You are here

Home

ASPNIDRAFT_212729-T1, ASPNIDRAFT_212729-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_212729-T1
Unique NameASPNIDRAFT_212729-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000001.1:172809..173768+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_212729-T1 ID=ASPNIDRAFT_212729-T1|Name=ASPNIDRAFT_212729-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=960bp|location=Sequence derived from alignment at ACJE01000001.1:172809..173768+ (Aspergillus niger ATCC 1015)
ATGGCGCCCCTCCAGACTGTCTTGATCACCGGCTGCTCCGCCAACGGCAT
CGGATCGGCCCTGGCCGTCGCGCTCGCCAATCAAGGCCACCACGTCTTCG
CCACTGCGCGCTCACCATCCAAGATTCCGTCGTCTCTCACCACTTTGTCC
AATGTCACCCCTCTCCAGCTCGACGTCACGTCATCAGAGTCTGTGGCTGC
TGCCGTTCAGGCAGTCGAGCAGCATGGAACAGGCCTAGATATTCTCATCA
ACAATGCGGGCTCCGGTTACACCATGCCGCTGCTGGACGTCGACCTCACC
CAAGCCCAGCAGGTCTACGAGACCAACATCTGGGGTCCGCTGCGTCTCGT
TCAAGCACTAGCACCATTGCTAATATCCCGTGGTGGACGCGTCGTCAACA
TAAGCAGCGTCGGCGCGGTAGTCCCCACACCATGGATCGGTACATCAGTC
CTCTCCCTCTCGGTCGGCATGCAGTGTCACATTAACAACGTGATACAGGA
ATCTACTCATCATCAAAATCCGCCTTGAGCAATCTCTCTGAGACCCTCCG
TCTCGAAGTAGCACCACTAGGTGTATCCGTGGCCACGCTCATGATCGGCA
CCGTCACGACGCCGTTTCATGCAAACGAGCCCCGATTCACCCTCCCACCA
AACTCTCGATATGCAGCTATCGCGGAGACCATCTCCCGCTGGGCGTCAGG
TGAGGCAAGTCCCAAGGGATGCTCAGCCCAAGAGCTGGCGGATTTGATCC
TGCCTGATGTACTTGGTACGACGGGACATGGCATGTTCTGGCGCGGGCCG
AATAGTGGTGCGGTGAAATTTGTTGCTCAATGGGTGCCTGGGTGGTTAGC
TGTGAGTTTGTCCTCTCCTACCGAGGGTATTATTGCTAATGTTGGAATAG
GATCGCATGATGAGCACTGGTCAGGGATTGGATGAGCTCGCGGCGAGTCA
GTCAAAGTGA
back to top

Coding sequence (CDS) from alignment at ACJE01000001.1:172809..173768+

>ASPNIDRAFT_212729-T1 ID=ASPNIDRAFT_212729-T1|Name=ASPNIDRAFT_212729-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2556bp|location=Sequence derived from alignment at ACJE01000001.1:172809..173768+ (Aspergillus niger ATCC 1015)
ATGGCGCCCCTCCAGACTGTCTTGATCACCGGCTGCTCCGCCAACGGCAT
CGGATCGGCCCTGGCCGTCGCGCTCGCCAATCAAGGCCACCACGTCTTCG
CCACTGCGCGCTCACCATCCAAGATTCCGTCGTCTCTCACCACTTTGTCC
AATGTCACCCCTCTCCAGCTCGACGTCACGTCATCAGAGTCTGTGGCTGC
TGCCGTTCAGGCAGTCGAGCAGCATGGAACAGGCCTAGATATTCTCATCA
ACAATGCGGGCTCCGGTTACACCATGCCGCTGCTGGACGTCGACCTCACC
CAAGCCCAGCAGGTCTACGAGACCAACATCTGGGGTCCGCTGCGTCTCGT
TCAAGCACTAGCACCATTGCTAATATCCCGTGGTGGACGCGTCGTCAACA
TAAGCAGCGTCGGCGCGGTAGTCCCCACACCATGGATCGGAATCTACTCA
TCATCAAAATCCGCCTTGAGCAATCTCTCTGAGACCCTCCGTCTCGAAGT
AGCACCACTAGGTGTATCCGTGGCCACGCTCATGATCGGCACCGTCACGA
CGCCGTTTCATGCAAACGAGCCCCGATTCACCCTCCCACCAAACTCTCGA
TATGCAGCTATCGCGGAGACCATCTCCCGCTGGGCGTCAGGTGAGGCAAG
TCCCAAGGGATGCTCAGCCCAAGAGCTGGCGGATTTGATCCTGCCTGATG
TACTTGGTACGACGGGACATGGCATGTTCTGGCGCGGGCCGAATAGTGGT
GCGGTGAAATTTGTTGCTCAATGGGTGCCTGGGTGGTTAGCTGATCGCAT
GATGAGCACTGGTCAGGGATTGGATGAGCTCGCGGCGAGTCAGTCAAAGT
GAATGGCGCCCCTCCAGACTGTCTTGATCACCGGCTGCTCCGCCAACGGC
ATCGGATCGGCCCTGGCCGTCGCGCTCGCCAATCAAGGCCACCACGTCTT
CGCCACTGCGCGCTCACCATCCAAGATTCCGTCGTCTCTCACCACTTTGT
CCAATGTCACCCCTCTCCAGCTCGACGTCACGTCATCAGAGTCTGTGGCT
GCTGCCGTTCAGGCAGTCGAGCAGCATGGAACAGGCCTAGATATTCTCAT
CAACAATGCGGGCTCCGGTTACACCATGCCGCTGCTGGACGTCGACCTCA
CCCAAGCCCAGCAGGTCTACGAGACCAACATCTGGGGTCCGCTGCGTCTC
GTTCAAGCACTAGCACCATTGCTAATATCCCGTGGTGGACGCGTCGTCAA
CATAAGCAGCGTCGGCGCGGTAGTCCCCACACCATGGATCGGAATCTACT
CATCATCAAAATCCGCCTTGAGCAATCTCTCTGAGACCCTCCGTCTCGAA
GTAGCACCACTAGGTGTATCCGTGGCCACGCTCATGATCGGCACCGTCAC
GACGCCGTTTCATGCAAACGAGCCCCGATTCACCCTCCCACCAAACTCTC
GATATGCAGCTATCGCGGAGACCATCTCCCGCTGGGCGTCAGGTGAGGCA
AGTCCCAAGGGATGCTCAGCCCAAGAGCTGGCGGATTTGATCCTGCCTGA
TGTACTTGGTACGACGGGACATGGCATGTTCTGGCGCGGGCCGAATAGTG
GTGCGGTGAAATTTGTTGCTCAATGGGTGCCTGGGTGGTTAGCTGATCGC
ATGATGAGCACTGGTCAGGGATTGGATGAGCTCGCGGCGAGTCAGTCAAA
GTGAATGGCGCCCCTCCAGACTGTCTTGATCACCGGCTGCTCCGCCAACG
GCATCGGATCGGCCCTGGCCGTCGCGCTCGCCAATCAAGGCCACCACGTC
TTCGCCACTGCGCGCTCACCATCCAAGATTCCGTCGTCTCTCACCACTTT
GTCCAATGTCACCCCTCTCCAGCTCGACGTCACGTCATCAGAGTCTGTGG
CTGCTGCCGTTCAGGCAGTCGAGCAGCATGGAACAGGCCTAGATATTCTC
ATCAACAATGCGGGCTCCGGTTACACCATGCCGCTGCTGGACGTCGACCT
CACCCAAGCCCAGCAGGTCTACGAGACCAACATCTGGGGTCCGCTGCGTC
TCGTTCAAGCACTAGCACCATTGCTAATATCCCGTGGTGGACGCGTCGTC
AACATAAGCAGCGTCGGCGCGGTAGTCCCCACACCATGGATCGGAATCTA
CTCATCATCAAAATCCGCCTTGAGCAATCTCTCTGAGACCCTCCGTCTCG
AAGTAGCACCACTAGGTGTATCCGTGGCCACGCTCATGATCGGCACCGTC
ACGACGCCGTTTCATGCAAACGAGCCCCGATTCACCCTCCCACCAAACTC
TCGATATGCAGCTATCGCGGAGACCATCTCCCGCTGGGCGTCAGGTGAGG
CAAGTCCCAAGGGATGCTCAGCCCAAGAGCTGGCGGATTTGATCCTGCCT
GATGTACTTGGTACGACGGGACATGGCATGTTCTGGCGCGGGCCGAATAG
TGGTGCGGTGAAATTTGTTGCTCAATGGGTGCCTGGGTGGTTAGCTGATC
GCATGATGAGCACTGGTCAGGGATTGGATGAGCTCGCGGCGAGTCAGTCA
AAGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_212729ASPNIDRAFT_212729Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_212729-T1.exon1ASPNIDRAFT_212729-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_212729-T1.exon2ASPNIDRAFT_212729-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_212729-T1.exon3ASPNIDRAFT_212729-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_212729-T1.cdsASPNIDRAFT_212729-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_212729-T1ASPNIDRAFT_212729-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR020904
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF01370
DBxrefPFAM:PF08643
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000001.1supercontigACJE01000001.1:172809..173768 +
Powered by Drupal