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ASPNIDRAFT_210814-T1, ASPNIDRAFT_210814-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_210814-T1
Unique NameASPNIDRAFT_210814-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000002.1:6547..8125+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_210814-T1 ID=ASPNIDRAFT_210814-T1|Name=ASPNIDRAFT_210814-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1579bp|location=Sequence derived from alignment at ACJE01000002.1:6547..8125+ (Aspergillus niger ATCC 1015)
AGCAATTATATCACAAAGGTAAGTCCGCGTTACTATTGTCTTCGATTGAG
ATTATCCCTCTGGCAACTTTCCGAAATCCAACGTGTCCAACGTCACCGAT
TCTTACTTCAACACAAGGTCTCCGATACAACACCTGTCTTGTCCCGTCCC
GTCCCCTGACCCCATTCTCCGGACCGGCTCCTGGTTCCGTGGAAGATCCT
GAATCCAGCACCTGCCACTATTCGAAGACGAGCTTTCTTGCTGTCAATAT
TATTGACAGAGCCAAGCAGATAAACTCAGTGAAGTGAAGCTTTGGTTCCA
GTCAATACCAAATTGTCGAGAAACCATAAGCGGGACCGGAAGGGATAGGA
GAAAAGAGAGGGGGCACGCAAGACCAACAGAGGGAGAGGGGAGAATAACG
TCAGACCCAACTAAGACGATTATCGAGCAGGGGCCAGCACAACGCAGAAC
TTGAGTCACTATCACGGCTATTATCCCTCGCCCTCTGTTTACCTCGAGTC
TGCAACAACAAAGATGGCTGGTACAAGGAACTACGACTTTCTGGTAAGTA
TTGACTAAACTCCCAAGAAACCATAAGCTAAATGTCGGTCTTTGTAGATC
AAGTTACTACTTATTGGGGACTCTGGGGTGGGAAAGTCATGCTGTCTATT
GCGATTCAGTGAAGACTCGTTCACTCCGTCGTTCATCACTACCATCGGAA
TCGACTTCAAAATACGTACCATCGAATTGGACGGTAAAAGAGTAAAGCTC
CAGATATGGGATACAGCTGGGCAAGAGCGATTTAGAACTATCACTACTGC
TTACTACAGAGGAGCCATGGGCATTCTTCTTGTATACGATGTCACTGATG
AAAGATCATTCCAAAGTGAGAAACGCCTTCCTTAAACCTGAGGTGGGTCA
TAAGATAATTTGATGCTAATGCCCAATCACCTTAGACATTCGCACCTGGT
TCTCAAATGTCGAACAACATGCGAGCGAAGGCGTTCACAAGATCCTTATT
GGCAACAAATGTGATTGGGAAGAGAAGAGGGCTGTGTCAACCGAGCAAGG
GCAGCAATTGGCTAATGAGCTGGGAATACCATTCCTTGAAGTATCGGCTA
AGAACAACATCAACATCGAGAAAGCGTTTTATGATCTCGCATCCGACATC
AAAAAAGGAATGGATACGTCGAAGTCTGAACAGGTCGGCTCTCAGGGCGT
GAGCATAGACCAGCAAGGTTCCGGGTTGAATGGCAGCGCAGGTGGGAAGT
GCTGTTGAATAGATAGTGCACCCTCATTTGGTCTTCGGGTTATATCTTTC
CATCATGACTCTATGTCTTTGCGCGTTACAGGTTTGTGTCATGGCTTCAG
TACATCATTACGTTCACGGTTCGAATAGATGCTGGGAAGCTAATTGGCTG
ATTCTGCTCCTATCCTATGTATGTTGATAATGATGGCAGGGGCTTATGGT
TTTCGTGATTGCCTTTATCCTTCTTTCTGTTCTGTCTTGGGTTCTCATCC
ATTTACTGCGATCGAACTTTCCCAGGTGGCGTTATTCTGTTATATTCATA
ACTGTGCAAATGATATTCGGTATGGCCAT
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Coding sequence (CDS) from alignment at ACJE01000002.1:6547..8125+

>ASPNIDRAFT_210814-T1 ID=ASPNIDRAFT_210814-T1|Name=ASPNIDRAFT_210814-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1863bp|location=Sequence derived from alignment at ACJE01000002.1:6547..8125+ (Aspergillus niger ATCC 1015)
ATGGCTGGTACAAGGAACTACGACTTTCTGATCAAGTTACTACTTATTGG
GGACTCTGGGGTGGGAAAGTCATGCTGTCTATTGCGATTCAGTGAAGACT
CGTTCACTCCGTCGTTCATCACTACCATCGGAATCGACTTCAAAATACGT
ACCATCGAATTGGACGGTAAAAGAGTAAAGCTCCAGATATGGGATACAGC
TGGGCAAGAGCGATTTAGAACTATCACTACTGCTTACTACAGAGGAGCCA
TGGGCATTCTTCTTGTATACGATGTCACTGATGAAAGATCATTCCAAAAC
ATTCGCACCTGGTTCTCAAATGTCGAACAACATGCGAGCGAAGGCGTTCA
CAAGATCCTTATTGGCAACAAATGTGATTGGGAAGAGAAGAGGGCTGTGT
CAACCGAGCAAGGGCAGCAATTGGCTAATGAGCTGGGAATACCATTCCTT
GAAGTATCGGCTAAGAACAACATCAACATCGAGAAAGCGTTTTATGATCT
CGCATCCGACATCAAAAAAGGAATGGATACGTCGAAGTCTGAACAGGTCG
GCTCTCAGGGCGTGAGCATAGACCAGCAAGGTTCCGGGTTGAATGGCAGC
GCAGGTGGGAAGTGCTGTTGAATGGCTGGTACAAGGAACTACGACTTTCT
GATCAAGTTACTACTTATTGGGGACTCTGGGGTGGGAAAGTCATGCTGTC
TATTGCGATTCAGTGAAGACTCGTTCACTCCGTCGTTCATCACTACCATC
GGAATCGACTTCAAAATACGTACCATCGAATTGGACGGTAAAAGAGTAAA
GCTCCAGATATGGGATACAGCTGGGCAAGAGCGATTTAGAACTATCACTA
CTGCTTACTACAGAGGAGCCATGGGCATTCTTCTTGTATACGATGTCACT
GATGAAAGATCATTCCAAAACATTCGCACCTGGTTCTCAAATGTCGAACA
ACATGCGAGCGAAGGCGTTCACAAGATCCTTATTGGCAACAAATGTGATT
GGGAAGAGAAGAGGGCTGTGTCAACCGAGCAAGGGCAGCAATTGGCTAAT
GAGCTGGGAATACCATTCCTTGAAGTATCGGCTAAGAACAACATCAACAT
CGAGAAAGCGTTTTATGATCTCGCATCCGACATCAAAAAAGGAATGGATA
CGTCGAAGTCTGAACAGGTCGGCTCTCAGGGCGTGAGCATAGACCAGCAA
GGTTCCGGGTTGAATGGCAGCGCAGGTGGGAAGTGCTGTTGAATGGCTGG
TACAAGGAACTACGACTTTCTGATCAAGTTACTACTTATTGGGGACTCTG
GGGTGGGAAAGTCATGCTGTCTATTGCGATTCAGTGAAGACTCGTTCACT
CCGTCGTTCATCACTACCATCGGAATCGACTTCAAAATACGTACCATCGA
ATTGGACGGTAAAAGAGTAAAGCTCCAGATATGGGATACAGCTGGGCAAG
AGCGATTTAGAACTATCACTACTGCTTACTACAGAGGAGCCATGGGCATT
CTTCTTGTATACGATGTCACTGATGAAAGATCATTCCAAAACATTCGCAC
CTGGTTCTCAAATGTCGAACAACATGCGAGCGAAGGCGTTCACAAGATCC
TTATTGGCAACAAATGTGATTGGGAAGAGAAGAGGGCTGTGTCAACCGAG
CAAGGGCAGCAATTGGCTAATGAGCTGGGAATACCATTCCTTGAAGTATC
GGCTAAGAACAACATCAACATCGAGAAAGCGTTTTATGATCTCGCATCCG
ACATCAAAAAAGGAATGGATACGTCGAAGTCTGAACAGGTCGGCTCTCAG
GGCGTGAGCATAGACCAGCAAGGTTCCGGGTTGAATGGCAGCGCAGGTGG
GAAGTGCTGTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
YPT2ASPNIDRAFT_210814Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210814-T1ASPNIDRAFT_210814-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210814-T1.utr5p1ASPNIDRAFT_210814-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR
ASPNIDRAFT_210814-T1.utr5p2ASPNIDRAFT_210814-T1.utr5p2Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210814-T1.exon1ASPNIDRAFT_210814-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_210814-T1.exon2ASPNIDRAFT_210814-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_210814-T1.exon3ASPNIDRAFT_210814-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_210814-T1.exon4ASPNIDRAFT_210814-T1.exon4Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210814-T1.cdsASPNIDRAFT_210814-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210814-T1.utr3p1ASPNIDRAFT_210814-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR001806
DBxrefInterPro:IPR005225
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF04670
DBxrefPFAM:PF00025
ProductGTPase Ypt2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000002.1supercontigACJE01000002.1:6547..8125 +
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