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ASPNIDRAFT_208390-T1, ASPNIDRAFT_208390-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_208390-T1
Unique NameASPNIDRAFT_208390-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:332964..333639+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_208390-T1 ID=ASPNIDRAFT_208390-T1|Name=ASPNIDRAFT_208390-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=676bp|location=Sequence derived from alignment at ACJE01000021.1:332964..333639+ (Aspergillus niger ATCC 1015)
GACTAGTGAAACCGTCACTATGACTCAACCCAACCCTTACGTTCTGGCCG
CCGACAACCCGGGCGCCGTCCTGACTCTGTTGCAGTCCAACCCCTCCATC
GCCTCGAACCAGGACGAGCACGGATATTCATTACTCCATGCTGCGGCTTC
ATACGGACACATCGACCTGCTACGCGCCCTTGTCAAGGACTACAACGTGG
ACGTCAACCTGCTCGACGAGGACGGTGAAACCTGCCTGTTTGTGACGGAA
AGCCTCGACATTGCGAAGTGCCTTGTTGAGGAATTGGGCGTGGACTACAA
CAAGAGAAACGACGAGGGCCTCGCAGCCTATGAGACTATCGAGAGCGATG
GCTCGTTCCCGCAAATCGCTGCTTACCTGCGGCAAGTCGCCGGTGTGCCA
GAACCTGCCGCTGACTCGGCTGACGACGCACTAAACCCGGCCCCTCCGCT
TCCCCCGAATATCCAGATGAACCTGGGCACGGTGTCGGAACAGGAGGCGA
GTGCAGGAATGGATGAGGTCGACCCGGAGTTCAAGCGGCGCATCGATGAG
CTTGCGGCGCGGGAGGATTTCCACAGCGAAGCTACGCAGAATCAGCTGCG
CCAGTTGGTCATGGATGCTATTTCGGGGTCCGGCATTAACACTCAGGAGC
GGGATGTGCGGCGCAGGACGGATTAA
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Coding sequence (CDS) from alignment at ACJE01000021.1:332964..333639+

>ASPNIDRAFT_208390-T1 ID=ASPNIDRAFT_208390-T1|Name=ASPNIDRAFT_208390-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=657bp|location=Sequence derived from alignment at ACJE01000021.1:332964..333639+ (Aspergillus niger ATCC 1015)
ATGACTCAACCCAACCCTTACGTTCTGGCCGCCGACAACCCGGGCGCCGT
CCTGACTCTGTTGCAGTCCAACCCCTCCATCGCCTCGAACCAGGACGAGC
ACGGATATTCATTACTCCATGCTGCGGCTTCATACGGACACATCGACCTG
CTACGCGCCCTTGTCAAGGACTACAACGTGGACGTCAACCTGCTCGACGA
GGACGGTGAAACCTGCCTGTTTGTGACGGAAAGCCTCGACATTGCGAAGT
GCCTTGTTGAGGAATTGGGCGTGGACTACAACAAGAGAAACGACGAGGGC
CTCGCAGCCTATGAGACTATCGAGAGCGATGGCTCGTTCCCGCAAATCGC
TGCTTACCTGCGGCAAGTCGCCGGTGTGCCAGAACCTGCCGCTGACTCGG
CTGACGACGCACTAAACCCGGCCCCTCCGCTTCCCCCGAATATCCAGATG
AACCTGGGCACGGTGTCGGAACAGGAGGCGAGTGCAGGAATGGATGAGGT
CGACCCGGAGTTCAAGCGGCGCATCGATGAGCTTGCGGCGCGGGAGGATT
TCCACAGCGAAGCTACGCAGAATCAGCTGCGCCAGTTGGTCATGGATGCT
ATTTCGGGGTCCGGCATTAACACTCAGGAGCGGGATGTGCGGCGCAGGAC
GGATTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_208390ASPNIDRAFT_208390Aspergillus niger ATCC 1015gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_208390-T1.utr5p1ASPNIDRAFT_208390-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_208390-T1.exon1ASPNIDRAFT_208390-T1.exon1Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_208390-T1.cdsASPNIDRAFT_208390-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_208390-T1ASPNIDRAFT_208390-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09265313
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR002110
DBxrefPFAM:PF13857
DBxrefPFAM:PF13637
DBxrefPFAM:PF13606
DBxrefPFAM:PF12796
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:332964..333639 +
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