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ASPNIDRAFT_208651-T1, ASPNIDRAFT_208651-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_208651-T1
Unique NameASPNIDRAFT_208651-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000019.1:574847..575856-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_208651-T1 ID=ASPNIDRAFT_208651-T1|Name=ASPNIDRAFT_208651-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1010bp|location=Sequence derived from alignment at ACJE01000019.1:574847..575856- (Aspergillus niger ATCC 1015)
CAGACTCTGTTCTTTAAAGACAGCATCCAGCTTGTCATTCCGACTTCAAC
TCCTCCATCCTATCCCGATTGCCCCTTGAGGCTCATCACCCGACTACCGA
TTATTTCATCCCCAGCGTTCCGACCCTCGTCCGGATAATCTTAGAGTCAC
CTTCCTTCGACCTACACTTCCTTTGATCCGTGCAGCTCGACCAGTACAGC
AGGTCTTCGAGCTTACGACTCCACTCGCCTCCCTCCTTCTTCTCCGGTCC
TCTCTTCTTTCTTCATATTCGAAATGGATCACTCCAGAGATCCCTGCCCC
TGGGTTGCTCTTAGCGACTTCGGTGGTGCTTTCTGCATGGGTGTACGTCA
CTGGTTCTAGCAATCGATTGTGCTTGTTACCAATGGGTCAAAACTAAACA
TATGTTGTGTCTATAGGCAATTGGTGGTGCTGTCTGGCACGGTGTGAAGG
GTTTCAGAAACAGCCCCTACGGAGAGCGCCGGATAGGTGCCATCACAGCC
ATCAAGGCTCGTGCGCCTGTTCTCGGTGGTAACTTCGGTGTTTGGGGTGG
TATGTTCTCGACGTTCGACTGTGCGATCAAGGGTATCAGAAAGAAGGAAG
ATCCTTACAATGCTAGTATGTTTCCCGGTCAATCCGTGAGGGATTGCTAT
CTTGTTTCTATGCGCTTTGAGATTGGGTGTCATAGCTAACGATTCACACT
TTGCAGTCATTGCTGGTTTCTTCACTGGTGGTGCTTTGGCCGTTCGTGGT
GGTGTTAAGGCTGCCAGAAACTCCGCTATCATGTGCGCTGTCTTCCTGGC
TGTCATTGAGGGTGTCGGTATCGGTTTCCAGAGAATGATGGCCGACAACA
CAAAACTAGAGGTGAGATCATATCCCACATTCGTCTCTGATGTCGTGTGG
CCACTCGACCTGCAAAGGCTACACCTCATTGCTGAAGCTTATTGAGTACT
GACTTGCCACTACTTTAGCTTCCTCCTGCCCCTCCGTCCGGCGACAAGGC
CGTCGCTTAA
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Coding sequence (CDS) from alignment at ACJE01000019.1:574847..575856-

>ASPNIDRAFT_208651-T1 ID=ASPNIDRAFT_208651-T1|Name=ASPNIDRAFT_208651-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1860bp|location=Sequence derived from alignment at ACJE01000019.1:574847..575856- (Aspergillus niger ATCC 1015)
CTTCCTCCTGCCCCTCCGTCCGGCGACAAGGCCGTCGCTTAATCATTGCT
GGTTTCTTCACTGGTGGTGCTTTGGCCGTTCGTGGTGGTGTTAAGGCTGC
CAGAAACTCCGCTATCATGTGCGCTGTCTTCCTGGCTGTCATTGAGGGTG
TCGGTATCGGTTTCCAGAGAATGATGGCCGACAACACAAAACTAGAGGCA
ATTGGTGGTGCTGTCTGGCACGGTGTGAAGGGTTTCAGAAACAGCCCCTA
CGGAGAGCGCCGGATAGGTGCCATCACAGCCATCAAGGCTCGTGCGCCTG
TTCTCGGTGGTAACTTCGGTGTTTGGGGTGGTATGTTCTCGACGTTCGAC
TGTGCGATCAAGGGTATCAGAAAGAAGGAAGATCCTTACAATGCTAATGG
ATCACTCCAGAGATCCCTGCCCCTGGGTTGCTCTTAGCGACTTCGGTGGT
GCTTTCTGCATGGGTCTTCCTCCTGCCCCTCCGTCCGGCGACAAGGCCGT
CGCTTAATCATTGCTGGTTTCTTCACTGGTGGTGCTTTGGCCGTTCGTGG
TGGTGTTAAGGCTGCCAGAAACTCCGCTATCATGTGCGCTGTCTTCCTGG
CTGTCATTGAGGGTGTCGGTATCGGTTTCCAGAGAATGATGGCCGACAAC
ACAAAACTAGAGGCAATTGGTGGTGCTGTCTGGCACGGTGTGAAGGGTTT
CAGAAACAGCCCCTACGGAGAGCGCCGGATAGGTGCCATCACAGCCATCA
AGGCTCGTGCGCCTGTTCTCGGTGGTAACTTCGGTGTTTGGGGTGGTATG
TTCTCGACGTTCGACTGTGCGATCAAGGGTATCAGAAAGAAGGAAGATCC
TTACAATGCTAATGGATCACTCCAGAGATCCCTGCCCCTGGGTTGCTCTT
AGCGACTTCGGTGGTGCTTTCTGCATGGGTCTTCCTCCTGCCCCTCCGTC
CGGCGACAAGGCCGTCGCTTAATCATTGCTGGTTTCTTCACTGGTGGTGC
TTTGGCCGTTCGTGGTGGTGTTAAGGCTGCCAGAAACTCCGCTATCATGT
GCGCTGTCTTCCTGGCTGTCATTGAGGGTGTCGGTATCGGTTTCCAGAGA
ATGATGGCCGACAACACAAAACTAGAGGCAATTGGTGGTGCTGTCTGGCA
CGGTGTGAAGGGTTTCAGAAACAGCCCCTACGGAGAGCGCCGGATAGGTG
CCATCACAGCCATCAAGGCTCGTGCGCCTGTTCTCGGTGGTAACTTCGGT
GTTTGGGGTGGTATGTTCTCGACGTTCGACTGTGCGATCAAGGGTATCAG
AAAGAAGGAAGATCCTTACAATGCTAATGGATCACTCCAGAGATCCCTGC
CCCTGGGTTGCTCTTAGCGACTTCGGTGGTGCTTTCTGCATGGGTCTTCC
TCCTGCCCCTCCGTCCGGCGACAAGGCCGTCGCTTAATCATTGCTGGTTT
CTTCACTGGTGGTGCTTTGGCCGTTCGTGGTGGTGTTAAGGCTGCCAGAA
ACTCCGCTATCATGTGCGCTGTCTTCCTGGCTGTCATTGAGGGTGTCGGT
ATCGGTTTCCAGAGAATGATGGCCGACAACACAAAACTAGAGGCAATTGG
TGGTGCTGTCTGGCACGGTGTGAAGGGTTTCAGAAACAGCCCCTACGGAG
AGCGCCGGATAGGTGCCATCACAGCCATCAAGGCTCGTGCGCCTGTTCTC
GGTGGTAACTTCGGTGTTTGGGGTGGTATGTTCTCGACGTTCGACTGTGC
GATCAAGGGTATCAGAAAGAAGGAAGATCCTTACAATGCTAATGGATCAC
TCCAGAGATCCCTGCCCCTGGGTTGCTCTTAGCGACTTCGGTGGTGCTTT
CTGCATGGGT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TIM17ASPNIDRAFT_208651Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_208651-T1ASPNIDRAFT_208651-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_208651-T1.cdsASPNIDRAFT_208651-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_208651-T1.exon4ASPNIDRAFT_208651-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_208651-T1.exon3ASPNIDRAFT_208651-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_208651-T1.exon2ASPNIDRAFT_208651-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_208651-T1.exon1ASPNIDRAFT_208651-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_208651-T1.utr5p1ASPNIDRAFT_208651-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09265E6R
DBxrefPFAM:PF02466
Producttranslocase of the inner membrane
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000019.1supercontigACJE01000019.1:574847..575856 -
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