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ASPNIDRAFT_209086-T1, ASPNIDRAFT_209086-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_209086-T1
Unique NameASPNIDRAFT_209086-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000019.1:2477710..2478675-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_209086-T1 ID=ASPNIDRAFT_209086-T1|Name=ASPNIDRAFT_209086-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=966bp|location=Sequence derived from alignment at ACJE01000019.1:2477710..2478675- (Aspergillus niger ATCC 1015)
ATGGCCACTGGTCCAGCTACTCAATCCCTCAAGGTCAGCATCATCCACCT
GCGTGTCCGTCTGTCAGATTGCGGCTAACGGAGCGCTGGTGCACACAGTG
TGTGGTGACGGGTGATGGTGCGGTAGGAAAAGTATGTTGCTCCCCTTTCA
GCCAGCTCGACCTCTCTCTCCCTCCCCCTCCCTCCCCCCTCTCGCTTCCT
AGATCGGTCGATTTCGTTATCGCTGTTGCTAATCGAACGATAGACATGTC
TCCTGATTTCGTACACGACCAACGCTTTCCCCGGCGAATATATCCCTACC
GTGTCCGTACCCCCCTTGGACCCTGATACTCCTCGTCTGATGCGGACCTC
GTGTGTTGACCGGATTCCCGCAGATTTGATAACTACACCGCTAGTGTCAT
GGTAGATGGCCGACCGATTAGCTTGGGACTCTGGGATACTGCTGGACAGG
AAGATTACGACCGTCTTCGCCCATTGTCCTACCCGCAAACCGACGTCTTC
CTGATCTGCTTCTCCATCGTTAGCCCGCCGTCCTTTGACAACGTTAAAGC
CAAGGTGCTTCCTTCACCATCCCTATCGACCGGAGACCCGCTTACTGACC
CTGACGGATGTAGTGGTTCCCGGAGATTGAACACCATGCCCCCAACGTCC
CCATTATCTTGGTCGGCACCAAGCTCGACCTTCGAGACGACCGTGGTACC
ATAGATGCTCTCCGACAGCGGAAGATGGAGCCCGTCTCCTACGAACAAGC
TCTGGCCGTGGCCAAGGAAATCCGGGCACACAAGTACCTCGAATGTTCGG
CCCTGACGCAGCGCAACCTGAAGAGTGTATTCGACGAGGCGATTCGGTAT
GTTCGAACAAACCCATATACTACTGGAATTGGGGGACTAACGTTCACATA
GCGCCGTGCTCAATCCCCGGCCTGCGGCCAAACCGAAGAACAAGAAATGC
GTGATTCTGTAGATCG
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Coding sequence (CDS) from alignment at ACJE01000019.1:2477710..2478675-

>ASPNIDRAFT_209086-T1 ID=ASPNIDRAFT_209086-T1|Name=ASPNIDRAFT_209086-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3600bp|location=Sequence derived from alignment at ACJE01000019.1:2477710..2478675- (Aspergillus niger ATCC 1015)
CGCCGTGCTCAATCCCCGGCCTGCGGCCAAACCGAAGAACAAGAAATGCG
TGATTCTGTAGTGGTTCCCGGAGATTGAACACCATGCCCCCAACGTCCCC
ATTATCTTGGTCGGCACCAAGCTCGACCTTCGAGACGACCGTGGTACCAT
AGATGCTCTCCGACAGCGGAAGATGGAGCCCGTCTCCTACGAACAAGCTC
TGGCCGTGGCCAAGGAAATCCGGGCACACAAGTACCTCGAATGTTCGGCC
CTGACGCAGCGCAACCTGAAGAGTGTATTCGACGAGGCGATTCGATTTGA
TAACTACACCGCTAGTGTCATGGTAGATGGCCGACCGATTAGCTTGGGAC
TCTGGGATACTGCTGGACAGGAAGATTACGACCGTCTTCGCCCATTGTCC
TACCCGCAAACCGACGTCTTCCTGATCTGCTTCTCCATCGTTAGCCCGCC
GTCCTTTGACAACGTTAAAGCCAAGACATGTCTCCTGATTTCGTACACGA
CCAACGCTTTCCCCGGCGAATATATCCCTACCGTTGTGTGGTGACGGGTG
ATGGTGCGGTAGGAAAAATGGCCACTGGTCCAGCTACTCAATCCCTCAAG
CGCCGTGCTCAATCCCCGGCCTGCGGCCAAACCGAAGAACAAGAAATGCG
TGATTCTGTAGTGGTTCCCGGAGATTGAACACCATGCCCCCAACGTCCCC
ATTATCTTGGTCGGCACCAAGCTCGACCTTCGAGACGACCGTGGTACCAT
AGATGCTCTCCGACAGCGGAAGATGGAGCCCGTCTCCTACGAACAAGCTC
TGGCCGTGGCCAAGGAAATCCGGGCACACAAGTACCTCGAATGTTCGGCC
CTGACGCAGCGCAACCTGAAGAGTGTATTCGACGAGGCGATTCGATTTGA
TAACTACACCGCTAGTGTCATGGTAGATGGCCGACCGATTAGCTTGGGAC
TCTGGGATACTGCTGGACAGGAAGATTACGACCGTCTTCGCCCATTGTCC
TACCCGCAAACCGACGTCTTCCTGATCTGCTTCTCCATCGTTAGCCCGCC
GTCCTTTGACAACGTTAAAGCCAAGACATGTCTCCTGATTTCGTACACGA
CCAACGCTTTCCCCGGCGAATATATCCCTACCGTTGTGTGGTGACGGGTG
ATGGTGCGGTAGGAAAAATGGCCACTGGTCCAGCTACTCAATCCCTCAAG
CGCCGTGCTCAATCCCCGGCCTGCGGCCAAACCGAAGAACAAGAAATGCG
TGATTCTGTAGTGGTTCCCGGAGATTGAACACCATGCCCCCAACGTCCCC
ATTATCTTGGTCGGCACCAAGCTCGACCTTCGAGACGACCGTGGTACCAT
AGATGCTCTCCGACAGCGGAAGATGGAGCCCGTCTCCTACGAACAAGCTC
TGGCCGTGGCCAAGGAAATCCGGGCACACAAGTACCTCGAATGTTCGGCC
CTGACGCAGCGCAACCTGAAGAGTGTATTCGACGAGGCGATTCGATTTGA
TAACTACACCGCTAGTGTCATGGTAGATGGCCGACCGATTAGCTTGGGAC
TCTGGGATACTGCTGGACAGGAAGATTACGACCGTCTTCGCCCATTGTCC
TACCCGCAAACCGACGTCTTCCTGATCTGCTTCTCCATCGTTAGCCCGCC
GTCCTTTGACAACGTTAAAGCCAAGACATGTCTCCTGATTTCGTACACGA
CCAACGCTTTCCCCGGCGAATATATCCCTACCGTTGTGTGGTGACGGGTG
ATGGTGCGGTAGGAAAAATGGCCACTGGTCCAGCTACTCAATCCCTCAAG
CGCCGTGCTCAATCCCCGGCCTGCGGCCAAACCGAAGAACAAGAAATGCG
TGATTCTGTAGTGGTTCCCGGAGATTGAACACCATGCCCCCAACGTCCCC
ATTATCTTGGTCGGCACCAAGCTCGACCTTCGAGACGACCGTGGTACCAT
AGATGCTCTCCGACAGCGGAAGATGGAGCCCGTCTCCTACGAACAAGCTC
TGGCCGTGGCCAAGGAAATCCGGGCACACAAGTACCTCGAATGTTCGGCC
CTGACGCAGCGCAACCTGAAGAGTGTATTCGACGAGGCGATTCGATTTGA
TAACTACACCGCTAGTGTCATGGTAGATGGCCGACCGATTAGCTTGGGAC
TCTGGGATACTGCTGGACAGGAAGATTACGACCGTCTTCGCCCATTGTCC
TACCCGCAAACCGACGTCTTCCTGATCTGCTTCTCCATCGTTAGCCCGCC
GTCCTTTGACAACGTTAAAGCCAAGACATGTCTCCTGATTTCGTACACGA
CCAACGCTTTCCCCGGCGAATATATCCCTACCGTTGTGTGGTGACGGGTG
ATGGTGCGGTAGGAAAAATGGCCACTGGTCCAGCTACTCAATCCCTCAAG
CGCCGTGCTCAATCCCCGGCCTGCGGCCAAACCGAAGAACAAGAAATGCG
TGATTCTGTAGTGGTTCCCGGAGATTGAACACCATGCCCCCAACGTCCCC
ATTATCTTGGTCGGCACCAAGCTCGACCTTCGAGACGACCGTGGTACCAT
AGATGCTCTCCGACAGCGGAAGATGGAGCCCGTCTCCTACGAACAAGCTC
TGGCCGTGGCCAAGGAAATCCGGGCACACAAGTACCTCGAATGTTCGGCC
CTGACGCAGCGCAACCTGAAGAGTGTATTCGACGAGGCGATTCGATTTGA
TAACTACACCGCTAGTGTCATGGTAGATGGCCGACCGATTAGCTTGGGAC
TCTGGGATACTGCTGGACAGGAAGATTACGACCGTCTTCGCCCATTGTCC
TACCCGCAAACCGACGTCTTCCTGATCTGCTTCTCCATCGTTAGCCCGCC
GTCCTTTGACAACGTTAAAGCCAAGACATGTCTCCTGATTTCGTACACGA
CCAACGCTTTCCCCGGCGAATATATCCCTACCGTTGTGTGGTGACGGGTG
ATGGTGCGGTAGGAAAAATGGCCACTGGTCCAGCTACTCAATCCCTCAAG
CGCCGTGCTCAATCCCCGGCCTGCGGCCAAACCGAAGAACAAGAAATGCG
TGATTCTGTAGTGGTTCCCGGAGATTGAACACCATGCCCCCAACGTCCCC
ATTATCTTGGTCGGCACCAAGCTCGACCTTCGAGACGACCGTGGTACCAT
AGATGCTCTCCGACAGCGGAAGATGGAGCCCGTCTCCTACGAACAAGCTC
TGGCCGTGGCCAAGGAAATCCGGGCACACAAGTACCTCGAATGTTCGGCC
CTGACGCAGCGCAACCTGAAGAGTGTATTCGACGAGGCGATTCGATTTGA
TAACTACACCGCTAGTGTCATGGTAGATGGCCGACCGATTAGCTTGGGAC
TCTGGGATACTGCTGGACAGGAAGATTACGACCGTCTTCGCCCATTGTCC
TACCCGCAAACCGACGTCTTCCTGATCTGCTTCTCCATCGTTAGCCCGCC
GTCCTTTGACAACGTTAAAGCCAAGACATGTCTCCTGATTTCGTACACGA
CCAACGCTTTCCCCGGCGAATATATCCCTACCGTTGTGTGGTGACGGGTG
ATGGTGCGGTAGGAAAAATGGCCACTGGTCCAGCTACTCAATCCCTCAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0007264small GTPase mediated signal transduction
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RAC1ASPNIDRAFT_209086Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_209086-T1ASPNIDRAFT_209086-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_209086-T1.cdsASPNIDRAFT_209086-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_209086-T1.utr3p1ASPNIDRAFT_209086-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_209086-T1.exon6ASPNIDRAFT_209086-T1.exon6Aspergillus niger ATCC 1015exon
ASPNIDRAFT_209086-T1.exon5ASPNIDRAFT_209086-T1.exon5Aspergillus niger ATCC 1015exon
ASPNIDRAFT_209086-T1.exon4ASPNIDRAFT_209086-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_209086-T1.exon3ASPNIDRAFT_209086-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_209086-T1.exon2ASPNIDRAFT_209086-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_209086-T1.exon1ASPNIDRAFT_209086-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR003578
DBxrefInterPro:IPR001806
DBxrefInterPro:IPR005225
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF00025
ProductRho GTPase protein rac1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000019.1supercontigACJE01000019.1:2477710..2478675 -
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