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ASPNIDRAFT_36287-T1, ASPNIDRAFT_36287-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_36287-T1
Unique NameASPNIDRAFT_36287-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:822000..822833-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_36287-T1 ID=ASPNIDRAFT_36287-T1|Name=ASPNIDRAFT_36287-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=834bp|location=Sequence derived from alignment at ACJE01000004.1:822000..822833- (Aspergillus niger ATCC 1015)
ATGGCTGACGAGGTAGGTGTTAACTCTCCTTCTGCGAACTTCCCGGTCTA
CTCAGTTGCGGCCTATCTTTGTCCTGCTTGCTCGGTTGGGTTGGGTGTCT
TCGGGGCCTCGCATCTCGATCGCTGCCCCCCACCCAACCCCCCTCGTTCC
TGCAGACATTGCATATTTTGCTACACTCGCCGACCATCTGCTATAATTTC
AATCATGGGCTAGTTCGCTAATGTTCACCTTTAACAGCACCACGAGACCT
TCGAGTCCGCCGACGCCGGCGCCTCGGCCACCTTCCCCATGCAGTGCTCT
GCCCTGCGCAAGAACGGTCACGTTGTTATCAAGGGCCGCCCCTGCAAGAT
CGTTGAGATGTCCACCTCCAAGACTGGCAAGCACGGTCACGCCAAGGTCC
ACATCGTTGCCATCGATATCTTCACTGGCAAGAAGCTTGAGGATCTGTCC
CCCTCCACCCACAACATGGACGTCCCCAACGTCTACCGCAAGGAATACCA
GCTCGTGAGTAGTTTGGAACATGAACGGTCTTGGTGATCTTGACTCGCTA
ACACAGCTATAGCTTGACGTTACTGACGACGACTTCCTTTCCCTGATGGA
CGAGAACGGTAACACCAAGGACGACGTCAAGGTCCCCGAAGGTGAGGTGG
GCGACCGTATCCGCCGCATGTTCCACGATGAGGAGAAGGACTGCAGTGAG
TAACACCCGTCCGTTTTGGCTAGGTGGCTGTTGGCAAGATTACTGACGAA
TTTTCCTTTTCAGACGTCACCATCCTGTCCTCCATGGGCGAGCAGGTCTG
CATGGATGTCAAGGAGGCTCCCAAGGGCAACTAA
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Coding sequence (CDS) from alignment at ACJE01000004.1:822000..822833-

>ASPNIDRAFT_36287-T1 ID=ASPNIDRAFT_36287-T1|Name=ASPNIDRAFT_36287-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1932bp|location=Sequence derived from alignment at ACJE01000004.1:822000..822833- (Aspergillus niger ATCC 1015)
ACGTCACCATCCTGTCCTCCATGGGCGAGCAGGTCTGCATGGATGTCAAG
GAGGCTCCCAAGGGCAACTAACTTGACGTTACTGACGACGACTTCCTTTC
CCTGATGGACGAGAACGGTAACACCAAGGACGACGTCAAGGTCCCCGAAG
GTGAGGTGGGCGACCGTATCCGCCGCATGTTCCACGATGAGGAGAAGGAC
TGCACACCACGAGACCTTCGAGTCCGCCGACGCCGGCGCCTCGGCCACCT
TCCCCATGCAGTGCTCTGCCCTGCGCAAGAACGGTCACGTTGTTATCAAG
GGCCGCCCCTGCAAGATCGTTGAGATGTCCACCTCCAAGACTGGCAAGCA
CGGTCACGCCAAGGTCCACATCGTTGCCATCGATATCTTCACTGGCAAGA
AGCTTGAGGATCTGTCCCCCTCCACCCACAACATGGACGTCCCCAACGTC
TACCGCAAGGAATACCAGCTCATGGCTGACGAGACGTCACCATCCTGTCC
TCCATGGGCGAGCAGGTCTGCATGGATGTCAAGGAGGCTCCCAAGGGCAA
CTAACTTGACGTTACTGACGACGACTTCCTTTCCCTGATGGACGAGAACG
GTAACACCAAGGACGACGTCAAGGTCCCCGAAGGTGAGGTGGGCGACCGT
ATCCGCCGCATGTTCCACGATGAGGAGAAGGACTGCACACCACGAGACCT
TCGAGTCCGCCGACGCCGGCGCCTCGGCCACCTTCCCCATGCAGTGCTCT
GCCCTGCGCAAGAACGGTCACGTTGTTATCAAGGGCCGCCCCTGCAAGAT
CGTTGAGATGTCCACCTCCAAGACTGGCAAGCACGGTCACGCCAAGGTCC
ACATCGTTGCCATCGATATCTTCACTGGCAAGAAGCTTGAGGATCTGTCC
CCCTCCACCCACAACATGGACGTCCCCAACGTCTACCGCAAGGAATACCA
GCTCATGGCTGACGAGACGTCACCATCCTGTCCTCCATGGGCGAGCAGGT
CTGCATGGATGTCAAGGAGGCTCCCAAGGGCAACTAACTTGACGTTACTG
ACGACGACTTCCTTTCCCTGATGGACGAGAACGGTAACACCAAGGACGAC
GTCAAGGTCCCCGAAGGTGAGGTGGGCGACCGTATCCGCCGCATGTTCCA
CGATGAGGAGAAGGACTGCACACCACGAGACCTTCGAGTCCGCCGACGCC
GGCGCCTCGGCCACCTTCCCCATGCAGTGCTCTGCCCTGCGCAAGAACGG
TCACGTTGTTATCAAGGGCCGCCCCTGCAAGATCGTTGAGATGTCCACCT
CCAAGACTGGCAAGCACGGTCACGCCAAGGTCCACATCGTTGCCATCGAT
ATCTTCACTGGCAAGAAGCTTGAGGATCTGTCCCCCTCCACCCACAACAT
GGACGTCCCCAACGTCTACCGCAAGGAATACCAGCTCATGGCTGACGAGA
CGTCACCATCCTGTCCTCCATGGGCGAGCAGGTCTGCATGGATGTCAAGG
AGGCTCCCAAGGGCAACTAACTTGACGTTACTGACGACGACTTCCTTTCC
CTGATGGACGAGAACGGTAACACCAAGGACGACGTCAAGGTCCCCGAAGG
TGAGGTGGGCGACCGTATCCGCCGCATGTTCCACGATGAGGAGAAGGACT
GCACACCACGAGACCTTCGAGTCCGCCGACGCCGGCGCCTCGGCCACCTT
CCCCATGCAGTGCTCTGCCCTGCGCAAGAACGGTCACGTTGTTATCAAGG
GCCGCCCCTGCAAGATCGTTGAGATGTCCACCTCCAAGACTGGCAAGCAC
GGTCACGCCAAGGTCCACATCGTTGCCATCGATATCTTCACTGGCAAGAA
GCTTGAGGATCTGTCCCCCTCCACCCACAACATGGACGTCCCCAACGTCT
ACCGCAAGGAATACCAGCTCATGGCTGACGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0045905positive regulation of translational termination
GO:0045901positive regulation of translational elongation
GO:0006452translational frameshifting
Vocabulary: Molecular Function
TermDefinition
GO:0003746translation elongation factor activity
GO:0003723RNA binding
GO:0043022ribosome binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ANB1ASPNIDRAFT_36287Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_36287-T1ASPNIDRAFT_36287-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_36287-T1.cdsASPNIDRAFT_36287-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_36287-T1.exon4ASPNIDRAFT_36287-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_36287-T1.exon3ASPNIDRAFT_36287-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_36287-T1.exon2ASPNIDRAFT_36287-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_36287-T1.exon1ASPNIDRAFT_36287-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
DBxrefInterPro:IPR008991
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR019769
DBxrefInterPro:IPR014722
DBxrefInterPro:IPR001884
DBxrefInterPro:IPR020189
DBxrefPFAM:PF01287
Producttranslation initiation factor eIF5A
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:822000..822833 -
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