|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000010.1:1610407..1611684+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_225596-T1 ID=ASPNIDRAFT_225596-T1|Name=ASPNIDRAFT_225596-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1278bp|location=Sequence derived from alignment at ACJE01000010.1:1610407..1611684+ (Aspergillus niger ATCC 1015)
TCATGAGCATATATCTATGTCCAACAGCAAATAGCTCAACCCCTCTTTAA
GCTCGATTAGCGCTCAGCCTGCCTCTTCGGTGTCATTCGTTCTCTAATTC
CTAATCGTACATTATATCTGCAGCGTGCTTCTCTGCCTCAAAATCGCCTT
CTCTCCTTACTCTATCCACAGACGCACTTGACCTCCTCATATATTCCTCG
ACATACTGGGTCTCGACCACCCCGGCCTTCCATTTGCGCCAATATGTCGG
GCCTTAATACTACTGCAGAATATGAATTCAAGAAACAATTGACCTATGGC
TGCCATGCAAAGATCGATGGCTACGGCACCTCATATGGCTACGTCCCCTC
GCTGGCTGCGGGCATTGTATTTTGTGTCCTCTTCGGTCTGTCGATGTTGC
TCCATACATTGCAGCTGGTGTGGAAGAGGACCTGGTGGTGCTCTGTCTTC
GTTCTTGGATGTATCAGTATGTGAACCCCTCCTGCAAGAGTCCTTTCCAA
CCATACGCTAACACAACCATTACAGCGGAGGTCCTGGGCTGGGCAGCACG
TACCTGGTCTGCTGAATGTCCATACAATGGAACCGCCTTTCTCATGCAAA
TCTCTACCTTGATCATCGGTACGCGAGCAGGACCACGCATATCAAATTCA
TGAAACAGATACTAATTTTCTCTCTTTAGCCCCCACTTTCTTTACCGCCG
GGATCTACGTGCTCCTGGGCCGTTTCATCCACCTGTTGGGGCCCGAGACC
TCAATTTTGAGTCCGAAACTCTATCTCTGGATTTTCGTCACCTGCGATAT
CATCTCATTGGTTGTCCAGGCTGTGGGTGGTGGCATGGCGTCGATGGAAG
TCAACAAGGTCAACGGCGATACTGCTCCAGGCACGCACACCATGGTCGCC
GGTATCGTGTTCCAGCTGGCGTCTATCACGGTCTTTGTTTTCCTCGCCGC
TGATTTCGTCCGTCGCACTCTCCGTATGCGGATCTTGCAAACCATGACCG
GCACGATCATCCCTCTTCTCGGTGCGATGATCTTCTCTGTCCTCTGCATC
TACATCCGGAGTATCTATCGAACCATTGAGCTGTCGCAGGGGTGGTCTGG
CTACTTGATCACGCACGAACGGTACTTCATTGTCCTGGACGGCATTATGA
TGGTCTTAGCTGTGGGTGTGTTTAACATCTTCCATCCAGGATGGCTGCTA
CCTAAGAATGAGGTCAAGCCATTCCACCGCGAGATCTACTCTCCTGACGG
GGTAGCCAGTGGAATGGAGATGCGGTAA back to topCoding sequence (CDS) from alignment at ACJE01000010.1:1610407..1611684+ >ASPNIDRAFT_225596-T1 ID=ASPNIDRAFT_225596-T1|Name=ASPNIDRAFT_225596-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2745bp|location=Sequence derived from alignment at ACJE01000010.1:1610407..1611684+ (Aspergillus niger ATCC 1015)
ATGTCGGGCCTTAATACTACTGCAGAATATGAATTCAAGAAACAATTGAC
CTATGGCTGCCATGCAAAGATCGATGGCTACGGCACCTCATATGGCTACG
TCCCCTCGCTGGCTGCGGGCATTGTATTTTGTGTCCTCTTCGGTCTGTCG
ATGTTGCTCCATACATTGCAGCTGGTGTGGAAGAGGACCTGGTGGTGCTC
TGTCTTCGTTCTTGGATGTATCACGGAGGTCCTGGGCTGGGCAGCACGTA
CCTGGTCTGCTGAATGTCCATACAATGGAACCGCCTTTCTCATGCAAATC
TCTACCTTGATCATCGCCCCCACTTTCTTTACCGCCGGGATCTACGTGCT
CCTGGGCCGTTTCATCCACCTGTTGGGGCCCGAGACCTCAATTTTGAGTC
CGAAACTCTATCTCTGGATTTTCGTCACCTGCGATATCATCTCATTGGTT
GTCCAGGCTGTGGGTGGTGGCATGGCGTCGATGGAAGTCAACAAGGTCAA
CGGCGATACTGCTCCAGGCACGCACACCATGGTCGCCGGTATCGTGTTCC
AGCTGGCGTCTATCACGGTCTTTGTTTTCCTCGCCGCTGATTTCGTCCGT
CGCACTCTCCGTATGCGGATCTTGCAAACCATGACCGGCACGATCATCCC
TCTTCTCGGTGCGATGATCTTCTCTGTCCTCTGCATCTACATCCGGAGTA
TCTATCGAACCATTGAGCTGTCGCAGGGGTGGTCTGGCTACTTGATCACG
CACGAACGGTACTTCATTGTCCTGGACGGCATTATGATGGTCTTAGCTGT
GGGTGTGTTTAACATCTTCCATCCAGGATGGCTGCTACCTAAGAATGAGG
TCAAGCCATTCCACCGCGAGATCTACTCTCCTGACGGGGTAGCCAGTGGA
ATGGAGATGCGGTAAATGTCGGGCCTTAATACTACTGCAGAATATGAATT
CAAGAAACAATTGACCTATGGCTGCCATGCAAAGATCGATGGCTACGGCA
CCTCATATGGCTACGTCCCCTCGCTGGCTGCGGGCATTGTATTTTGTGTC
CTCTTCGGTCTGTCGATGTTGCTCCATACATTGCAGCTGGTGTGGAAGAG
GACCTGGTGGTGCTCTGTCTTCGTTCTTGGATGTATCACGGAGGTCCTGG
GCTGGGCAGCACGTACCTGGTCTGCTGAATGTCCATACAATGGAACCGCC
TTTCTCATGCAAATCTCTACCTTGATCATCGCCCCCACTTTCTTTACCGC
CGGGATCTACGTGCTCCTGGGCCGTTTCATCCACCTGTTGGGGCCCGAGA
CCTCAATTTTGAGTCCGAAACTCTATCTCTGGATTTTCGTCACCTGCGAT
ATCATCTCATTGGTTGTCCAGGCTGTGGGTGGTGGCATGGCGTCGATGGA
AGTCAACAAGGTCAACGGCGATACTGCTCCAGGCACGCACACCATGGTCG
CCGGTATCGTGTTCCAGCTGGCGTCTATCACGGTCTTTGTTTTCCTCGCC
GCTGATTTCGTCCGTCGCACTCTCCGTATGCGGATCTTGCAAACCATGAC
CGGCACGATCATCCCTCTTCTCGGTGCGATGATCTTCTCTGTCCTCTGCA
TCTACATCCGGAGTATCTATCGAACCATTGAGCTGTCGCAGGGGTGGTCT
GGCTACTTGATCACGCACGAACGGTACTTCATTGTCCTGGACGGCATTAT
GATGGTCTTAGCTGTGGGTGTGTTTAACATCTTCCATCCAGGATGGCTGC
TACCTAAGAATGAGGTCAAGCCATTCCACCGCGAGATCTACTCTCCTGAC
GGGGTAGCCAGTGGAATGGAGATGCGGTAAATGTCGGGCCTTAATACTAC
TGCAGAATATGAATTCAAGAAACAATTGACCTATGGCTGCCATGCAAAGA
TCGATGGCTACGGCACCTCATATGGCTACGTCCCCTCGCTGGCTGCGGGC
ATTGTATTTTGTGTCCTCTTCGGTCTGTCGATGTTGCTCCATACATTGCA
GCTGGTGTGGAAGAGGACCTGGTGGTGCTCTGTCTTCGTTCTTGGATGTA
TCACGGAGGTCCTGGGCTGGGCAGCACGTACCTGGTCTGCTGAATGTCCA
TACAATGGAACCGCCTTTCTCATGCAAATCTCTACCTTGATCATCGCCCC
CACTTTCTTTACCGCCGGGATCTACGTGCTCCTGGGCCGTTTCATCCACC
TGTTGGGGCCCGAGACCTCAATTTTGAGTCCGAAACTCTATCTCTGGATT
TTCGTCACCTGCGATATCATCTCATTGGTTGTCCAGGCTGTGGGTGGTGG
CATGGCGTCGATGGAAGTCAACAAGGTCAACGGCGATACTGCTCCAGGCA
CGCACACCATGGTCGCCGGTATCGTGTTCCAGCTGGCGTCTATCACGGTC
TTTGTTTTCCTCGCCGCTGATTTCGTCCGTCGCACTCTCCGTATGCGGAT
CTTGCAAACCATGACCGGCACGATCATCCCTCTTCTCGGTGCGATGATCT
TCTCTGTCCTCTGCATCTACATCCGGAGTATCTATCGAACCATTGAGCTG
TCGCAGGGGTGGTCTGGCTACTTGATCACGCACGAACGGTACTTCATTGT
CCTGGACGGCATTATGATGGTCTTAGCTGTGGGTGTGTTTAACATCTTCC
ATCCAGGATGGCTGCTACCTAAGAATGAGGTCAAGCCATTCCACCGCGAG
ATCTACTCTCCTGACGGGGTAGCCAGTGGAATGGAGATGCGGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR007568 |
| DBxref | PFAM:PF04479 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000010.1 | supercontig | ACJE01000010.1:1610407..1611684 + |
|
