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ASPNIDRAFT_36333-T1, ASPNIDRAFT_36333-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_36333-T1
Unique NameASPNIDRAFT_36333-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:667958..668911+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_36333-T1 ID=ASPNIDRAFT_36333-T1|Name=ASPNIDRAFT_36333-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=954bp|location=Sequence derived from alignment at ACJE01000004.1:667958..668911+ (Aspergillus niger ATCC 1015)
ATGGATATCGAACCCACCCTTCCTATTCCGATCTCGTATATTGGGGGTAG
CTACTTTCTCTTCTCAATTGATGCAGTTACGTATGTGAGACGCGAGTATC
ACATTTGCGGCGTCTTAAGCGGCACATTGCCTCAAATCCCACAACAGAAT
GTCTTCCTGGGCTTGCCATTGAAGCTAATGCCGGAAGAGGCCCGGTTGCT
CGTGGAGAAAGGTGTAGCATGCATTGTAGACGAGGTAAAAGTCCAAAAGG
ACGGAATGCGAGCCCTCATGGAGGAGGATCGCAAGAAGTATCTCCGTGAG
CTAGAATCTCAAGGCCAGCATGCTATGCGACTACAGAACGACCGGAAGGA
GCAGCAACGCGAGAAGGCTTTAAAGAAAATAGAAGAAAAGAAGGCCGCAA
AGGCCAAAAAGTCTGCTGAAAGGCAGCAGGAGCAGCAGCCTGCCCCTCTT
AATAATGAGGCTGCTGCTCAAGACCCGGTTGTTGACTTGTTCGCAAATGA
CCAGGAGGGTACTGGCGAAATGTCGCGCCGTTCTTCGACTGCCACTGCTG
CTCCCTTTGGCACTGTCATGGGAGTCACGCCTGCTACATCTTATCCGCCT
CTTCCGTATGAGTGGTCTGCTGAGCAACAGCTACCGCTTCCTGATGTGCC
TTCCTCATACCCATTATTCGCTCACCTTCATTCCGAAGGATACTTCTTAT
CCCCTGGGTTGCGATTCGGGTGTCAGTATCTTGCCTATCCCGGTGATCCT
TTACGGTTCCATTCACACTTCCTGAGTGTGTCTGCTGACTGGGATGAGGA
GTTGGATTTGATGAGCATCGTTGCCGGTGGTCGACTAGGTACTGGTGTGA
AGAAGGGTTTCTTGATTGGAGGAGCTGAGAAGAAGATCGAGGGCTCGGAT
GCTGGAGACCCCAGTAGTGTGAGGACTTTCAGCATTGAATGGGGTGGAAT
GTGA
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Coding sequence (CDS) from alignment at ACJE01000004.1:667958..668911+

>ASPNIDRAFT_36333-T1 ID=ASPNIDRAFT_36333-T1|Name=ASPNIDRAFT_36333-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=954bp|location=Sequence derived from alignment at ACJE01000004.1:667958..668911+ (Aspergillus niger ATCC 1015)
ATGGATATCGAACCCACCCTTCCTATTCCGATCTCGTATATTGGGGGTAG
CTACTTTCTCTTCTCAATTGATGCAGTTACGTATGTGAGACGCGAGTATC
ACATTTGCGGCGTCTTAAGCGGCACATTGCCTCAAATCCCACAACAGAAT
GTCTTCCTGGGCTTGCCATTGAAGCTAATGCCGGAAGAGGCCCGGTTGCT
CGTGGAGAAAGGTGTAGCATGCATTGTAGACGAGGTAAAAGTCCAAAAGG
ACGGAATGCGAGCCCTCATGGAGGAGGATCGCAAGAAGTATCTCCGTGAG
CTAGAATCTCAAGGCCAGCATGCTATGCGACTACAGAACGACCGGAAGGA
GCAGCAACGCGAGAAGGCTTTAAAGAAAATAGAAGAAAAGAAGGCCGCAA
AGGCCAAAAAGTCTGCTGAAAGGCAGCAGGAGCAGCAGCCTGCCCCTCTT
AATAATGAGGCTGCTGCTCAAGACCCGGTTGTTGACTTGTTCGCAAATGA
CCAGGAGGGTACTGGCGAAATGTCGCGCCGTTCTTCGACTGCCACTGCTG
CTCCCTTTGGCACTGTCATGGGAGTCACGCCTGCTACATCTTATCCGCCT
CTTCCGTATGAGTGGTCTGCTGAGCAACAGCTACCGCTTCCTGATGTGCC
TTCCTCATACCCATTATTCGCTCACCTTCATTCCGAAGGATACTTCTTAT
CCCCTGGGTTGCGATTCGGGTGTCAGTATCTTGCCTATCCCGGTGATCCT
TTACGGTTCCATTCACACTTCCTGAGTGTGTCTGCTGACTGGGATGAGGA
GTTGGATTTGATGAGCATCGTTGCCGGTGGTCGACTAGGTACTGGTGTGA
AGAAGGGTTTCTTGATTGGAGGAGCTGAGAAGAAGATCGAGGGCTCGGAT
GCTGGAGACCCCAGTAGTGTGAGGACTTTCAGCATTGAATGGGGTGGAAT
GTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000214tRNA-intron endonuclease complex
Vocabulary: Biological Process
TermDefinition
GO:0006388tRNA splicing, via endonucleolytic cleavage and ligation
GO:0000379tRNA-type intron splice site recognition and cleavage
Vocabulary: Molecular Function
TermDefinition
GO:0000213tRNA-intron endonuclease activity
GO:0003676nucleic acid binding
GO:0004518nuclease activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_36333ASPNIDRAFT_36333Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_36333-T1.exon1ASPNIDRAFT_36333-T1.exon1Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_36333-T1.cdsASPNIDRAFT_36333-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_36333-T1ASPNIDRAFT_36333-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09263U71
DBxrefInterPro:IPR036167
DBxrefInterPro:IPR006676
DBxrefInterPro:IPR006677
DBxrefInterPro:IPR016690
DBxrefInterPro:IPR011856
DBxrefPFAM:PF01974
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:667958..668911 +
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