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ASPNIDRAFT_211156-T1, ASPNIDRAFT_211156-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_211156-T1
Unique NameASPNIDRAFT_211156-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000002.1:1040992..1042125+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_211156-T1 ID=ASPNIDRAFT_211156-T1|Name=ASPNIDRAFT_211156-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1134bp|location=Sequence derived from alignment at ACJE01000002.1:1040992..1042125+ (Aspergillus niger ATCC 1015)
GTACCCCCCTCCACTCTACCCCAGGTATTTCCCATCCTCAATCCCGACGA
ATCGGCCCTCTCGCTGCTGGAGAGTTGCTTTTTGGCGATCAATTGACTCT
AATACGCGCGCACACCCTTAGCACACAATGTTCCTTCGTTCCGTTACTCG
CGCTGCTGCTCGCAGCTCGGCTGTGCCCACCACGGGCCTGCGCTCCTACC
GCACCGTTTCGGGCCCAATGGCTTGCCTGAACGCTCGTCCTCAGACTGAG
AAGAAGTCTATCGCTCCCCAGCAGACCCGCGCCGCCTCCGAGCATGCCAT
CTCGAATCCCACACTCGCCGGTATTGAGAAGCGCTGGGAGGCCATGCCCC
CTCAGGAGCAGGCCGAGCTGTGGATGCAGCTGAGGGACCGCATGAAGGTC
GACTGGCACCAGATGACTCTCCAGGAGAAGAAGGCCGGTATGCTGTTCTT
TCTTGCCCCTTTCCGCTATCTTCCCCGCGTCCAGCAGAATTTTGCTAACA
TGGGCCATTTTTTCTTCTTCCCCACGATTTAGCCTACTGGATCTCCTTCG
GACCCCACGGCCCTCGTTCCGTGCCCCCCAAGGGCGAGAACCTCAAGATC
TTCTTCAAGGTCGCCCAGCTCACCCTCGTCAGCTTTGGTATTTTCTACGT
CATCCACCTGTTCGCCAAGCCCCAGCCCAAGACCATGACCAAGGAGTGGC
AGGAGGCCTCCAATGAGTATGCTAAGGTATGTGAAATCAACAATCTGCAT
CAGTTGCTCGCCAATTGGCGTTGGCTGCACATTGGAACGGTCGCTGATGA
GTATTATCACAACAGCAAGAGAAGATCAACCCTATCTACGGCATCAGCGC
CGAGGGTTACGAGGGCAAGGGCTTCGTCCAGAGCCCCCCTGCTGAGAAGC
AATAGAGTGCCACCGCTCCCCGGGAGGAACAGGTATAACAACGGGGTGTG
CAGTGGATGGGTAGTATTGGGCTACAGGAATGAACTGCTGCCTCCCACCG
CACGACCTTTGATGACGCCGGTTCTGTGCCCATCAATCCTGGACACGATC
CTTCGCCTCTGTTCTACTTGTTTGTCAATGTTAGCCCAAAAAGACCTCTG
TATCTCGTACTGTGCAATAATCAATCATCTCCTT
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Coding sequence (CDS) from alignment at ACJE01000002.1:1040992..1042125+

>ASPNIDRAFT_211156-T1 ID=ASPNIDRAFT_211156-T1|Name=ASPNIDRAFT_211156-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1782bp|location=Sequence derived from alignment at ACJE01000002.1:1040992..1042125+ (Aspergillus niger ATCC 1015)
ATGTTCCTTCGTTCCGTTACTCGCGCTGCTGCTCGCAGCTCGGCTGTGCC
CACCACGGGCCTGCGCTCCTACCGCACCGTTTCGGGCCCAATGGCTTGCC
TGAACGCTCGTCCTCAGACTGAGAAGAAGTCTATCGCTCCCCAGCAGACC
CGCGCCGCCTCCGAGCATGCCATCTCGAATCCCACACTCGCCGGTATTGA
GAAGCGCTGGGAGGCCATGCCCCCTCAGGAGCAGGCCGAGCTGTGGATGC
AGCTGAGGGACCGCATGAAGGTCGACTGGCACCAGATGACTCTCCAGGAG
AAGAAGGCCGCCTACTGGATCTCCTTCGGACCCCACGGCCCTCGTTCCGT
GCCCCCCAAGGGCGAGAACCTCAAGATCTTCTTCAAGGTCGCCCAGCTCA
CCCTCGTCAGCTTTGGTATTTTCTACGTCATCCACCTGTTCGCCAAGCCC
CAGCCCAAGACCATGACCAAGGAGTGGCAGGAGGCCTCCAATGAGTATGC
TAAGCAAGAGAAGATCAACCCTATCTACGGCATCAGCGCCGAGGGTTACG
AGGGCAAGGGCTTCGTCCAGAGCCCCCCTGCTGAGAAGCAATAGATGTTC
CTTCGTTCCGTTACTCGCGCTGCTGCTCGCAGCTCGGCTGTGCCCACCAC
GGGCCTGCGCTCCTACCGCACCGTTTCGGGCCCAATGGCTTGCCTGAACG
CTCGTCCTCAGACTGAGAAGAAGTCTATCGCTCCCCAGCAGACCCGCGCC
GCCTCCGAGCATGCCATCTCGAATCCCACACTCGCCGGTATTGAGAAGCG
CTGGGAGGCCATGCCCCCTCAGGAGCAGGCCGAGCTGTGGATGCAGCTGA
GGGACCGCATGAAGGTCGACTGGCACCAGATGACTCTCCAGGAGAAGAAG
GCCGCCTACTGGATCTCCTTCGGACCCCACGGCCCTCGTTCCGTGCCCCC
CAAGGGCGAGAACCTCAAGATCTTCTTCAAGGTCGCCCAGCTCACCCTCG
TCAGCTTTGGTATTTTCTACGTCATCCACCTGTTCGCCAAGCCCCAGCCC
AAGACCATGACCAAGGAGTGGCAGGAGGCCTCCAATGAGTATGCTAAGCA
AGAGAAGATCAACCCTATCTACGGCATCAGCGCCGAGGGTTACGAGGGCA
AGGGCTTCGTCCAGAGCCCCCCTGCTGAGAAGCAATAGATGTTCCTTCGT
TCCGTTACTCGCGCTGCTGCTCGCAGCTCGGCTGTGCCCACCACGGGCCT
GCGCTCCTACCGCACCGTTTCGGGCCCAATGGCTTGCCTGAACGCTCGTC
CTCAGACTGAGAAGAAGTCTATCGCTCCCCAGCAGACCCGCGCCGCCTCC
GAGCATGCCATCTCGAATCCCACACTCGCCGGTATTGAGAAGCGCTGGGA
GGCCATGCCCCCTCAGGAGCAGGCCGAGCTGTGGATGCAGCTGAGGGACC
GCATGAAGGTCGACTGGCACCAGATGACTCTCCAGGAGAAGAAGGCCGCC
TACTGGATCTCCTTCGGACCCCACGGCCCTCGTTCCGTGCCCCCCAAGGG
CGAGAACCTCAAGATCTTCTTCAAGGTCGCCCAGCTCACCCTCGTCAGCT
TTGGTATTTTCTACGTCATCCACCTGTTCGCCAAGCCCCAGCCCAAGACC
ATGACCAAGGAGTGGCAGGAGGCCTCCAATGAGTATGCTAAGCAAGAGAA
GATCAACCCTATCTACGGCATCAGCGCCGAGGGTTACGAGGGCAAGGGCT
TCGTCCAGAGCCCCCCTGCTGAGAAGCAATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004129cytochrome-c oxidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
COX5ASPNIDRAFT_211156Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_211156-T1ASPNIDRAFT_211156-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_211156-T1.utr5p1ASPNIDRAFT_211156-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR
ASPNIDRAFT_211156-T1.utr5p2ASPNIDRAFT_211156-T1.utr5p2Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_211156-T1.exon1ASPNIDRAFT_211156-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_211156-T1.exon2ASPNIDRAFT_211156-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_211156-T1.exon3ASPNIDRAFT_211156-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_211156-T1.exon4ASPNIDRAFT_211156-T1.exon4Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_211156-T1.cdsASPNIDRAFT_211156-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_211156-T1.utr3p1ASPNIDRAFT_211156-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036639
DBxrefInterPro:IPR004203
DBxrefPFAM:PF02936
ProductCytochrome c oxidase subunit 5
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000002.1supercontigACJE01000002.1:1040992..1042125 +
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