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ASPNIDRAFT_209921-T1, ASPNIDRAFT_209921-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_209921-T1
Unique NameASPNIDRAFT_209921-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000008.1:7836..8923-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_209921-T1 ID=ASPNIDRAFT_209921-T1|Name=ASPNIDRAFT_209921-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1088bp|location=Sequence derived from alignment at ACJE01000008.1:7836..8923- (Aspergillus niger ATCC 1015)
GTCTAGAGTACCATCTATTCAATTCTTCCAATCATTGAATTTAACCATGG
CATTATTCCTCAACTCTCGGCTACTCAAATGCACTGGCAGACAATTCCAG
GTAATCTTTCCTCACCCCATCCGGCTCTTTCGGCGAAGTCATATTAATAG
CTTTCAGTTACTAGCAGGTTTTAGAGGCTACAGCACTTTCTCTGACATAA
CCCATCATGCACAGCCAGCGAGCGATTCCCTCCACCCAGCAGCCTCGGCT
GAATCCAGTGCACTGTTAGCGCTCTCACGACTACCTTGAACAACCAGGAG
AGCTAACTTGTGTTCTTACAGACAATCGACCGAACTGCAAACGAAACAAT
GGTCTGAACTTTGACTGATAATTCCAATAAATTGGTCTCGATGACATGCG
CTTACTCATGATTAGGAGGGAACGCCTTGAGAGCATTAATAGTAAGGCTC
GACTTCCCAGGAGCGTTCAAGCTGTGTACCTACGACCCCTCCGGAGGAAG
GCCGAGTTTGGCCTTCCAGTCTGTGATCTTCAGTTGAGATCTTACAGTGT
ACGGAACGTCGAATTTTTCGCCGATTTTGCTGTGCGGGCCGCTTACTACC
TGAACCTTCCTGTCTCGGGGCCGGTGCCCTTGCCACGAATCGTTGAACGA
TGGACCGTCCCTAGAAGTAACTTCGTGCACAAAAAGAGTCAGGAGAATTT
TGAAAGAATAACACTTCGACGCTTGGTACAAATCAAAGACGGCAACCCTC
AAGTTGTACAGACATGGCTAGCATTCTTGCGCAAGCATGCTTTCTATGGA
GTCGGCATGAAAGCAAATGTCTGGGAACATGAAAGCCTCGGTATATTGCT
ATTCTCATCTCGCTTTGTCCTGGTCACTGTTTGCCACGTCACTAACGATA
TCGTGGACACAGATGTAGCTGCAAACATGGACAGCACTCTTCCAGAAGTC
AAGAAGACGCTTGAGCCTTACCTTTCACAATTTGGTCAGCGGCAAGATGC
AACATCTCATGACTCTATCTTAGACATCCTGGACAACGAACGCTTCGTTG
CATACAAGGGCCCTTTAACTACAGCACGCAAGGCATAA
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Coding sequence (CDS) from alignment at ACJE01000008.1:7836..8923-

>ASPNIDRAFT_209921-T1 ID=ASPNIDRAFT_209921-T1|Name=ASPNIDRAFT_209921-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3960bp|location=Sequence derived from alignment at ACJE01000008.1:7836..8923- (Aspergillus niger ATCC 1015)
ATGTAGCTGCAAACATGGACAGCACTCTTCCAGAAGTCAAGAAGACGCTT
GAGCCTTACCTTTCACAATTTGGTCAGCGGCAAGATGCAACATCTCATGA
CTCTATCTTAGACATCCTGGACAACGAACGCTTCGTTGCATACAAGGGCC
CTTTAACTACAGCACGCAAGGCATAAGAGGGAACGCCTTGAGAGCATTAA
TAGTAAGGCTCGACTTCCCAGGAGCGTTCAAGCTGTGTACCTACGACCCC
TCCGGAGGAAGGCCGAGTTTGGCCTTCCAGTCTGTGATCTTCAGTTGAGA
TCTTACAGTGTACGGAACGTCGAATTTTTCGCCGATTTTGCTGTGCGGGC
CGCTTACTACCTGAACCTTCCTGTCTCGGGGCCGGTGCCCTTGCCACGAA
TCGTTGAACGATGGACCGTCCCTAGAAGTAACTTCGTGCACAAAAAGAGT
CAGGAGAATTTTGAAAGAATAACACTTCGACGCTTGGTACAAATCAAAGA
CGGCAACCCTCAAGTTGTACAGACATGGCTAGCATTCTTGCGCAAGCATG
CTTTCTATGGAGTCGGCATGAAAGCAAATGTCTGGGAACATGAAAGCCTC
GACAATCGACCGAACTGCAAACGAAACAATGTTACTAGCAGGTTTTAGAG
GCTACAGCACTTTCTCTGACATAACCCATCATGCACAGCCAGCGAGCGAT
TCCCTCCACCCAGCAGCCTCGGCTGAATCCAGTGCACTATGGCATTATTC
CTCAACTCTCGGCTACTCAAATGCACTGGCAGACAATTCCAGATGTAGCT
GCAAACATGGACAGCACTCTTCCAGAAGTCAAGAAGACGCTTGAGCCTTA
CCTTTCACAATTTGGTCAGCGGCAAGATGCAACATCTCATGACTCTATCT
TAGACATCCTGGACAACGAACGCTTCGTTGCATACAAGGGCCCTTTAACT
ACAGCACGCAAGGCATAAGAGGGAACGCCTTGAGAGCATTAATAGTAAGG
CTCGACTTCCCAGGAGCGTTCAAGCTGTGTACCTACGACCCCTCCGGAGG
AAGGCCGAGTTTGGCCTTCCAGTCTGTGATCTTCAGTTGAGATCTTACAG
TGTACGGAACGTCGAATTTTTCGCCGATTTTGCTGTGCGGGCCGCTTACT
ACCTGAACCTTCCTGTCTCGGGGCCGGTGCCCTTGCCACGAATCGTTGAA
CGATGGACCGTCCCTAGAAGTAACTTCGTGCACAAAAAGAGTCAGGAGAA
TTTTGAAAGAATAACACTTCGACGCTTGGTACAAATCAAAGACGGCAACC
CTCAAGTTGTACAGACATGGCTAGCATTCTTGCGCAAGCATGCTTTCTAT
GGAGTCGGCATGAAAGCAAATGTCTGGGAACATGAAAGCCTCGACAATCG
ACCGAACTGCAAACGAAACAATGTTACTAGCAGGTTTTAGAGGCTACAGC
ACTTTCTCTGACATAACCCATCATGCACAGCCAGCGAGCGATTCCCTCCA
CCCAGCAGCCTCGGCTGAATCCAGTGCACTATGGCATTATTCCTCAACTC
TCGGCTACTCAAATGCACTGGCAGACAATTCCAGATGTAGCTGCAAACAT
GGACAGCACTCTTCCAGAAGTCAAGAAGACGCTTGAGCCTTACCTTTCAC
AATTTGGTCAGCGGCAAGATGCAACATCTCATGACTCTATCTTAGACATC
CTGGACAACGAACGCTTCGTTGCATACAAGGGCCCTTTAACTACAGCACG
CAAGGCATAAGAGGGAACGCCTTGAGAGCATTAATAGTAAGGCTCGACTT
CCCAGGAGCGTTCAAGCTGTGTACCTACGACCCCTCCGGAGGAAGGCCGA
GTTTGGCCTTCCAGTCTGTGATCTTCAGTTGAGATCTTACAGTGTACGGA
ACGTCGAATTTTTCGCCGATTTTGCTGTGCGGGCCGCTTACTACCTGAAC
CTTCCTGTCTCGGGGCCGGTGCCCTTGCCACGAATCGTTGAACGATGGAC
CGTCCCTAGAAGTAACTTCGTGCACAAAAAGAGTCAGGAGAATTTTGAAA
GAATAACACTTCGACGCTTGGTACAAATCAAAGACGGCAACCCTCAAGTT
GTACAGACATGGCTAGCATTCTTGCGCAAGCATGCTTTCTATGGAGTCGG
CATGAAAGCAAATGTCTGGGAACATGAAAGCCTCGACAATCGACCGAACT
GCAAACGAAACAATGTTACTAGCAGGTTTTAGAGGCTACAGCACTTTCTC
TGACATAACCCATCATGCACAGCCAGCGAGCGATTCCCTCCACCCAGCAG
CCTCGGCTGAATCCAGTGCACTATGGCATTATTCCTCAACTCTCGGCTAC
TCAAATGCACTGGCAGACAATTCCAGATGTAGCTGCAAACATGGACAGCA
CTCTTCCAGAAGTCAAGAAGACGCTTGAGCCTTACCTTTCACAATTTGGT
CAGCGGCAAGATGCAACATCTCATGACTCTATCTTAGACATCCTGGACAA
CGAACGCTTCGTTGCATACAAGGGCCCTTTAACTACAGCACGCAAGGCAT
AAGAGGGAACGCCTTGAGAGCATTAATAGTAAGGCTCGACTTCCCAGGAG
CGTTCAAGCTGTGTACCTACGACCCCTCCGGAGGAAGGCCGAGTTTGGCC
TTCCAGTCTGTGATCTTCAGTTGAGATCTTACAGTGTACGGAACGTCGAA
TTTTTCGCCGATTTTGCTGTGCGGGCCGCTTACTACCTGAACCTTCCTGT
CTCGGGGCCGGTGCCCTTGCCACGAATCGTTGAACGATGGACCGTCCCTA
GAAGTAACTTCGTGCACAAAAAGAGTCAGGAGAATTTTGAAAGAATAACA
CTTCGACGCTTGGTACAAATCAAAGACGGCAACCCTCAAGTTGTACAGAC
ATGGCTAGCATTCTTGCGCAAGCATGCTTTCTATGGAGTCGGCATGAAAG
CAAATGTCTGGGAACATGAAAGCCTCGACAATCGACCGAACTGCAAACGA
AACAATGTTACTAGCAGGTTTTAGAGGCTACAGCACTTTCTCTGACATAA
CCCATCATGCACAGCCAGCGAGCGATTCCCTCCACCCAGCAGCCTCGGCT
GAATCCAGTGCACTATGGCATTATTCCTCAACTCTCGGCTACTCAAATGC
ACTGGCAGACAATTCCAGATGTAGCTGCAAACATGGACAGCACTCTTCCA
GAAGTCAAGAAGACGCTTGAGCCTTACCTTTCACAATTTGGTCAGCGGCA
AGATGCAACATCTCATGACTCTATCTTAGACATCCTGGACAACGAACGCT
TCGTTGCATACAAGGGCCCTTTAACTACAGCACGCAAGGCATAAGAGGGA
ACGCCTTGAGAGCATTAATAGTAAGGCTCGACTTCCCAGGAGCGTTCAAG
CTGTGTACCTACGACCCCTCCGGAGGAAGGCCGAGTTTGGCCTTCCAGTC
TGTGATCTTCAGTTGAGATCTTACAGTGTACGGAACGTCGAATTTTTCGC
CGATTTTGCTGTGCGGGCCGCTTACTACCTGAACCTTCCTGTCTCGGGGC
CGGTGCCCTTGCCACGAATCGTTGAACGATGGACCGTCCCTAGAAGTAAC
TTCGTGCACAAAAAGAGTCAGGAGAATTTTGAAAGAATAACACTTCGACG
CTTGGTACAAATCAAAGACGGCAACCCTCAAGTTGTACAGACATGGCTAG
CATTCTTGCGCAAGCATGCTTTCTATGGAGTCGGCATGAAAGCAAATGTC
TGGGAACATGAAAGCCTCGACAATCGACCGAACTGCAAACGAAACAATGT
TACTAGCAGGTTTTAGAGGCTACAGCACTTTCTCTGACATAACCCATCAT
GCACAGCCAGCGAGCGATTCCCTCCACCCAGCAGCCTCGGCTGAATCCAG
TGCACTATGGCATTATTCCTCAACTCTCGGCTACTCAAATGCACTGGCAG
ACAATTCCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RSM10ASPNIDRAFT_209921Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_209921-T1ASPNIDRAFT_209921-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_209921-T1.cdsASPNIDRAFT_209921-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_209921-T1.exon5ASPNIDRAFT_209921-T1.exon5Aspergillus niger ATCC 1015exon
ASPNIDRAFT_209921-T1.exon4ASPNIDRAFT_209921-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_209921-T1.exon3ASPNIDRAFT_209921-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_209921-T1.exon2ASPNIDRAFT_209921-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_209921-T1.exon1ASPNIDRAFT_209921-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_209921-T1.utr5p1ASPNIDRAFT_209921-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR001848
DBxrefInterPro:IPR036838
DBxrefInterPro:IPR027486
DBxrefPFAM:PF00338
Productmitochondrial 37S ribosomal protein rsm10
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000008.1supercontigACJE01000008.1:7836..8923 -
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