You are here

Home

ASPNIDRAFT_210854-T1, ASPNIDRAFT_210854-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_210854-T1
Unique NameASPNIDRAFT_210854-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000002.1:78120..79297-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_210854-T1 ID=ASPNIDRAFT_210854-T1|Name=ASPNIDRAFT_210854-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1178bp|location=Sequence derived from alignment at ACJE01000002.1:78120..79297- (Aspergillus niger ATCC 1015)
AGTATCTTCACCTATCCATCTCACTTGTACACCCCCCTCACCTCGGGTCA
AGCCTCTTGATCATCTCCAACTCTACTACTTATCATATATCCTCAATCGG
TCAATTCCTGCGAACCCCTCGCACCCGCCGTCAAAATGCCGCAGAAGGTT
TATGTCACGTACAACCAGGTATGCAGTTGCCTTTGAAATCTCTACATTTC
CCTTTCAATCCCTTGCAGCCACATGTAGATGATCGTGGGGTTTCGTGCTT
GTGTGAGGGCTTGTCTGCCATTAACGGCCTAGCATGCACATACTTCTCTG
GTTCATTTGGCCACATGCCCACGTCGCAGCCTAGCTTGGCCGTCGCACAC
TCGTCCGTTCACTTGAAAAACAATCCGCTAACATCCGAATGTCCTTGGCA
GGTTCACAAACTATGCCAGGCCTCCGCTGACAAGATCCTGGACACCTTCC
AGCCCAATCTTATGATTGCTATCGGCGGTGGTGGCTACATCCCTGCCCGC
ATTCTCCGGTTCGTCGGATCAAAACCACAACTTGATTTTGGAACCCGTTT
CTGACGCATATCCTTCACACAGCTCTTTCCTGAAGCGCCCCGGCGAGCCT
AACATTCCCATTCAGGCCATCGGTCTTTCGCTTTACGAGGACCTGGGCCG
CGGTGACGCCGAAGAAGTCCCCGGAACCAAGGTTACCCGCACACAATGGC
TGGACCTTAGCTCTCTGGAAATGGCCAACCTCATTGGCAAGAACATTCTC
ATTGTTGACGAAGTCGACGATACCCGCACGACCCTCGAATATGCCGTCCG
CGAGCTCCAGAAGGATGTCGAGATTGCGCAGAAGCAGCTCGGCCGTGAAG
GCGAGAAGACAAACTTCTTCGTCTACGTTGTTCACGTACGTTTATCATTA
CGATATATCAATTTCGCCGAACCTATCGTCTCCACATGACTAACAATCTC
TTCAGAATAAGGACAAGCCGAAGAAGGGTGTCTTGCCGGAGGATATGATG
ACCTCTGGCCGTTACCACGCATCCGTGACCACCGCTGATGTTTGGATCTG
CTATCCTTGGGAAGCTAAGTACGTCATCCGATACAGTACCAGGCTTGGAA
GTCCCAATGCTAACATATACATTTCACAGGGACATTGACGAGCACGACAG
ACTAGCTGAGGAGAACCCTCTCGTCTGA
back to top

Coding sequence (CDS) from alignment at ACJE01000002.1:78120..79297-

>ASPNIDRAFT_210854-T1 ID=ASPNIDRAFT_210854-T1|Name=ASPNIDRAFT_210854-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3075bp|location=Sequence derived from alignment at ACJE01000002.1:78120..79297- (Aspergillus niger ATCC 1015)
GGACATTGACGAGCACGACAGACTAGCTGAGGAGAACCCTCTCGTCTGAA
ATAAGGACAAGCCGAAGAAGGGTGTCTTGCCGGAGGATATGATGACCTCT
GGCCGTTACCACGCATCCGTGACCACCGCTGATGTTTGGATCTGCTATCC
TTGGGAAGCTAACTCTTTCCTGAAGCGCCCCGGCGAGCCTAACATTCCCA
TTCAGGCCATCGGTCTTTCGCTTTACGAGGACCTGGGCCGCGGTGACGCC
GAAGAAGTCCCCGGAACCAAGGTTACCCGCACACAATGGCTGGACCTTAG
CTCTCTGGAAATGGCCAACCTCATTGGCAAGAACATTCTCATTGTTGACG
AAGTCGACGATACCCGCACGACCCTCGAATATGCCGTCCGCGAGCTCCAG
AAGGATGTCGAGATTGCGCAGAAGCAGCTCGGCCGTGAAGGCGAGAAGAC
AAACTTCTTCGTCTACGTTGTTCACGTTCACAAACTATGCCAGGCCTCCG
CTGACAAGATCCTGGACACCTTCCAGCCCAATCTTATGATTGCTATCGGC
GGTGGTGGCTACATCCCTGCCCGCATTCTCCGATGCCGCAGAAGGTTTAT
GTCACGTACAACCAGGGACATTGACGAGCACGACAGACTAGCTGAGGAGA
ACCCTCTCGTCTGAAATAAGGACAAGCCGAAGAAGGGTGTCTTGCCGGAG
GATATGATGACCTCTGGCCGTTACCACGCATCCGTGACCACCGCTGATGT
TTGGATCTGCTATCCTTGGGAAGCTAACTCTTTCCTGAAGCGCCCCGGCG
AGCCTAACATTCCCATTCAGGCCATCGGTCTTTCGCTTTACGAGGACCTG
GGCCGCGGTGACGCCGAAGAAGTCCCCGGAACCAAGGTTACCCGCACACA
ATGGCTGGACCTTAGCTCTCTGGAAATGGCCAACCTCATTGGCAAGAACA
TTCTCATTGTTGACGAAGTCGACGATACCCGCACGACCCTCGAATATGCC
GTCCGCGAGCTCCAGAAGGATGTCGAGATTGCGCAGAAGCAGCTCGGCCG
TGAAGGCGAGAAGACAAACTTCTTCGTCTACGTTGTTCACGTTCACAAAC
TATGCCAGGCCTCCGCTGACAAGATCCTGGACACCTTCCAGCCCAATCTT
ATGATTGCTATCGGCGGTGGTGGCTACATCCCTGCCCGCATTCTCCGATG
CCGCAGAAGGTTTATGTCACGTACAACCAGGGACATTGACGAGCACGACA
GACTAGCTGAGGAGAACCCTCTCGTCTGAAATAAGGACAAGCCGAAGAAG
GGTGTCTTGCCGGAGGATATGATGACCTCTGGCCGTTACCACGCATCCGT
GACCACCGCTGATGTTTGGATCTGCTATCCTTGGGAAGCTAACTCTTTCC
TGAAGCGCCCCGGCGAGCCTAACATTCCCATTCAGGCCATCGGTCTTTCG
CTTTACGAGGACCTGGGCCGCGGTGACGCCGAAGAAGTCCCCGGAACCAA
GGTTACCCGCACACAATGGCTGGACCTTAGCTCTCTGGAAATGGCCAACC
TCATTGGCAAGAACATTCTCATTGTTGACGAAGTCGACGATACCCGCACG
ACCCTCGAATATGCCGTCCGCGAGCTCCAGAAGGATGTCGAGATTGCGCA
GAAGCAGCTCGGCCGTGAAGGCGAGAAGACAAACTTCTTCGTCTACGTTG
TTCACGTTCACAAACTATGCCAGGCCTCCGCTGACAAGATCCTGGACACC
TTCCAGCCCAATCTTATGATTGCTATCGGCGGTGGTGGCTACATCCCTGC
CCGCATTCTCCGATGCCGCAGAAGGTTTATGTCACGTACAACCAGGGACA
TTGACGAGCACGACAGACTAGCTGAGGAGAACCCTCTCGTCTGAAATAAG
GACAAGCCGAAGAAGGGTGTCTTGCCGGAGGATATGATGACCTCTGGCCG
TTACCACGCATCCGTGACCACCGCTGATGTTTGGATCTGCTATCCTTGGG
AAGCTAACTCTTTCCTGAAGCGCCCCGGCGAGCCTAACATTCCCATTCAG
GCCATCGGTCTTTCGCTTTACGAGGACCTGGGCCGCGGTGACGCCGAAGA
AGTCCCCGGAACCAAGGTTACCCGCACACAATGGCTGGACCTTAGCTCTC
TGGAAATGGCCAACCTCATTGGCAAGAACATTCTCATTGTTGACGAAGTC
GACGATACCCGCACGACCCTCGAATATGCCGTCCGCGAGCTCCAGAAGGA
TGTCGAGATTGCGCAGAAGCAGCTCGGCCGTGAAGGCGAGAAGACAAACT
TCTTCGTCTACGTTGTTCACGTTCACAAACTATGCCAGGCCTCCGCTGAC
AAGATCCTGGACACCTTCCAGCCCAATCTTATGATTGCTATCGGCGGTGG
TGGCTACATCCCTGCCCGCATTCTCCGATGCCGCAGAAGGTTTATGTCAC
GTACAACCAGGGACATTGACGAGCACGACAGACTAGCTGAGGAGAACCCT
CTCGTCTGAAATAAGGACAAGCCGAAGAAGGGTGTCTTGCCGGAGGATAT
GATGACCTCTGGCCGTTACCACGCATCCGTGACCACCGCTGATGTTTGGA
TCTGCTATCCTTGGGAAGCTAACTCTTTCCTGAAGCGCCCCGGCGAGCCT
AACATTCCCATTCAGGCCATCGGTCTTTCGCTTTACGAGGACCTGGGCCG
CGGTGACGCCGAAGAAGTCCCCGGAACCAAGGTTACCCGCACACAATGGC
TGGACCTTAGCTCTCTGGAAATGGCCAACCTCATTGGCAAGAACATTCTC
ATTGTTGACGAAGTCGACGATACCCGCACGACCCTCGAATATGCCGTCCG
CGAGCTCCAGAAGGATGTCGAGATTGCGCAGAAGCAGCTCGGCCGTGAAG
GCGAGAAGACAAACTTCTTCGTCTACGTTGTTCACGTTCACAAACTATGC
CAGGCCTCCGCTGACAAGATCCTGGACACCTTCCAGCCCAATCTTATGAT
TGCTATCGGCGGTGGTGGCTACATCCCTGCCCGCATTCTCCGATGCCGCA
GAAGGTTTATGTCACGTACAACCAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0009116nucleoside metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
HPT1ASPNIDRAFT_210854Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210854-T1ASPNIDRAFT_210854-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210854-T1.cdsASPNIDRAFT_210854-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210854-T1.exon5ASPNIDRAFT_210854-T1.exon5Aspergillus niger ATCC 1015exon
ASPNIDRAFT_210854-T1.exon4ASPNIDRAFT_210854-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_210854-T1.exon3ASPNIDRAFT_210854-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_210854-T1.exon2ASPNIDRAFT_210854-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_210854-T1.exon1ASPNIDRAFT_210854-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_210854-T1.utr5p1ASPNIDRAFT_210854-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR029057
DBxrefInterPro:IPR000836
Producthypoxanthine-guanine phosphoribosyltransferase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000002.1supercontigACJE01000002.1:78120..79297 -
Powered by Drupal