You are here

Home

ASPNIDRAFT_213502-T1, ASPNIDRAFT_213502-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_213502-T1
Unique NameASPNIDRAFT_213502-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000015.1:982667..984292-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_213502-T1 ID=ASPNIDRAFT_213502-T1|Name=ASPNIDRAFT_213502-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1626bp|location=Sequence derived from alignment at ACJE01000015.1:982667..984292- (Aspergillus niger ATCC 1015)
ATGCTTTACGCGACCGGCTTGACGGAGAAAGACATGTCCAAGGCACAGGT
TGGTATTTCATCAGTGTGGTTCGAAGGGAATCCTTGTAACATGCACTTGA
TGGATTTGTCGTCGCTGGTTCGCGAGTCGGTAGCCAAAGCTGGCCTGGTT
CCCATGCGCTTCAACTCCATCGGCGCCTCTGATGGCATTAGTATGGGCAC
ATCTGGCATGCGATTCAGTTTACAGAGCCGAGAGATCATTGCTGATGGAA
TTGAAACGGTCATGAATGCCCAGTGGTATGATGCTAATATCTCGTTGCCT
GGCTGTGATAAGAACATGCCAGGTGTGCTGATGGCTATGGGTCGGGTCAA
CCGTCCGAGTATCATGGTGTATGGTGGTAGTATCAAGCCCGGCTGCAGTG
CGGGGGGTAAGCCACTTGACTTGGTCAGCGCCTTTCAATCGTATGGCCAA
TATCTCACTGGTGAGATCGACGAGAAGGAACGATTTGATATTATCCGACA
CGCTTGCCCAGGTGCTGGTGCCTGTGGGGGTATGTATACGGCTAATACAC
TGGCAACGGCCATCGAGACCCTCGGAATGACGGTCCCTGGAAGCAGCAGT
ACACCGGCAGAGGATCCGAGGAAGCTGGCAGAGTGTGAGGACATCGGTCA
GACGGTGAAGAATCTGCTGAAGGAGGACATCCGTCCCAAGGATATCATGA
CACGGCAGGCATTTGAAAATGCTATGATTGTTGTGAATATCCTTGGAGGC
AGCACCAATGCAGTACTGCACTTGATTGCTATCGCTGATTCCGTTGGGAT
CAAATTGACTATCGATGACTTCCAGGCTGTGTCAGACAAGACACCTTTCT
TAGCTGATCTAAAGCCTTCCGGCAAGTATGTCATGCATGACCTGCACAAA
GTCGGGGGCACGCCTGCCCTGCTGAAGTTCCTGCTCAGGGAAGGCCTTAT
TGACGGCTCCGGCGTCACTGTCACTGGCAAAACCATGAAAGAGAATGTAG
CCTCATGGCCCGAATTTTCACCTGAGCAGCCCATCATCCGCCCTCTAAGC
AATCCCATCAAGCCAACCGGCCACTTGCAGATCCTTCGTGGGTCATTGGC
CCCTGGCGGTTCGGTTGGAAAAATCACCGGCAAAGAAGGTTTACGGTTCG
AAGGTCTTGCTAAATGTTACGACTTTGAGGACGCTTTCATCGAGGCTCTC
GAACGAGGCGAGATCAAGAAGGGCGAGAAAACGGTCGTTATTATTCGATA
TGAAGGGCCCAAAGGCGGCCCCGGGATGCCTGAGATGCTCAAGCCCAGCT
CAGCTATCATGGGCGCCGGATTGGGTCAGGATGTTGCGCTACTCACTGAT
GGAAGATTCTCTGGAGGTAGTCATGGCTTTTTAATTGGGCATGTTGTGCC
TGAGGCTATGGAGGGCGGGCCCATTGCCCTGGTGAAGGATGGCGATCGAA
TCGTAATTGATGCGGAGCAAAGAGTGGTCGACCTGCTGATCACCCCAGAA
GAAATGGCAAAGAGAAGAGTGTCTTGGACAGCACCGGCACCTCGGGCGAA
GAAGGGGACATTAAGCAAGTATGCGAAGCTGGTGAGCGATGCGAGCCATG
GGTGCGTGACGGATGGTCCAATATAG
back to top

Coding sequence (CDS) from alignment at ACJE01000015.1:982667..984292-

>ASPNIDRAFT_213502-T1 ID=ASPNIDRAFT_213502-T1|Name=ASPNIDRAFT_213502-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1626bp|location=Sequence derived from alignment at ACJE01000015.1:982667..984292- (Aspergillus niger ATCC 1015)
ATGCTTTACGCGACCGGCTTGACGGAGAAAGACATGTCCAAGGCACAGGT
TGGTATTTCATCAGTGTGGTTCGAAGGGAATCCTTGTAACATGCACTTGA
TGGATTTGTCGTCGCTGGTTCGCGAGTCGGTAGCCAAAGCTGGCCTGGTT
CCCATGCGCTTCAACTCCATCGGCGCCTCTGATGGCATTAGTATGGGCAC
ATCTGGCATGCGATTCAGTTTACAGAGCCGAGAGATCATTGCTGATGGAA
TTGAAACGGTCATGAATGCCCAGTGGTATGATGCTAATATCTCGTTGCCT
GGCTGTGATAAGAACATGCCAGGTGTGCTGATGGCTATGGGTCGGGTCAA
CCGTCCGAGTATCATGGTGTATGGTGGTAGTATCAAGCCCGGCTGCAGTG
CGGGGGGTAAGCCACTTGACTTGGTCAGCGCCTTTCAATCGTATGGCCAA
TATCTCACTGGTGAGATCGACGAGAAGGAACGATTTGATATTATCCGACA
CGCTTGCCCAGGTGCTGGTGCCTGTGGGGGTATGTATACGGCTAATACAC
TGGCAACGGCCATCGAGACCCTCGGAATGACGGTCCCTGGAAGCAGCAGT
ACACCGGCAGAGGATCCGAGGAAGCTGGCAGAGTGTGAGGACATCGGTCA
GACGGTGAAGAATCTGCTGAAGGAGGACATCCGTCCCAAGGATATCATGA
CACGGCAGGCATTTGAAAATGCTATGATTGTTGTGAATATCCTTGGAGGC
AGCACCAATGCAGTACTGCACTTGATTGCTATCGCTGATTCCGTTGGGAT
CAAATTGACTATCGATGACTTCCAGGCTGTGTCAGACAAGACACCTTTCT
TAGCTGATCTAAAGCCTTCCGGCAAGTATGTCATGCATGACCTGCACAAA
GTCGGGGGCACGCCTGCCCTGCTGAAGTTCCTGCTCAGGGAAGGCCTTAT
TGACGGCTCCGGCGTCACTGTCACTGGCAAAACCATGAAAGAGAATGTAG
CCTCATGGCCCGAATTTTCACCTGAGCAGCCCATCATCCGCCCTCTAAGC
AATCCCATCAAGCCAACCGGCCACTTGCAGATCCTTCGTGGGTCATTGGC
CCCTGGCGGTTCGGTTGGAAAAATCACCGGCAAAGAAGGTTTACGGTTCG
AAGGTCTTGCTAAATGTTACGACTTTGAGGACGCTTTCATCGAGGCTCTC
GAACGAGGCGAGATCAAGAAGGGCGAGAAAACGGTCGTTATTATTCGATA
TGAAGGGCCCAAAGGCGGCCCCGGGATGCCTGAGATGCTCAAGCCCAGCT
CAGCTATCATGGGCGCCGGATTGGGTCAGGATGTTGCGCTACTCACTGAT
GGAAGATTCTCTGGAGGTAGTCATGGCTTTTTAATTGGGCATGTTGTGCC
TGAGGCTATGGAGGGCGGGCCCATTGCCCTGGTGAAGGATGGCGATCGAA
TCGTAATTGATGCGGAGCAAAGAGTGGTCGACCTGCTGATCACCCCAGAA
GAAATGGCAAAGAGAAGAGTGTCTTGGACAGCACCGGCACCTCGGGCGAA
GAAGGGGACATTAAGCAAGTATGCGAAGCTGGTGAGCGATGCGAGCCATG
GGTGCGTGACGGATGGTCCAATATAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0009082branched-chain amino acid biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0004160dihydroxy-acid dehydratase activity
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_213502ASPNIDRAFT_213502Aspergillus niger ATCC 1015gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_213502-T1.cdsASPNIDRAFT_213502-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_213502-T1.exon1ASPNIDRAFT_213502-T1.exon1Aspergillus niger ATCC 1015exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_213502-T1ASPNIDRAFT_213502-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR037237
DBxrefInterPro:IPR020558
DBxrefInterPro:IPR004404
DBxrefInterPro:IPR000581
DBxrefInterPro:IPR042096
DBxrefPFAM:PF00920
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000015.1supercontigACJE01000015.1:982667..984292 -
Powered by Drupal