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ASPNIDRAFT_36465-T1, ASPNIDRAFT_36465-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_36465-T1
Unique NameASPNIDRAFT_36465-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:281025..281738+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_36465-T1 ID=ASPNIDRAFT_36465-T1|Name=ASPNIDRAFT_36465-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=714bp|location=Sequence derived from alignment at ACJE01000004.1:281025..281738+ (Aspergillus niger ATCC 1015)
ATGTCAGATCGCGAATTTAGTGGTACGTTCTTTGCCAGATTACTTCCTGG
CGCGATATTATGATGTCAAGCTAACTTGCGATTTTCCTAGCGAACGACGA
CTTGTCGCTACCTAAAGGTATGTCGCCTTCCGCCGTGTTGTCGCGTCGCA
TCGACTCCCCCACTTTTGAGGGCAGTGGGACTCGTCGCCCTTTGATTTGC
CTACCTCGGACTCAGTATAAAATATAATCAAATATCCATTATATACTAAA
TCGCAAACCATACTCACAGCGACGGTCCAAAAGATCATCACCGAGATCCT
ACCTCCTTCATCCGGCCAGACATTCTCCAAAGATGCTCGCGATCTCCTCA
TGGAATGCTGCGTTGAATTCATCACTTTGATCTCCTCCGAAGCCAATGAT
ATCAGTGAAAAGGAAGCCAAGAAGACCATCGCCTGCGAACATGTCGAGCG
CGCCCTCCGTGATCTCGGTTTCAGCGACTACATTCCCGATGTCCTTGCTG
TCGCAGAGGAACACAAAGAGCAGTTGAAGGTATGTGGCTGATACCATTAC
CTTGTTTGTGGCATTGTCCGGCTAACACAGATCGATTACACTAGTCGCGA
GAGAAGAAGCAGAGCAAGATGGAGCAGAGCGGGTTGTCCGAGGAGGAGCT
TCTACGGCAGCAACAGGAGTTGTTCCGCTCAGCTACTGAGAAGTATCACG
CTGCTCCGGAGTGA
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Coding sequence (CDS) from alignment at ACJE01000004.1:281025..281738+

>ASPNIDRAFT_36465-T1 ID=ASPNIDRAFT_36465-T1|Name=ASPNIDRAFT_36465-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1716bp|location=Sequence derived from alignment at ACJE01000004.1:281025..281738+ (Aspergillus niger ATCC 1015)
ATGTCAGATCGCGAATTTAGTGCGAACGACGACTTGTCGCTACCTAAAGC
GACGGTCCAAAAGATCATCACCGAGATCCTACCTCCTTCATCCGGCCAGA
CATTCTCCAAAGATGCTCGCGATCTCCTCATGGAATGCTGCGTTGAATTC
ATCACTTTGATCTCCTCCGAAGCCAATGATATCAGTGAAAAGGAAGCCAA
GAAGACCATCGCCTGCGAACATGTCGAGCGCGCCCTCCGTGATCTCGGTT
TCAGCGACTACATTCCCGATGTCCTTGCTGTCGCAGAGGAACACAAAGAG
CAGTTGAAGTCGCGAGAGAAGAAGCAGAGCAAGATGGAGCAGAGCGGGTT
GTCCGAGGAGGAGCTTCTACGGCAGCAACAGGAGTTGTTCCGCTCAGCTA
CTGAGAAGTATCACGCTGCTCCGGAGTGAATGTCAGATCGCGAATTTAGT
GCGAACGACGACTTGTCGCTACCTAAAGCGACGGTCCAAAAGATCATCAC
CGAGATCCTACCTCCTTCATCCGGCCAGACATTCTCCAAAGATGCTCGCG
ATCTCCTCATGGAATGCTGCGTTGAATTCATCACTTTGATCTCCTCCGAA
GCCAATGATATCAGTGAAAAGGAAGCCAAGAAGACCATCGCCTGCGAACA
TGTCGAGCGCGCCCTCCGTGATCTCGGTTTCAGCGACTACATTCCCGATG
TCCTTGCTGTCGCAGAGGAACACAAAGAGCAGTTGAAGTCGCGAGAGAAG
AAGCAGAGCAAGATGGAGCAGAGCGGGTTGTCCGAGGAGGAGCTTCTACG
GCAGCAACAGGAGTTGTTCCGCTCAGCTACTGAGAAGTATCACGCTGCTC
CGGAGTGAATGTCAGATCGCGAATTTAGTGCGAACGACGACTTGTCGCTA
CCTAAAGCGACGGTCCAAAAGATCATCACCGAGATCCTACCTCCTTCATC
CGGCCAGACATTCTCCAAAGATGCTCGCGATCTCCTCATGGAATGCTGCG
TTGAATTCATCACTTTGATCTCCTCCGAAGCCAATGATATCAGTGAAAAG
GAAGCCAAGAAGACCATCGCCTGCGAACATGTCGAGCGCGCCCTCCGTGA
TCTCGGTTTCAGCGACTACATTCCCGATGTCCTTGCTGTCGCAGAGGAAC
ACAAAGAGCAGTTGAAGTCGCGAGAGAAGAAGCAGAGCAAGATGGAGCAG
AGCGGGTTGTCCGAGGAGGAGCTTCTACGGCAGCAACAGGAGTTGTTCCG
CTCAGCTACTGAGAAGTATCACGCTGCTCCGGAGTGAATGTCAGATCGCG
AATTTAGTGCGAACGACGACTTGTCGCTACCTAAAGCGACGGTCCAAAAG
ATCATCACCGAGATCCTACCTCCTTCATCCGGCCAGACATTCTCCAAAGA
TGCTCGCGATCTCCTCATGGAATGCTGCGTTGAATTCATCACTTTGATCT
CCTCCGAAGCCAATGATATCAGTGAAAAGGAAGCCAAGAAGACCATCGCC
TGCGAACATGTCGAGCGCGCCCTCCGTGATCTCGGTTTCAGCGACTACAT
TCCCGATGTCCTTGCTGTCGCAGAGGAACACAAAGAGCAGTTGAAGTCGC
GAGAGAAGAAGCAGAGCAAGATGGAGCAGAGCGGGTTGTCCGAGGAGGAG
CTTCTACGGCAGCAACAGGAGTTGTTCCGCTCAGCTACTGAGAAGTATCA
CGCTGCTCCGGAGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0046982protein heterodimerization activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NCB2ASPNIDRAFT_36465Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_36465-T1.exon1ASPNIDRAFT_36465-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_36465-T1.exon2ASPNIDRAFT_36465-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_36465-T1.exon3ASPNIDRAFT_36465-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_36465-T1.exon4ASPNIDRAFT_36465-T1.exon4Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_36465-T1.cdsASPNIDRAFT_36465-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_36465-T1ASPNIDRAFT_36465-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR009072
DBxrefInterPro:IPR003958
DBxrefPFAM:PF00125
DBxrefPFAM:PF00808
Productnegative cofactor 2 transcription regulator complex subunit ncb2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:281025..281738 +
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