You are here

Home

ASPNIDRAFT_213947-T1, ASPNIDRAFT_213947-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_213947-T1
Unique NameASPNIDRAFT_213947-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000012.1:396583..398202+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_213947-T1 ID=ASPNIDRAFT_213947-T1|Name=ASPNIDRAFT_213947-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1620bp|location=Sequence derived from alignment at ACJE01000012.1:396583..398202+ (Aspergillus niger ATCC 1015)
CTTAACCGCACACACAAACCCGGTCAAGACTTCCCCACGCGCAACTTTAC
CACCGTTCAATTCTCTCCACGCTCAACTCCGTTGCGTCCTCAGCCATCAA
GATGTCTACTGCCGTCGAGAACACTACCGACAACGTCGCCTCTGCTCCCG
CCACTACCGCCCCCGAGGCTACTACCAACGGCACTGCTCCCGCCCCTGCG
CAGTCCACGGACGCTGCCGCTGCCAGTGCCGATGAAGGACGTCGGTTGTA
CATTGGGAACCTCGCTTATGCGACCACTGAGGGGGAGCTGAAGGAGTTTT
TCAAGAACTACAAGATGTAAGTTGCTTGACCTTGCTTTGCTTTGTTGTTG
TTCCACCTGGCCTTTCACCTCTCGGTTGGTCTAAGCTCCGTTGGGCTGGT
CCTAGCGGTTCGGGGGCCGGCGAGAGCCACGTTTCCTACACCCCCTTGCT
GCCATCGGAGGTAGTACCGCGCAGCGGTGGTATGTGGCCACCACTGCAGG
GACGCCAATTGTTCAGAGCTCCATTTCTGAACCCCTTCTTTGTCAAACAT
TCTTATGCGGGAAGTTACACCGATCTAACAATGGCTCTTTCACAGTGAGA
GCGTCTCCATCCCCGTGAACCCTCGCACCAACCGTCCCGTTGGCTACGCC
TTCGTGGACCTCGCCACTGCTCAGGAGGCCACCGCTGCTATTGAGGAGCT
GTCTGGAAAGGAGATCCTCCAGCGTAAGGTCTCTGTGCAGCTTGCCCGCA
AGCCCGAGCCTGCTGAGGCCAAGGCCGAGGGTGCTACAAGTGGCGGTGAG
GGTGCCAGCGGTAACGAGGGCCGCAAGAGGGCTGGTGGCCGTGGCCGTGG
CCGCGGCCGCGGTCGTGGTCGTGGAGGCCGTCTGCCCCGTGCTGGTCGCT
CTGTAAGTGGCTCGTCATTCATGCTCCATCCAATCGGATACTAATCTACC
ATGTAGCAGGCCCCAGTTCAGAACGGTCAGGAGGCTGCTGAGCCCACCAA
CGTTCCCGCTCAGGCTGCTCCCCTGACTGAGGTCACCAACCAGAACGAGA
CGGCTGCTGCCACCGAGTCCAAGCAGGCTGGCAAGCCCCGTGCTCCTCGT
CCCCAGAAGCAGCGCGGTCCTCCCGAGGATGGCATTCCTTCCAAGACCAA
GGTCATGGTCGCTAACCTTCCTTATGACCTGACCGAAGACAAGGTACGGA
TGATGATTTCAGAATTTAGAGTAACATACTAATCCCCTCTCAGCTCAAGG
AGATCTTTGCCGACTACCAGCCCGTCTCCGCCAAGATTGCTCTCCGCCCC
ATTCCCCGTTTCATGATCAAGAAGCTCCAGGCTCGCAACGAGCGCCGCAA
GGGCCGTGGTTTCGGTTTCGTCACCCTTGGATCCGAGGAGCTCCAGAACA
AGGCTGTTGTGGAGATGAACGGCAAGGAGATCGAGGGCCGTGAAATCGCC
GTCAAGGTCGCCATCGACAGCCCCGGCAAGGAGGACGACGCCATCGCCCC
TGCTGAGACTGAGACCACCGAGCAGGCGACTGAGGCTCCGGCACAGGAGA
ACGCTGCTCCCGCCGCTGCTTAAATGACAATCTCGTTCCCCACCTGAACG
AACACACCTCCGTGGAAACT
back to top

Coding sequence (CDS) from alignment at ACJE01000012.1:396583..398202+

>ASPNIDRAFT_213947-T1 ID=ASPNIDRAFT_213947-T1|Name=ASPNIDRAFT_213947-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=4356bp|location=Sequence derived from alignment at ACJE01000012.1:396583..398202+ (Aspergillus niger ATCC 1015)
ATGTCTACTGCCGTCGAGAACACTACCGACAACGTCGCCTCTGCTCCCGC
CACTACCGCCCCCGAGGCTACTACCAACGGCACTGCTCCCGCCCCTGCGC
AGTCCACGGACGCTGCCGCTGCCAGTGCCGATGAAGGACGTCGGTTGTAC
ATTGGGAACCTCGCTTATGCGACCACTGAGGGGGAGCTGAAGGAGTTTTT
CAAGAACTACAAGATTGAGAGCGTCTCCATCCCCGTGAACCCTCGCACCA
ACCGTCCCGTTGGCTACGCCTTCGTGGACCTCGCCACTGCTCAGGAGGCC
ACCGCTGCTATTGAGGAGCTGTCTGGAAAGGAGATCCTCCAGCGTAAGGT
CTCTGTGCAGCTTGCCCGCAAGCCCGAGCCTGCTGAGGCCAAGGCCGAGG
GTGCTACAAGTGGCGGTGAGGGTGCCAGCGGTAACGAGGGCCGCAAGAGG
GCTGGTGGCCGTGGCCGTGGCCGCGGCCGCGGTCGTGGTCGTGGAGGCCG
TCTGCCCCGTGCTGGTCGCTCTCAGGCCCCAGTTCAGAACGGTCAGGAGG
CTGCTGAGCCCACCAACGTTCCCGCTCAGGCTGCTCCCCTGACTGAGGTC
ACCAACCAGAACGAGACGGCTGCTGCCACCGAGTCCAAGCAGGCTGGCAA
GCCCCGTGCTCCTCGTCCCCAGAAGCAGCGCGGTCCTCCCGAGGATGGCA
TTCCTTCCAAGACCAAGGTCATGGTCGCTAACCTTCCTTATGACCTGACC
GAAGACAAGCTCAAGGAGATCTTTGCCGACTACCAGCCCGTCTCCGCCAA
GATTGCTCTCCGCCCCATTCCCCGTTTCATGATCAAGAAGCTCCAGGCTC
GCAACGAGCGCCGCAAGGGCCGTGGTTTCGGTTTCGTCACCCTTGGATCC
GAGGAGCTCCAGAACAAGGCTGTTGTGGAGATGAACGGCAAGGAGATCGA
GGGCCGTGAAATCGCCGTCAAGGTCGCCATCGACAGCCCCGGCAAGGAGG
ACGACGCCATCGCCCCTGCTGAGACTGAGACCACCGAGCAGGCGACTGAG
GCTCCGGCACAGGAGAACGCTGCTCCCGCCGCTGCTTAAATGTCTACTGC
CGTCGAGAACACTACCGACAACGTCGCCTCTGCTCCCGCCACTACCGCCC
CCGAGGCTACTACCAACGGCACTGCTCCCGCCCCTGCGCAGTCCACGGAC
GCTGCCGCTGCCAGTGCCGATGAAGGACGTCGGTTGTACATTGGGAACCT
CGCTTATGCGACCACTGAGGGGGAGCTGAAGGAGTTTTTCAAGAACTACA
AGATTGAGAGCGTCTCCATCCCCGTGAACCCTCGCACCAACCGTCCCGTT
GGCTACGCCTTCGTGGACCTCGCCACTGCTCAGGAGGCCACCGCTGCTAT
TGAGGAGCTGTCTGGAAAGGAGATCCTCCAGCGTAAGGTCTCTGTGCAGC
TTGCCCGCAAGCCCGAGCCTGCTGAGGCCAAGGCCGAGGGTGCTACAAGT
GGCGGTGAGGGTGCCAGCGGTAACGAGGGCCGCAAGAGGGCTGGTGGCCG
TGGCCGTGGCCGCGGCCGCGGTCGTGGTCGTGGAGGCCGTCTGCCCCGTG
CTGGTCGCTCTCAGGCCCCAGTTCAGAACGGTCAGGAGGCTGCTGAGCCC
ACCAACGTTCCCGCTCAGGCTGCTCCCCTGACTGAGGTCACCAACCAGAA
CGAGACGGCTGCTGCCACCGAGTCCAAGCAGGCTGGCAAGCCCCGTGCTC
CTCGTCCCCAGAAGCAGCGCGGTCCTCCCGAGGATGGCATTCCTTCCAAG
ACCAAGGTCATGGTCGCTAACCTTCCTTATGACCTGACCGAAGACAAGCT
CAAGGAGATCTTTGCCGACTACCAGCCCGTCTCCGCCAAGATTGCTCTCC
GCCCCATTCCCCGTTTCATGATCAAGAAGCTCCAGGCTCGCAACGAGCGC
CGCAAGGGCCGTGGTTTCGGTTTCGTCACCCTTGGATCCGAGGAGCTCCA
GAACAAGGCTGTTGTGGAGATGAACGGCAAGGAGATCGAGGGCCGTGAAA
TCGCCGTCAAGGTCGCCATCGACAGCCCCGGCAAGGAGGACGACGCCATC
GCCCCTGCTGAGACTGAGACCACCGAGCAGGCGACTGAGGCTCCGGCACA
GGAGAACGCTGCTCCCGCCGCTGCTTAAATGTCTACTGCCGTCGAGAACA
CTACCGACAACGTCGCCTCTGCTCCCGCCACTACCGCCCCCGAGGCTACT
ACCAACGGCACTGCTCCCGCCCCTGCGCAGTCCACGGACGCTGCCGCTGC
CAGTGCCGATGAAGGACGTCGGTTGTACATTGGGAACCTCGCTTATGCGA
CCACTGAGGGGGAGCTGAAGGAGTTTTTCAAGAACTACAAGATTGAGAGC
GTCTCCATCCCCGTGAACCCTCGCACCAACCGTCCCGTTGGCTACGCCTT
CGTGGACCTCGCCACTGCTCAGGAGGCCACCGCTGCTATTGAGGAGCTGT
CTGGAAAGGAGATCCTCCAGCGTAAGGTCTCTGTGCAGCTTGCCCGCAAG
CCCGAGCCTGCTGAGGCCAAGGCCGAGGGTGCTACAAGTGGCGGTGAGGG
TGCCAGCGGTAACGAGGGCCGCAAGAGGGCTGGTGGCCGTGGCCGTGGCC
GCGGCCGCGGTCGTGGTCGTGGAGGCCGTCTGCCCCGTGCTGGTCGCTCT
CAGGCCCCAGTTCAGAACGGTCAGGAGGCTGCTGAGCCCACCAACGTTCC
CGCTCAGGCTGCTCCCCTGACTGAGGTCACCAACCAGAACGAGACGGCTG
CTGCCACCGAGTCCAAGCAGGCTGGCAAGCCCCGTGCTCCTCGTCCCCAG
AAGCAGCGCGGTCCTCCCGAGGATGGCATTCCTTCCAAGACCAAGGTCAT
GGTCGCTAACCTTCCTTATGACCTGACCGAAGACAAGCTCAAGGAGATCT
TTGCCGACTACCAGCCCGTCTCCGCCAAGATTGCTCTCCGCCCCATTCCC
CGTTTCATGATCAAGAAGCTCCAGGCTCGCAACGAGCGCCGCAAGGGCCG
TGGTTTCGGTTTCGTCACCCTTGGATCCGAGGAGCTCCAGAACAAGGCTG
TTGTGGAGATGAACGGCAAGGAGATCGAGGGCCGTGAAATCGCCGTCAAG
GTCGCCATCGACAGCCCCGGCAAGGAGGACGACGCCATCGCCCCTGCTGA
GACTGAGACCACCGAGCAGGCGACTGAGGCTCCGGCACAGGAGAACGCTG
CTCCCGCCGCTGCTTAAATGTCTACTGCCGTCGAGAACACTACCGACAAC
GTCGCCTCTGCTCCCGCCACTACCGCCCCCGAGGCTACTACCAACGGCAC
TGCTCCCGCCCCTGCGCAGTCCACGGACGCTGCCGCTGCCAGTGCCGATG
AAGGACGTCGGTTGTACATTGGGAACCTCGCTTATGCGACCACTGAGGGG
GAGCTGAAGGAGTTTTTCAAGAACTACAAGATTGAGAGCGTCTCCATCCC
CGTGAACCCTCGCACCAACCGTCCCGTTGGCTACGCCTTCGTGGACCTCG
CCACTGCTCAGGAGGCCACCGCTGCTATTGAGGAGCTGTCTGGAAAGGAG
ATCCTCCAGCGTAAGGTCTCTGTGCAGCTTGCCCGCAAGCCCGAGCCTGC
TGAGGCCAAGGCCGAGGGTGCTACAAGTGGCGGTGAGGGTGCCAGCGGTA
ACGAGGGCCGCAAGAGGGCTGGTGGCCGTGGCCGTGGCCGCGGCCGCGGT
CGTGGTCGTGGAGGCCGTCTGCCCCGTGCTGGTCGCTCTCAGGCCCCAGT
TCAGAACGGTCAGGAGGCTGCTGAGCCCACCAACGTTCCCGCTCAGGCTG
CTCCCCTGACTGAGGTCACCAACCAGAACGAGACGGCTGCTGCCACCGAG
TCCAAGCAGGCTGGCAAGCCCCGTGCTCCTCGTCCCCAGAAGCAGCGCGG
TCCTCCCGAGGATGGCATTCCTTCCAAGACCAAGGTCATGGTCGCTAACC
TTCCTTATGACCTGACCGAAGACAAGCTCAAGGAGATCTTTGCCGACTAC
CAGCCCGTCTCCGCCAAGATTGCTCTCCGCCCCATTCCCCGTTTCATGAT
CAAGAAGCTCCAGGCTCGCAACGAGCGCCGCAAGGGCCGTGGTTTCGGTT
TCGTCACCCTTGGATCCGAGGAGCTCCAGAACAAGGCTGTTGTGGAGATG
AACGGCAAGGAGATCGAGGGCCGTGAAATCGCCGTCAAGGTCGCCATCGA
CAGCCCCGGCAAGGAGGACGACGCCATCGCCCCTGCTGAGACTGAGACCA
CCGAGCAGGCGACTGAGGCTCCGGCACAGGAGAACGCTGCTCCCGCCGCT
GCTTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_213947ASPNIDRAFT_213947Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_213947-T1ASPNIDRAFT_213947-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_213947-T1.utr5p1ASPNIDRAFT_213947-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_213947-T1.exon1ASPNIDRAFT_213947-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_213947-T1.exon2ASPNIDRAFT_213947-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_213947-T1.exon3ASPNIDRAFT_213947-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_213947-T1.exon4ASPNIDRAFT_213947-T1.exon4Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_213947-T1.cdsASPNIDRAFT_213947-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_213947-T1.utr3p1ASPNIDRAFT_213947-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00076
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000012.1supercontigACJE01000012.1:396583..398202 +
Powered by Drupal