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ASPNIDRAFT_210303-T1, ASPNIDRAFT_210303-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_210303-T1
Unique NameASPNIDRAFT_210303-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000008.1:1490463..1491961-

Legend: CDSpolypeptideexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_210303-T1 ID=ASPNIDRAFT_210303-T1|Name=ASPNIDRAFT_210303-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1499bp|location=Sequence derived from alignment at ACJE01000008.1:1490463..1491961- (Aspergillus niger ATCC 1015)
ATGGCCATCAACTCTGCCCCCGAGTCCTCCCTCCTTTCCCTCCTCTACCG
CTCCTACCCTACCGCCATCTCCCCCGACGCCACGGAGCCCGACCTTCACA
CGGCCACCCCCAAAATCTTTCCGCAGACTAGCTTTTCCGTCGCCGAAGAG
GCCGACGTCAAGCAATGGCTGGCCACCATCTCCGGTCTGCAGACCGCTCT
CAGCAAGGATGACAAGCCCGTCGTCTCGACCATCCTCTCCCAGCTGAACT
CTCACCTCGCCACCCGCACAACCCTGCTCGGTGCGAAGCCCTCCGTGGCT
GATATTGCCGTCTACGCTCTCGTCGCTCCTCTCGTCGAGAAATGGACCCC
CGAGGAGCGTACCGGCGAGCAGGGCTACCACCACATCGTCCGTCACGTCG
ACTTCGTCCAGAACAGCCGCATTTTCGCTCTACAGATCCCCGACGAGGAG
AAGGTCACCATTGACGTGAACGACGTTCGCTTCGTGCCCAAGCCCGTCGA
CCCCAAGGAGGAGAAGGAGCGCAAGAAGAAGGAGAAGGCCGCTGCCCAGA
AGCCCGAGGCTGCTGGCAAGCCCCTCGTTGTCGGTCAGGGCAAGCCCGAG
GCTGCGGCCAAGGCCGACGGTGCTAAGGGTGACGCCGCCGCCGCTGCTAA
GCCCGAGGGCAAGCCCAAGAAGGAGAAGAAGGAAAAGAAGGAGAAGCCGG
CCAAGGCTGCGCCCGCCCCTGCTGCTCCCCCGTCTCCCTCCGTCATTGAC
CTCCGTGTTGGTCACATTCTTCGTGCCGTCAACCACCCCAACGCCGACTC
CCTCTACGTCTCGACCATCGACTGCGGTGACGCCCCGGGCACCGAGAACA
CCTCTCTGGATGAGGCCACAGGCAAGACCGTCCGCACGGTGTGCTCCGGC
CTGAACGGTCTGATTCCCCTGGAGGAGATGCAGAACCGCAAGATTGTCGC
CGTCTGCAACCTGAAGCCCGTCACCATGCGTGGCATCAAGTCCTGCGCCA
TGGTTTTGGCTGCCTCTCCCCGCGTGGCTGAGGGCGAGGACTCGCACGCT
GGACCCGTCGAGCTCGTTTCGCCTCCTGCCGATGCCCCTGCCGGTGAGCG
CGTGTGCTTCGAGGGCTGGACCGAGGGTGAGCCCGAGAAGGTGCTCAACC
CTAAGAAGAAGGTCTGGGAGACCTACCAGCCTGGTTTCACCACCACCGAT
GACCTCGAGGTCGCCTTTGAGATGTCTGCCGTTCCGGCCGTGCAGGGCCA
GGAGGGCAAGCCCGCTCTGGGTAAGTTGAAGACGCAGTCCGGTGGACTTT
GCACAGTCAAGAGCCTGAAGGGAGCGGCTGTCCGGTAAGGGATTAATTGA
ATTGGGGAGAGATACAAAAGGCAGTTTCAATAGGAAGAAAAGAAAAAAGA
GGGCTGCTCTAATCAAAAACGTAAATAGTCAGTTATGATTGATAGCGCCA
TTGCGAGTTAGACGAGAAATGGGAATGATATATCGATATTAATCCACAC
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Coding sequence (CDS) from alignment at ACJE01000008.1:1490463..1491961-

>ASPNIDRAFT_210303-T1 ID=ASPNIDRAFT_210303-T1|Name=ASPNIDRAFT_210303-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1338bp|location=Sequence derived from alignment at ACJE01000008.1:1490463..1491961- (Aspergillus niger ATCC 1015)
ATGGCCATCAACTCTGCCCCCGAGTCCTCCCTCCTTTCCCTCCTCTACCG
CTCCTACCCTACCGCCATCTCCCCCGACGCCACGGAGCCCGACCTTCACA
CGGCCACCCCCAAAATCTTTCCGCAGACTAGCTTTTCCGTCGCCGAAGAG
GCCGACGTCAAGCAATGGCTGGCCACCATCTCCGGTCTGCAGACCGCTCT
CAGCAAGGATGACAAGCCCGTCGTCTCGACCATCCTCTCCCAGCTGAACT
CTCACCTCGCCACCCGCACAACCCTGCTCGGTGCGAAGCCCTCCGTGGCT
GATATTGCCGTCTACGCTCTCGTCGCTCCTCTCGTCGAGAAATGGACCCC
CGAGGAGCGTACCGGCGAGCAGGGCTACCACCACATCGTCCGTCACGTCG
ACTTCGTCCAGAACAGCCGCATTTTCGCTCTACAGATCCCCGACGAGGAG
AAGGTCACCATTGACGTGAACGACGTTCGCTTCGTGCCCAAGCCCGTCGA
CCCCAAGGAGGAGAAGGAGCGCAAGAAGAAGGAGAAGGCCGCTGCCCAGA
AGCCCGAGGCTGCTGGCAAGCCCCTCGTTGTCGGTCAGGGCAAGCCCGAG
GCTGCGGCCAAGGCCGACGGTGCTAAGGGTGACGCCGCCGCCGCTGCTAA
GCCCGAGGGCAAGCCCAAGAAGGAGAAGAAGGAAAAGAAGGAGAAGCCGG
CCAAGGCTGCGCCCGCCCCTGCTGCTCCCCCGTCTCCCTCCGTCATTGAC
CTCCGTGTTGGTCACATTCTTCGTGCCGTCAACCACCCCAACGCCGACTC
CCTCTACGTCTCGACCATCGACTGCGGTGACGCCCCGGGCACCGAGAACA
CCTCTCTGGATGAGGCCACAGGCAAGACCGTCCGCACGGTGTGCTCCGGC
CTGAACGGTCTGATTCCCCTGGAGGAGATGCAGAACCGCAAGATTGTCGC
CGTCTGCAACCTGAAGCCCGTCACCATGCGTGGCATCAAGTCCTGCGCCA
TGGTTTTGGCTGCCTCTCCCCGCGTGGCTGAGGGCGAGGACTCGCACGCT
GGACCCGTCGAGCTCGTTTCGCCTCCTGCCGATGCCCCTGCCGGTGAGCG
CGTGTGCTTCGAGGGCTGGACCGAGGGTGAGCCCGAGAAGGTGCTCAACC
CTAAGAAGAAGGTCTGGGAGACCTACCAGCCTGGTTTCACCACCACCGAT
GACCTCGAGGTCGCCTTTGAGATGTCTGCCGTTCCGGCCGTGCAGGGCCA
GGAGGGCAAGCCCGCTCTGGGTAAGTTGAAGACGCAGTCCGGTGGACTTT
GCACAGTCAAGAGCCTGAAGGGAGCGGCTGTCCGGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0000049tRNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210303ASPNIDRAFT_210303Aspergillus niger ATCC 1015gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210303-T1.cdsASPNIDRAFT_210303-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210303-T1.utr3p1ASPNIDRAFT_210303-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210303-T1.exon1ASPNIDRAFT_210303-T1.exon1Aspergillus niger ATCC 1015exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210303-T1ASPNIDRAFT_210303-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09263JFQ
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR036282
DBxrefInterPro:IPR002547
DBxrefPFAM:PF01588
Productamino acyl-tRNA synthetase complex component
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000008.1supercontigACJE01000008.1:1490463..1491961 -
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