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ASPNIDRAFT_209100-T1, ASPNIDRAFT_209100-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_209100-T1
Unique NameASPNIDRAFT_209100-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000019.1:2519736..2520653+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_209100-T1 ID=ASPNIDRAFT_209100-T1|Name=ASPNIDRAFT_209100-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=918bp|location=Sequence derived from alignment at ACJE01000019.1:2519736..2520653+ (Aspergillus niger ATCC 1015)
CTCCAGCCATGTTCCCTCAGCGCAACGCCCTTCGTCTGTCTCAGCGCGCT
GCCCAGCAGCTGCGTGCTGCTCCGGTTCGCTCCACCGTCCAGCGCCGTCT
CAACAGCTCCGACTCCAAGCTCCCCTCTTGGGCCGTCGACAACGAATTCA
ACCGCGAGAGAGAGGCCGTCAAGCACCACGCTGCTGCTACCAGTGGTGCG
TATTGAGATCAATTGATGCCGAGATCTTGCAAGGATGTGGTTGTGCTAAC
TCAATGGCTGTCTTACTGCTCCAGATCTGTGGCGCAAGCTCTCCATCTAG
TATGTGGGCTAGCTATTACTACCGCAATTGACTTCTAGTAACATTCTACT
TTTTCGCAGCGCCGTCATTCCTGTCCTGATTGCCGGAGGTATCAACGCCT
ACAACCTTTGGACTGAGCACTGGGAACACTGGGCGCACATGCCCCCGCTC
GAGGAGCGTACCGAGTACCCCTACCAGAACATCCGTGTGAAGAACTTCCC
CTGGGGAGACGGTGACAAGGTGCGTCCCAGACATTTTACTCTCATGCAAT
GCCAATCTGAGTGCTGACGATTTTATTTCTTTCTCCAGACCATCTTGTAA
GTTCCTTACACCCGAAATTTCCAGCGTCGGGCATAACTCGACAGTCAATA
ATAACGATGCCTTCTAACAAACTCACAGCTGGAACTCCGACGTCAACTAC
CACAACAAGGACAAGGCTACCTAAGTGCCCGCCGTTGATTATGGGAGTAC
AGCGTCTTTGATTGATCTTGACTGTTGACGGGAGGGGAAATCAAAAGACA
TGTATATTTACTGACAAAATACGCGGAAGTAAGAATAACGAGGGCAAGGC
TCTCGTTGGTGGAGTTGAGATAGCGCGCCATACAATACTGCTAAGCCATT
TTTCTTTTGTTGTGCTGC
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Coding sequence (CDS) from alignment at ACJE01000019.1:2519736..2520653+

>ASPNIDRAFT_209100-T1 ID=ASPNIDRAFT_209100-T1|Name=ASPNIDRAFT_209100-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2130bp|location=Sequence derived from alignment at ACJE01000019.1:2519736..2520653+ (Aspergillus niger ATCC 1015)
ATGTTCCCTCAGCGCAACGCCCTTCGTCTGTCTCAGCGCGCTGCCCAGCA
GCTGCGTGCTGCTCCGGTTCGCTCCACCGTCCAGCGCCGTCTCAACAGCT
CCGACTCCAAGCTCCCCTCTTGGGCCGTCGACAACGAATTCAACCGCGAG
AGAGAGGCCGTCAAGCACCACGCTGCTGCTACCAGTGATCTGTGGCGCAA
GCTCTCCATCTACGCCGTCATTCCTGTCCTGATTGCCGGAGGTATCAACG
CCTACAACCTTTGGACTGAGCACTGGGAACACTGGGCGCACATGCCCCCG
CTCGAGGAGCGTACCGAGTACCCCTACCAGAACATCCGTGTGAAGAACTT
CCCCTGGGGAGACGGTGACAAGACCATCTTCTGGAACTCCGACGTCAACT
ACCACAACAAGGACAAGGCTACCTAAATGTTCCCTCAGCGCAACGCCCTT
CGTCTGTCTCAGCGCGCTGCCCAGCAGCTGCGTGCTGCTCCGGTTCGCTC
CACCGTCCAGCGCCGTCTCAACAGCTCCGACTCCAAGCTCCCCTCTTGGG
CCGTCGACAACGAATTCAACCGCGAGAGAGAGGCCGTCAAGCACCACGCT
GCTGCTACCAGTGATCTGTGGCGCAAGCTCTCCATCTACGCCGTCATTCC
TGTCCTGATTGCCGGAGGTATCAACGCCTACAACCTTTGGACTGAGCACT
GGGAACACTGGGCGCACATGCCCCCGCTCGAGGAGCGTACCGAGTACCCC
TACCAGAACATCCGTGTGAAGAACTTCCCCTGGGGAGACGGTGACAAGAC
CATCTTCTGGAACTCCGACGTCAACTACCACAACAAGGACAAGGCTACCT
AAATGTTCCCTCAGCGCAACGCCCTTCGTCTGTCTCAGCGCGCTGCCCAG
CAGCTGCGTGCTGCTCCGGTTCGCTCCACCGTCCAGCGCCGTCTCAACAG
CTCCGACTCCAAGCTCCCCTCTTGGGCCGTCGACAACGAATTCAACCGCG
AGAGAGAGGCCGTCAAGCACCACGCTGCTGCTACCAGTGATCTGTGGCGC
AAGCTCTCCATCTACGCCGTCATTCCTGTCCTGATTGCCGGAGGTATCAA
CGCCTACAACCTTTGGACTGAGCACTGGGAACACTGGGCGCACATGCCCC
CGCTCGAGGAGCGTACCGAGTACCCCTACCAGAACATCCGTGTGAAGAAC
TTCCCCTGGGGAGACGGTGACAAGACCATCTTCTGGAACTCCGACGTCAA
CTACCACAACAAGGACAAGGCTACCTAAATGTTCCCTCAGCGCAACGCCC
TTCGTCTGTCTCAGCGCGCTGCCCAGCAGCTGCGTGCTGCTCCGGTTCGC
TCCACCGTCCAGCGCCGTCTCAACAGCTCCGACTCCAAGCTCCCCTCTTG
GGCCGTCGACAACGAATTCAACCGCGAGAGAGAGGCCGTCAAGCACCACG
CTGCTGCTACCAGTGATCTGTGGCGCAAGCTCTCCATCTACGCCGTCATT
CCTGTCCTGATTGCCGGAGGTATCAACGCCTACAACCTTTGGACTGAGCA
CTGGGAACACTGGGCGCACATGCCCCCGCTCGAGGAGCGTACCGAGTACC
CCTACCAGAACATCCGTGTGAAGAACTTCCCCTGGGGAGACGGTGACAAG
ACCATCTTCTGGAACTCCGACGTCAACTACCACAACAAGGACAAGGCTAC
CTAAATGTTCCCTCAGCGCAACGCCCTTCGTCTGTCTCAGCGCGCTGCCC
AGCAGCTGCGTGCTGCTCCGGTTCGCTCCACCGTCCAGCGCCGTCTCAAC
AGCTCCGACTCCAAGCTCCCCTCTTGGGCCGTCGACAACGAATTCAACCG
CGAGAGAGAGGCCGTCAAGCACCACGCTGCTGCTACCAGTGATCTGTGGC
GCAAGCTCTCCATCTACGCCGTCATTCCTGTCCTGATTGCCGGAGGTATC
AACGCCTACAACCTTTGGACTGAGCACTGGGAACACTGGGCGCACATGCC
CCCGCTCGAGGAGCGTACCGAGTACCCCTACCAGAACATCCGTGTGAAGA
ACTTCCCCTGGGGAGACGGTGACAAGACCATCTTCTGGAACTCCGACGTC
AACTACCACAACAAGGACAAGGCTACCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005743mitochondrial inner membrane
GO:0005751mitochondrial respiratory chain complex IV
Vocabulary: Molecular Function
TermDefinition
GO:0004129cytochrome-c oxidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_209100ASPNIDRAFT_209100Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_209100-T1ASPNIDRAFT_209100-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_209100-T1.utr5p1ASPNIDRAFT_209100-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_209100-T1.exon1ASPNIDRAFT_209100-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_209100-T1.exon2ASPNIDRAFT_209100-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_209100-T1.exon3ASPNIDRAFT_209100-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_209100-T1.exon4ASPNIDRAFT_209100-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_209100-T1.exon5ASPNIDRAFT_209100-T1.exon5Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_209100-T1.cdsASPNIDRAFT_209100-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_209100-T1.utr3p1ASPNIDRAFT_209100-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG092654RM
DBxrefInterPro:IPR018507
DBxrefInterPro:IPR036418
DBxrefInterPro:IPR001349
DBxrefPFAM:PF02046
Productcytochrome C oxidase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000019.1supercontigACJE01000019.1:2519736..2520653 +
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