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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000020.1:831771..832402- Legend: CDSexonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_211979-T1 ID=ASPNIDRAFT_211979-T1|Name=ASPNIDRAFT_211979-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=632bp|location=Sequence derived from alignment at ACJE01000020.1:831771..832402- (Aspergillus niger ATCC 1015)
CATGGCTCCCATCCCGCTCAGCACGGTCGACAGTGTGTATTGATTCTTTC
TAATCCAATGTTATCAGTTACTAACTCTATCTTCTGCCCAGCCGACCTCA
AAGACGTAATCCAACACCTCTTTGAAATCCAATCCGCCGTTCACGGCTAC
CTCGGTCCCGAAACCCAACAAGAGCTCGTTCGCAAAATGTACTCTCCTTC
CTATCCCTGCCATCTTCCTCACCTAAGATTCCACTCTACTAACGGATTAC
GTGTTATGCATTCAGAAAGAACCTCACCCTCGCGCTCTCCACCCTCAGCA
CACACACCTCCGATAATCACCCCGACGCACAATCACAATCACCAGGAAAC
AGCAACGACCCTCCCATCCACAGCATCCAACTCCCCCCCGAGATTATCGA
CTACGTAGATGCAGCAAGGAATCCGGATATCTACACAAGAGAATTCGTGG
AGTTGATCCAGCGCGGGAACCAGGATCTGAGGGGGAAGAAGGAGGCGTTT
GGGAGTTTCCGGGATGTGTTAGCGAGGGAGATGAGGGGAGCGATGCCGGA
GGTTAGGGGGGAGGTGGATAGAGTGGTTGCTTCGTTCGGTGGTGATGGAA
ATGGGAATAATAATGGGGAGGGGAGGGGATGA back to topCoding sequence (CDS) from alignment at ACJE01000020.1:831771..832402- >ASPNIDRAFT_211979-T1 ID=ASPNIDRAFT_211979-T1|Name=ASPNIDRAFT_211979-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1488bp|location=Sequence derived from alignment at ACJE01000020.1:831771..832402- (Aspergillus niger ATCC 1015)
AAAGAACCTCACCCTCGCGCTCTCCACCCTCAGCACACACACCTCCGATA
ATCACCCCGACGCACAATCACAATCACCAGGAAACAGCAACGACCCTCCC
ATCCACAGCATCCAACTCCCCCCCGAGATTATCGACTACGTAGATGCAGC
AAGGAATCCGGATATCTACACAAGAGAATTCGTGGAGTTGATCCAGCGCG
GGAACCAGGATCTGAGGGGGAAGAAGGAGGCGTTTGGGAGTTTCCGGGAT
GTGTTAGCGAGGGAGATGAGGGGAGCGATGCCGGAGGTTAGGGGGGAGGT
GGATAGAGTGGTTGCTTCGTTCGGTGGTGATGGAAATGGGAATAATAATG
GGGAGGGGAGGGGATGACCGACCTCAAAGACGTAATCCAACACCTCTTTG
AAATCCAATCCGCCGTTCACGGCTACCTCGGTCCCGAAACCCAACAAGAG
CTCGTTCGCAAAATCATGGCTCCCATCCCGCTCAGCACGGTCGACAAAAG
AACCTCACCCTCGCGCTCTCCACCCTCAGCACACACACCTCCGATAATCA
CCCCGACGCACAATCACAATCACCAGGAAACAGCAACGACCCTCCCATCC
ACAGCATCCAACTCCCCCCCGAGATTATCGACTACGTAGATGCAGCAAGG
AATCCGGATATCTACACAAGAGAATTCGTGGAGTTGATCCAGCGCGGGAA
CCAGGATCTGAGGGGGAAGAAGGAGGCGTTTGGGAGTTTCCGGGATGTGT
TAGCGAGGGAGATGAGGGGAGCGATGCCGGAGGTTAGGGGGGAGGTGGAT
AGAGTGGTTGCTTCGTTCGGTGGTGATGGAAATGGGAATAATAATGGGGA
GGGGAGGGGATGACCGACCTCAAAGACGTAATCCAACACCTCTTTGAAAT
CCAATCCGCCGTTCACGGCTACCTCGGTCCCGAAACCCAACAAGAGCTCG
TTCGCAAAATCATGGCTCCCATCCCGCTCAGCACGGTCGACAAAAGAACC
TCACCCTCGCGCTCTCCACCCTCAGCACACACACCTCCGATAATCACCCC
GACGCACAATCACAATCACCAGGAAACAGCAACGACCCTCCCATCCACAG
CATCCAACTCCCCCCCGAGATTATCGACTACGTAGATGCAGCAAGGAATC
CGGATATCTACACAAGAGAATTCGTGGAGTTGATCCAGCGCGGGAACCAG
GATCTGAGGGGGAAGAAGGAGGCGTTTGGGAGTTTCCGGGATGTGTTAGC
GAGGGAGATGAGGGGAGCGATGCCGGAGGTTAGGGGGGAGGTGGATAGAG
TGGTTGCTTCGTTCGGTGGTGATGGAAATGGGAATAATAATGGGGAGGGG
AGGGGATGACCGACCTCAAAGACGTAATCCAACACCTCTTTGAAATCCAA
TCCGCCGTTCACGGCTACCTCGGTCCCGAAACCCAACAAGAGCTCGTTCG
CAAAATCATGGCTCCCATCCCGCTCAGCACGGTCGACA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016592 | mediator complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006357 | regulation of transcription by RNA polymerase II |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003712 | transcription coregulator activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264V30 |
| DBxref | InterPro:IPR019145 |
| DBxref | PFAM:PF09748 |
| Product | RNA polymerase II mediator complex subunit |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000020.1 | supercontig | ACJE01000020.1:831771..832402 - |
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