You are here

Home

ASPNIDRAFT_36440-T1, ASPNIDRAFT_36440-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_36440-T1
Unique NameASPNIDRAFT_36440-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:360843..362106+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_36440-T1 ID=ASPNIDRAFT_36440-T1|Name=ASPNIDRAFT_36440-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1264bp|location=Sequence derived from alignment at ACJE01000004.1:360843..362106+ (Aspergillus niger ATCC 1015)
ATGGCACAGCTAGATCTGCCCCAATCCGAGAATACCGTTGAGGTGTTCCT
CATCGATTCGTATGTCTTTTCCTAACAGCTGCAGCTTCCTTGCTACCCAT
TAGCTAATACAATGGCGCACCAGGCAAGCCCGTCTAGATTTCCCAGCTCA
GCAATTCATGCAACCTTATATCAAAGGCTACGATCGCATGAAAGTGCCTT
CCTACAGTTTTCTCATCACACACCCATCGGGCCAACGCGTGTTGTTCGAT
CTATCGATCCGATCCGACTTTCACAATCTCGCGCCCGAGTTTGCGGAGCG
CTGCACGAACACAAAAGACAGCGGATGGAAAATCCACGCGCCGTACAGCG
TCTCTGAAGTACTAGTCAAAAACGGTGTGCCTTTGGAGGAAATCAACGCC
ATCATCTGGTCGCACTTCCATTTCGACCACACCGGTGATCCGGCTTTATT
CCCTAGCTCCACCGATCTCGTCGTGGGACCTGGCTTCATCCGCAACTTCG
CACCTGGATGGCCTGCGCGAGCGGATGCCCCAGTACGGTCCAGTGATTGG
GAAGGGCGGAAACTTCGAGAAGTCAATTTCAACGATGGTGGCGACAAACA
GTTGATGATCGGGCAGTTCCCTGCAATCGACTGGTTTGGTGATGGAAGTT
TCTATTTGCTTCATACCCCAGGCCACACCCCAGACCACCTTGTGGGTTTT
GCTCGAGTGCAGGCGGATTCTTTTGTTCTCATGGGAGCGGTATGTGCTCA
CTTTATTCTTTTCTCTTTCCTCAGAAAAAGGCAGAGAAACAAACAATACA
GCAAATTGCTAACATGCGACGTTTGGAAACAGGATTTTGCCCACCATCCC
GGCGAGTTCAGACCATCTAAGCTCACACCCATCCCACGAAGCATTCAGCC
GTCTCCGCTACCTTCTCATCCTCGATATAGGAGTATCTGCCCAGGTCATA
TCTTTGGCCCCATAGGGCACTACCCCGGGACAAATGATCGTCCTTTCTTC
GAGCCCGCGAAACTGTACACCCATGATTTCGACCAGTGCCTTCGCACAAT
TGAGGGACTAACCGAGTTTGATGCAGATCAACGGGTTTGGGTCCTGACGG
CTCACGACAATAGCCTTTTGCCCATCTTCACTGGCGAAGAGGACAAAGAT
GCTGGATGGTTCTTCCCGCACCGTACCCTCAATGGGTGGCGGCAGGCGGG
TCTAGCGGAGAGAGGGATGTGGCGATTCCTGAGTGATTTCAAAAACGCCA
TCAAGGAAGAGTGA
back to top

Coding sequence (CDS) from alignment at ACJE01000004.1:360843..362106+

>ASPNIDRAFT_36440-T1 ID=ASPNIDRAFT_36440-T1|Name=ASPNIDRAFT_36440-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2394bp|location=Sequence derived from alignment at ACJE01000004.1:360843..362106+ (Aspergillus niger ATCC 1015)
ATGGCACAGCTAGATCTGCCCCAATCCGAGAATACCGTTGAGGTGTTCCT
CATCGATTCGCAAGCCCGTCTAGATTTCCCAGCTCAGCAATTCATGCAAC
CTTATATCAAAGGCTACGATCGCATGAAAGTGCCTTCCTACAGTTTTCTC
ATCACACACCCATCGGGCCAACGCGTGTTGTTCGATCTATCGATCCGATC
CGACTTTCACAATCTCGCGCCCGAGTTTGCGGAGCGCTGCACGAACACAA
AAGACAGCGGATGGAAAATCCACGCGCCGTACAGCGTCTCTGAAGTACTA
GTCAAAAACGGTGTGCCTTTGGAGGAAATCAACGCCATCATCTGGTCGCA
CTTCCATTTCGACCACACCGGTGATCCGGCTTTATTCCCTAGCTCCACCG
ATCTCGTCGTGGGACCTGGCTTCATCCGCAACTTCGCACCTGGATGGCCT
GCGCGAGCGGATGCCCCAGTACGGTCCAGTGATTGGGAAGGGCGGAAACT
TCGAGAAGTCAATTTCAACGATGGTGGCGACAAACAGTTGATGATCGGGC
AGTTCCCTGCAATCGACTGGTTTGGTGATGGAAGTTTCTATTTGCTTCAT
ACCCCAGGCCACACCCCAGACCACCTTGTGGGTTTTGCTCGAGTGCAGGC
GGATTCTTTTGTTCTCATGGGAGCGGACAAAGATGCTGGATGGTTCTTCC
CGCACCGTACCCTCAATGGGTGGCGGCAGGCGGGTCTAGCGGAGAGAGGG
ATGTGGCGATTCCTGAGTGATTTCAAAAACGCCATCAAGGAAGAGTGAAT
GGCACAGCTAGATCTGCCCCAATCCGAGAATACCGTTGAGGTGTTCCTCA
TCGATTCGCAAGCCCGTCTAGATTTCCCAGCTCAGCAATTCATGCAACCT
TATATCAAAGGCTACGATCGCATGAAAGTGCCTTCCTACAGTTTTCTCAT
CACACACCCATCGGGCCAACGCGTGTTGTTCGATCTATCGATCCGATCCG
ACTTTCACAATCTCGCGCCCGAGTTTGCGGAGCGCTGCACGAACACAAAA
GACAGCGGATGGAAAATCCACGCGCCGTACAGCGTCTCTGAAGTACTAGT
CAAAAACGGTGTGCCTTTGGAGGAAATCAACGCCATCATCTGGTCGCACT
TCCATTTCGACCACACCGGTGATCCGGCTTTATTCCCTAGCTCCACCGAT
CTCGTCGTGGGACCTGGCTTCATCCGCAACTTCGCACCTGGATGGCCTGC
GCGAGCGGATGCCCCAGTACGGTCCAGTGATTGGGAAGGGCGGAAACTTC
GAGAAGTCAATTTCAACGATGGTGGCGACAAACAGTTGATGATCGGGCAG
TTCCCTGCAATCGACTGGTTTGGTGATGGAAGTTTCTATTTGCTTCATAC
CCCAGGCCACACCCCAGACCACCTTGTGGGTTTTGCTCGAGTGCAGGCGG
ATTCTTTTGTTCTCATGGGAGCGGACAAAGATGCTGGATGGTTCTTCCCG
CACCGTACCCTCAATGGGTGGCGGCAGGCGGGTCTAGCGGAGAGAGGGAT
GTGGCGATTCCTGAGTGATTTCAAAAACGCCATCAAGGAAGAGTGAATGG
CACAGCTAGATCTGCCCCAATCCGAGAATACCGTTGAGGTGTTCCTCATC
GATTCGCAAGCCCGTCTAGATTTCCCAGCTCAGCAATTCATGCAACCTTA
TATCAAAGGCTACGATCGCATGAAAGTGCCTTCCTACAGTTTTCTCATCA
CACACCCATCGGGCCAACGCGTGTTGTTCGATCTATCGATCCGATCCGAC
TTTCACAATCTCGCGCCCGAGTTTGCGGAGCGCTGCACGAACACAAAAGA
CAGCGGATGGAAAATCCACGCGCCGTACAGCGTCTCTGAAGTACTAGTCA
AAAACGGTGTGCCTTTGGAGGAAATCAACGCCATCATCTGGTCGCACTTC
CATTTCGACCACACCGGTGATCCGGCTTTATTCCCTAGCTCCACCGATCT
CGTCGTGGGACCTGGCTTCATCCGCAACTTCGCACCTGGATGGCCTGCGC
GAGCGGATGCCCCAGTACGGTCCAGTGATTGGGAAGGGCGGAAACTTCGA
GAAGTCAATTTCAACGATGGTGGCGACAAACAGTTGATGATCGGGCAGTT
CCCTGCAATCGACTGGTTTGGTGATGGAAGTTTCTATTTGCTTCATACCC
CAGGCCACACCCCAGACCACCTTGTGGGTTTTGCTCGAGTGCAGGCGGAT
TCTTTTGTTCTCATGGGAGCGGACAAAGATGCTGGATGGTTCTTCCCGCA
CCGTACCCTCAATGGGTGGCGGCAGGCGGGTCTAGCGGAGAGAGGGATGT
GGCGATTCCTGAGTGATTTCAAAAACGCCATCAAGGAAGAGTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_36440ASPNIDRAFT_36440Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_36440-T1.exon1ASPNIDRAFT_36440-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_36440-T1.exon2ASPNIDRAFT_36440-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_36440-T1.exon3ASPNIDRAFT_36440-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_36440-T1.cdsASPNIDRAFT_36440-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_36440-T1ASPNIDRAFT_36440-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036866
DBxrefInterPro:IPR001279
DBxrefPFAM:PF00753
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:360843..362106 +
Powered by Drupal