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ASPNIDRAFT_212272-T1, ASPNIDRAFT_212272-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_212272-T1
Unique NameASPNIDRAFT_212272-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000020.1:1541426..1542761-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_212272-T1 ID=ASPNIDRAFT_212272-T1|Name=ASPNIDRAFT_212272-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1336bp|location=Sequence derived from alignment at ACJE01000020.1:1541426..1542761- (Aspergillus niger ATCC 1015)
GATTCTTCTGTCTCAATCACACGGCAGTAGAGAGCTCCTCCTGTCGTCTA
CTCACCATGGCCGCTCCCGAAGCTCATCACCTCTTCCACAACCCAATCGC
CGATCATTCTTTCTCTCCGGATAAGGCGACCCTTGCAGTTGCGCGGGAAA
ACAATGTGGAGCTTTATCAGAAGTCAGGCAACAAGTTCTCGTTGACCGAT
GAACTCAAGGGCCATGAGAAGACGGTGACTGGTGTGGATATCGCTCCTAA
CAGTGGGCGTATCGTTACTTGTTCTCAGGGTAAGTTAACCCCCTCTCCCT
TGTCCTGCAATAGTTCCGTCTAAGTGACCACGGGAACAGACCGCAACGCC
TACGTCTGGGAGCGGACCCCCACGGGTTGGAAGCCAACGCTGGTTCTCCT
TCGGATAAACAGGGCTGCTACATTTGTACGGTGGTCACCATCTGAACAGA
AGTTCGCTGTTGGATCTGGTGCTCGCGTGATCGCGGTGTGCTATTTTGAA
GAGGAGAATGACTGGTGGATCTCGAAGCACTTGAAGAAGCCCATCCGCAG
CACTATTACAACCCTTGCTTGGCATCCAAACTCCGTTCTTCTGGCTGCGG
GGTCGACTGACTCCCATGCCCGGGTGCTTTCTAGCTTCATCAAGGGTGTC
GACACGCGCCCGGAGCCCAGTGCCTGGGGTGAACGGCTGCCTTTCAACAC
AATTTGTGGCGAATTCTTAAATGACTCGGCGGGCTGGATTCAAGGTGTCT
CCTTCTCTCCCAGTGGAGATGCGCTTGCCTTTACTGGCCATGATAGCAGT
GTCACCGTCGTATATCCGAGCGCGCCGGAACAGCCGCCTCGGGCGATGTT
GACCATCGCCACTCGTCTTCTGCCTTTCAACAGTCTGATCTGGAACGGCG
AGAACGAGATCATCGCCGCAGGCCACGTATGTCTTCTAAACAATCAATTT
CAGCAGATGATCCAGTACGACACGTGTCGCTAACAGGAATTAACAGGATT
GCGAACCGTACCGCCTTCGCGGTGACGAGAACGGATGGCAACTTGCTGGG
ACCATTGAGAGCAAGGCAGGGCCGGGTGCTGGAAGCGCTCGCGAGGAGTC
TGCTCTTAACATGTTCCGCCAAATGGATCTTAAGGGACAAACCCAGGCCG
ATACCCAACTTAAGACTACGCATCAGAATACCATCAGCACCGTTAGAGTC
TACGAGGAGGCCGATGGCGTCGTTCGCAAGTTCAGCAGTAAGAGATGCTC
CCCTGCTAAGTTGTCCTGTGGGTTGCGCTAACATCTAGATAATAGCGAGC
GGAGTCGATGGCCGTGTTGTTATCTGGACCATCTAG
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Coding sequence (CDS) from alignment at ACJE01000020.1:1541426..1542761-

>ASPNIDRAFT_212272-T1 ID=ASPNIDRAFT_212272-T1|Name=ASPNIDRAFT_212272-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=4368bp|location=Sequence derived from alignment at ACJE01000020.1:1541426..1542761- (Aspergillus niger ATCC 1015)
CGAGCGGAGTCGATGGCCGTGTTGTTATCTGGACCATCTAGGATTGCGAA
CCGTACCGCCTTCGCGGTGACGAGAACGGATGGCAACTTGCTGGGACCAT
TGAGAGCAAGGCAGGGCCGGGTGCTGGAAGCGCTCGCGAGGAGTCTGCTC
TTAACATGTTCCGCCAAATGGATCTTAAGGGACAAACCCAGGCCGATACC
CAACTTAAGACTACGCATCAGAATACCATCAGCACCGTTAGAGTCTACGA
GGAGGCCGATGGCGTCGTTCGCAAGTTCAGCAACCGCAACGCCTACGTCT
GGGAGCGGACCCCCACGGGTTGGAAGCCAACGCTGGTTCTCCTTCGGATA
AACAGGGCTGCTACATTTGTACGGTGGTCACCATCTGAACAGAAGTTCGC
TGTTGGATCTGGTGCTCGCGTGATCGCGGTGTGCTATTTTGAAGAGGAGA
ATGACTGGTGGATCTCGAAGCACTTGAAGAAGCCCATCCGCAGCACTATT
ACAACCCTTGCTTGGCATCCAAACTCCGTTCTTCTGGCTGCGGGGTCGAC
TGACTCCCATGCCCGGGTGCTTTCTAGCTTCATCAAGGGTGTCGACACGC
GCCCGGAGCCCAGTGCCTGGGGTGAACGGCTGCCTTTCAACACAATTTGT
GGCGAATTCTTAAATGACTCGGCGGGCTGGATTCAAGGTGTCTCCTTCTC
TCCCAGTGGAGATGCGCTTGCCTTTACTGGCCATGATAGCAGTGTCACCG
TCGTATATCCGAGCGCGCCGGAACAGCCGCCTCGGGCGATGTTGACCATC
GCCACTCGTCTTCTGCCTTTCAACAGTCTGATCTGGAACGGCGAGAACGA
GATCATCGCCGCAGGCCACATGGCCGCTCCCGAAGCTCATCACCTCTTCC
ACAACCCAATCGCCGATCATTCTTTCTCTCCGGATAAGGCGACCCTTGCA
GTTGCGCGGGAAAACAATGTGGAGCTTTATCAGAAGTCAGGCAACAAGTT
CTCGTTGACCGATGAACTCAAGGGCCATGAGAAGACGGTGACTGGTGTGG
ATATCGCTCCTAACAGTGGGCGTATCGTTACTTGTTCTCAGGCGAGCGGA
GTCGATGGCCGTGTTGTTATCTGGACCATCTAGGATTGCGAACCGTACCG
CCTTCGCGGTGACGAGAACGGATGGCAACTTGCTGGGACCATTGAGAGCA
AGGCAGGGCCGGGTGCTGGAAGCGCTCGCGAGGAGTCTGCTCTTAACATG
TTCCGCCAAATGGATCTTAAGGGACAAACCCAGGCCGATACCCAACTTAA
GACTACGCATCAGAATACCATCAGCACCGTTAGAGTCTACGAGGAGGCCG
ATGGCGTCGTTCGCAAGTTCAGCAACCGCAACGCCTACGTCTGGGAGCGG
ACCCCCACGGGTTGGAAGCCAACGCTGGTTCTCCTTCGGATAAACAGGGC
TGCTACATTTGTACGGTGGTCACCATCTGAACAGAAGTTCGCTGTTGGAT
CTGGTGCTCGCGTGATCGCGGTGTGCTATTTTGAAGAGGAGAATGACTGG
TGGATCTCGAAGCACTTGAAGAAGCCCATCCGCAGCACTATTACAACCCT
TGCTTGGCATCCAAACTCCGTTCTTCTGGCTGCGGGGTCGACTGACTCCC
ATGCCCGGGTGCTTTCTAGCTTCATCAAGGGTGTCGACACGCGCCCGGAG
CCCAGTGCCTGGGGTGAACGGCTGCCTTTCAACACAATTTGTGGCGAATT
CTTAAATGACTCGGCGGGCTGGATTCAAGGTGTCTCCTTCTCTCCCAGTG
GAGATGCGCTTGCCTTTACTGGCCATGATAGCAGTGTCACCGTCGTATAT
CCGAGCGCGCCGGAACAGCCGCCTCGGGCGATGTTGACCATCGCCACTCG
TCTTCTGCCTTTCAACAGTCTGATCTGGAACGGCGAGAACGAGATCATCG
CCGCAGGCCACATGGCCGCTCCCGAAGCTCATCACCTCTTCCACAACCCA
ATCGCCGATCATTCTTTCTCTCCGGATAAGGCGACCCTTGCAGTTGCGCG
GGAAAACAATGTGGAGCTTTATCAGAAGTCAGGCAACAAGTTCTCGTTGA
CCGATGAACTCAAGGGCCATGAGAAGACGGTGACTGGTGTGGATATCGCT
CCTAACAGTGGGCGTATCGTTACTTGTTCTCAGGCGAGCGGAGTCGATGG
CCGTGTTGTTATCTGGACCATCTAGGATTGCGAACCGTACCGCCTTCGCG
GTGACGAGAACGGATGGCAACTTGCTGGGACCATTGAGAGCAAGGCAGGG
CCGGGTGCTGGAAGCGCTCGCGAGGAGTCTGCTCTTAACATGTTCCGCCA
AATGGATCTTAAGGGACAAACCCAGGCCGATACCCAACTTAAGACTACGC
ATCAGAATACCATCAGCACCGTTAGAGTCTACGAGGAGGCCGATGGCGTC
GTTCGCAAGTTCAGCAACCGCAACGCCTACGTCTGGGAGCGGACCCCCAC
GGGTTGGAAGCCAACGCTGGTTCTCCTTCGGATAAACAGGGCTGCTACAT
TTGTACGGTGGTCACCATCTGAACAGAAGTTCGCTGTTGGATCTGGTGCT
CGCGTGATCGCGGTGTGCTATTTTGAAGAGGAGAATGACTGGTGGATCTC
GAAGCACTTGAAGAAGCCCATCCGCAGCACTATTACAACCCTTGCTTGGC
ATCCAAACTCCGTTCTTCTGGCTGCGGGGTCGACTGACTCCCATGCCCGG
GTGCTTTCTAGCTTCATCAAGGGTGTCGACACGCGCCCGGAGCCCAGTGC
CTGGGGTGAACGGCTGCCTTTCAACACAATTTGTGGCGAATTCTTAAATG
ACTCGGCGGGCTGGATTCAAGGTGTCTCCTTCTCTCCCAGTGGAGATGCG
CTTGCCTTTACTGGCCATGATAGCAGTGTCACCGTCGTATATCCGAGCGC
GCCGGAACAGCCGCCTCGGGCGATGTTGACCATCGCCACTCGTCTTCTGC
CTTTCAACAGTCTGATCTGGAACGGCGAGAACGAGATCATCGCCGCAGGC
CACATGGCCGCTCCCGAAGCTCATCACCTCTTCCACAACCCAATCGCCGA
TCATTCTTTCTCTCCGGATAAGGCGACCCTTGCAGTTGCGCGGGAAAACA
ATGTGGAGCTTTATCAGAAGTCAGGCAACAAGTTCTCGTTGACCGATGAA
CTCAAGGGCCATGAGAAGACGGTGACTGGTGTGGATATCGCTCCTAACAG
TGGGCGTATCGTTACTTGTTCTCAGGCGAGCGGAGTCGATGGCCGTGTTG
TTATCTGGACCATCTAGGATTGCGAACCGTACCGCCTTCGCGGTGACGAG
AACGGATGGCAACTTGCTGGGACCATTGAGAGCAAGGCAGGGCCGGGTGC
TGGAAGCGCTCGCGAGGAGTCTGCTCTTAACATGTTCCGCCAAATGGATC
TTAAGGGACAAACCCAGGCCGATACCCAACTTAAGACTACGCATCAGAAT
ACCATCAGCACCGTTAGAGTCTACGAGGAGGCCGATGGCGTCGTTCGCAA
GTTCAGCAACCGCAACGCCTACGTCTGGGAGCGGACCCCCACGGGTTGGA
AGCCAACGCTGGTTCTCCTTCGGATAAACAGGGCTGCTACATTTGTACGG
TGGTCACCATCTGAACAGAAGTTCGCTGTTGGATCTGGTGCTCGCGTGAT
CGCGGTGTGCTATTTTGAAGAGGAGAATGACTGGTGGATCTCGAAGCACT
TGAAGAAGCCCATCCGCAGCACTATTACAACCCTTGCTTGGCATCCAAAC
TCCGTTCTTCTGGCTGCGGGGTCGACTGACTCCCATGCCCGGGTGCTTTC
TAGCTTCATCAAGGGTGTCGACACGCGCCCGGAGCCCAGTGCCTGGGGTG
AACGGCTGCCTTTCAACACAATTTGTGGCGAATTCTTAAATGACTCGGCG
GGCTGGATTCAAGGTGTCTCCTTCTCTCCCAGTGGAGATGCGCTTGCCTT
TACTGGCCATGATAGCAGTGTCACCGTCGTATATCCGAGCGCGCCGGAAC
AGCCGCCTCGGGCGATGTTGACCATCGCCACTCGTCTTCTGCCTTTCAAC
AGTCTGATCTGGAACGGCGAGAACGAGATCATCGCCGCAGGCCACATGGC
CGCTCCCGAAGCTCATCACCTCTTCCACAACCCAATCGCCGATCATTCTT
TCTCTCCGGATAAGGCGACCCTTGCAGTTGCGCGGGAAAACAATGTGGAG
CTTTATCAGAAGTCAGGCAACAAGTTCTCGTTGACCGATGAACTCAAGGG
CCATGAGAAGACGGTGACTGGTGTGGATATCGCTCCTAACAGTGGGCGTA
TCGTTACTTGTTCTCAGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015629actin cytoskeleton
GO:0005885Arp2/3 protein complex
Vocabulary: Biological Process
TermDefinition
GO:0034314Arp2/3 complex-mediated actin nucleation
GO:0030833regulation of actin filament polymerization
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_212272ASPNIDRAFT_212272Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_212272-T1ASPNIDRAFT_212272-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_212272-T1.cdsASPNIDRAFT_212272-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_212272-T1.exon4ASPNIDRAFT_212272-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_212272-T1.exon3ASPNIDRAFT_212272-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_212272-T1.exon2ASPNIDRAFT_212272-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_212272-T1.exon1ASPNIDRAFT_212272-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_212272-T1.utr5p1ASPNIDRAFT_212272-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09262VPD
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR017383
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefPFAM:PF00400
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000020.1supercontigACJE01000020.1:1541426..1542761 -
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