGAGGAGACCCGTGGTGTCCTCAAGACCT
TCCTTGAGGGTGTCATCCGTGACGCTGTCACCTACACTGAGCACGCCAAG
CGCAAGACCGTCACCTCCCTCGACGTCGTCTATGCTCTTAAGAGACAGGG
CCATGACTGGCCGTACCCTCTACGGTTTCGGTGGTTAAGTGGAAAGGGTG
GAAAGGGTCTCGGCAAGGGTGGCGCCAAGCGTCACCGCAAGATCTTGCGT
GACAACATCCAGGGTATCACTAAGCCCGCTATCCGTCGTCTCGCTCGTCG
TGGTGGTGTCAAGCGTATCTCTGCCATGATCTACGAGGAGACCCGTGGTG
TCCTCAAGACCTTCCTTGAGGGTGTCATCCGTGACGCTGTCACCTACACT
GAGCACGCCAAGCGCAAGACCGTCACCTCCCTCGACGTCGTCTATGCTCT
TAAGAGACAGGGCCATGACTGGCCGTACCCTCTACGGTTTCGGTGGTTAA
GTGGAAAGGGTGGAAAGGGTCTCGGCAAGGGTGGCGCCAAGCGTCACCGC
AAGATCTTGCGTGACAACATCCAGGGTATCACTAAGCCCGCTATCCGTCG
TCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTGCCATGATCTACGAGG
AGACCCGTGGTGTCCTCAAGACCTTCCTTGAGGGTGTCATCCGTGACGCT
GTCACCTACACTGAGCACGCCAAGCGCAAGACCGTCACCTCCCTCGACGT
CGTCTATGCTCTTAAGAGACAGGGCCATGACTGGCC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0000786nucleosome
Vocabulary: Biological Process
TermDefinition
GO:0006352DNA-templated transcription, initiation
Vocabulary: Molecular Function
TermDefinition
GO:0046982protein heterodimerization activity
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_207921ASPNIDRAFT_207921Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_207921-T1ASPNIDRAFT_207921-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_207921-T1.cdsASPNIDRAFT_207921-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_207921-T1.utr3p1ASPNIDRAFT_207921-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_207921-T1.exon3ASPNIDRAFT_207921-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_207921-T1.exon2ASPNIDRAFT_207921-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_207921-T1.exon1ASPNIDRAFT_207921-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_207921-T1.utr5p1ASPNIDRAFT_207921-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR019809
DBxrefInterPro:IPR009072
DBxrefInterPro:IPR035425
DBxrefInterPro:IPR004823
DBxrefInterPro:IPR001951
DBxrefPFAM:PF02969
DBxrefPFAM:PF15511
ProductH4 histone 4 protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:1661853..1662755 -
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