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ASPNIDRAFT_36469-T1, ASPNIDRAFT_36469-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_36469-T1
Unique NameASPNIDRAFT_36469-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:273552..274702-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_36469-T1 ID=ASPNIDRAFT_36469-T1|Name=ASPNIDRAFT_36469-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1151bp|location=Sequence derived from alignment at ACJE01000004.1:273552..274702- (Aspergillus niger ATCC 1015)
ATGCCCCGATACGCAGAAGACCACGACCGCTACGATGACAGCAACCGCGC
ATTTCTCCAAGCCTTCATGGCGCGGTCCACCATGACCTTTACACAAGCAA
AGCCCGTTCTGGCTGCTATATTCTCCATCCGAGGTAATCCTCCCATACTC
ATACACCAAAATACCAAACTAAATCCGGATCAATATAGACGACGAACAAA
TCTCCCCAGAAGACATAACGGAAGACGACCTCCAAACCTACATCGCCGCC
GCTAACAGCGCCATATCCCCCTTCGACCTCGAAATCCGGAGCATACTACC
CCAGATTGAAATCAACAACAACAATGACCCTCCCCCAGCTCCGGAACGAG
TCTACGCCCTCGTCAACACAACCAGCGACGCCCTCACCCAGCTCGCAACA
ACATACTCCGCCGACGAAATCGCCTTCGTGAAGCGCATCCTCGACGCTAT
GTTCGACACATACAATACCCGCCGCCAGGAAGCAATGGTCATAAGTAGTA
TGCAGGCATTGCAGCTGGCCAAGGCTGGTGCAGGGGACGCAAATAGACGG
GAGTCAGGGACACAGCAGCAAGCGACGCAGGGAGGCGCGGCGCAGTCGCT
GACTATGACGCAGGCGGAGACGATGCTGAAGCAGCTTGTCGAGCAGGGGT
GGTTTGAGAAGAGCAGGAAGGGGTATTATCGGTTGAGTCCGCGCGGGTTG
ATGGAGTTGAGGGGGTGGTTGGTGGCGGCGTATAATGATGAGGGGATTAG
GAAGATTAAGTTCTGTGCTGCGTGTAGGGATATCATTACTGCTGTGAGTT
GGAGAGTATTCCTTGCTATGCGGGCTTGTTGGCTAATGATTCTGTGATTG
TGACCAGGGCCAACGATGCGGAGACCGCGATTGTACTGGACGATTGCACG
ACCACTGCATGCGGAATTTCTTTCGTATGCAACAGGCTGAAAGCTGTCCT
GTGTGCAAGACTGCGTGGCCGGGTGATAGATACGTTGGTGAGCGCGCGAT
TACTATGTCTGATCCGGCTGCGCAGAGGGCTAGACGGTCGGCTGCGAATA
CTCAGCAGGCGGAAGCTGGGCCTAGTACGCAGTTCACGTTGCCGGAACTG
GATGTTGAAGATGAAGCGGATGGTGGTGAGGAAGAGGCTGGGAGTGATTG
A
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Coding sequence (CDS) from alignment at ACJE01000004.1:273552..274702-

>ASPNIDRAFT_36469-T1 ID=ASPNIDRAFT_36469-T1|Name=ASPNIDRAFT_36469-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3096bp|location=Sequence derived from alignment at ACJE01000004.1:273552..274702- (Aspergillus niger ATCC 1015)
GGCCAACGATGCGGAGACCGCGATTGTACTGGACGATTGCACGACCACTG
CATGCGGAATTTCTTTCGTATGCAACAGGCTGAAAGCTGTCCTGTGTGCA
AGACTGCGTGGCCGGGTGATAGATACGTTGGTGAGCGCGCGATTACTATG
TCTGATCCGGCTGCGCAGAGGGCTAGACGGTCGGCTGCGAATACTCAGCA
GGCGGAAGCTGGGCCTAGTACGCAGTTCACGTTGCCGGAACTGGATGTTG
AAGATGAAGCGGATGGTGGTGAGGAAGAGGCTGGGAGTGATTGAACGACG
AACAAATCTCCCCAGAAGACATAACGGAAGACGACCTCCAAACCTACATC
GCCGCCGCTAACAGCGCCATATCCCCCTTCGACCTCGAAATCCGGAGCAT
ACTACCCCAGATTGAAATCAACAACAACAATGACCCTCCCCCAGCTCCGG
AACGAGTCTACGCCCTCGTCAACACAACCAGCGACGCCCTCACCCAGCTC
GCAACAACATACTCCGCCGACGAAATCGCCTTCGTGAAGCGCATCCTCGA
CGCTATGTTCGACACATACAATACCCGCCGCCAGGAAGCAATGGTCATAA
GTAGTATGCAGGCATTGCAGCTGGCCAAGGCTGGTGCAGGGGACGCAAAT
AGACGGGAGTCAGGGACACAGCAGCAAGCGACGCAGGGAGGCGCGGCGCA
GTCGCTGACTATGACGCAGGCGGAGACGATGCTGAAGCAGCTTGTCGAGC
AGGGGTGGTTTGAGAAGAGCAGGAAGGGGTATTATCGGTTGAGTCCGCGC
GGGTTGATGGAGTTGAGGGGGTGGTTGGTGGCGGCGTATAATGATGAGGG
GATTAGGAAGATTAAGTTCTGTGCTGCGTGTAGGGATATCATTACTGCTA
TGCCCCGATACGCAGAAGACCACGACCGCTACGATGACAGCAACCGCGCA
TTTCTCCAAGCCTTCATGGCGCGGTCCACCATGACCTTTACACAAGCAAA
GCCCGTTCTGGCTGCTATATTCTCCATCCGAGGGCCAACGATGCGGAGAC
CGCGATTGTACTGGACGATTGCACGACCACTGCATGCGGAATTTCTTTCG
TATGCAACAGGCTGAAAGCTGTCCTGTGTGCAAGACTGCGTGGCCGGGTG
ATAGATACGTTGGTGAGCGCGCGATTACTATGTCTGATCCGGCTGCGCAG
AGGGCTAGACGGTCGGCTGCGAATACTCAGCAGGCGGAAGCTGGGCCTAG
TACGCAGTTCACGTTGCCGGAACTGGATGTTGAAGATGAAGCGGATGGTG
GTGAGGAAGAGGCTGGGAGTGATTGAACGACGAACAAATCTCCCCAGAAG
ACATAACGGAAGACGACCTCCAAACCTACATCGCCGCCGCTAACAGCGCC
ATATCCCCCTTCGACCTCGAAATCCGGAGCATACTACCCCAGATTGAAAT
CAACAACAACAATGACCCTCCCCCAGCTCCGGAACGAGTCTACGCCCTCG
TCAACACAACCAGCGACGCCCTCACCCAGCTCGCAACAACATACTCCGCC
GACGAAATCGCCTTCGTGAAGCGCATCCTCGACGCTATGTTCGACACATA
CAATACCCGCCGCCAGGAAGCAATGGTCATAAGTAGTATGCAGGCATTGC
AGCTGGCCAAGGCTGGTGCAGGGGACGCAAATAGACGGGAGTCAGGGACA
CAGCAGCAAGCGACGCAGGGAGGCGCGGCGCAGTCGCTGACTATGACGCA
GGCGGAGACGATGCTGAAGCAGCTTGTCGAGCAGGGGTGGTTTGAGAAGA
GCAGGAAGGGGTATTATCGGTTGAGTCCGCGCGGGTTGATGGAGTTGAGG
GGGTGGTTGGTGGCGGCGTATAATGATGAGGGGATTAGGAAGATTAAGTT
CTGTGCTGCGTGTAGGGATATCATTACTGCTATGCCCCGATACGCAGAAG
ACCACGACCGCTACGATGACAGCAACCGCGCATTTCTCCAAGCCTTCATG
GCGCGGTCCACCATGACCTTTACACAAGCAAAGCCCGTTCTGGCTGCTAT
ATTCTCCATCCGAGGGCCAACGATGCGGAGACCGCGATTGTACTGGACGA
TTGCACGACCACTGCATGCGGAATTTCTTTCGTATGCAACAGGCTGAAAG
CTGTCCTGTGTGCAAGACTGCGTGGCCGGGTGATAGATACGTTGGTGAGC
GCGCGATTACTATGTCTGATCCGGCTGCGCAGAGGGCTAGACGGTCGGCT
GCGAATACTCAGCAGGCGGAAGCTGGGCCTAGTACGCAGTTCACGTTGCC
GGAACTGGATGTTGAAGATGAAGCGGATGGTGGTGAGGAAGAGGCTGGGA
GTGATTGAACGACGAACAAATCTCCCCAGAAGACATAACGGAAGACGACC
TCCAAACCTACATCGCCGCCGCTAACAGCGCCATATCCCCCTTCGACCTC
GAAATCCGGAGCATACTACCCCAGATTGAAATCAACAACAACAATGACCC
TCCCCCAGCTCCGGAACGAGTCTACGCCCTCGTCAACACAACCAGCGACG
CCCTCACCCAGCTCGCAACAACATACTCCGCCGACGAAATCGCCTTCGTG
AAGCGCATCCTCGACGCTATGTTCGACACATACAATACCCGCCGCCAGGA
AGCAATGGTCATAAGTAGTATGCAGGCATTGCAGCTGGCCAAGGCTGGTG
CAGGGGACGCAAATAGACGGGAGTCAGGGACACAGCAGCAAGCGACGCAG
GGAGGCGCGGCGCAGTCGCTGACTATGACGCAGGCGGAGACGATGCTGAA
GCAGCTTGTCGAGCAGGGGTGGTTTGAGAAGAGCAGGAAGGGGTATTATC
GGTTGAGTCCGCGCGGGTTGATGGAGTTGAGGGGGTGGTTGGTGGCGGCG
TATAATGATGAGGGGATTAGGAAGATTAAGTTCTGTGCTGCGTGTAGGGA
TATCATTACTGCTATGCCCCGATACGCAGAAGACCACGACCGCTACGATG
ACAGCAACCGCGCATTTCTCCAAGCCTTCATGGCGCGGTCCACCATGACC
TTTACACAAGCAAAGCCCGTTCTGGCTGCTATATTCTCCATCCGAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0030915Smc5-Smc6 complex
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_36469ASPNIDRAFT_36469Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_36469-T1ASPNIDRAFT_36469-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_36469-T1.cdsASPNIDRAFT_36469-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_36469-T1.exon3ASPNIDRAFT_36469-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_36469-T1.exon2ASPNIDRAFT_36469-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_36469-T1.exon1ASPNIDRAFT_36469-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG092645L9
DBxrefInterPro:IPR001841
DBxrefInterPro:IPR013083
DBxrefInterPro:IPR011513
DBxrefInterPro:IPR036388
DBxrefInterPro:IPR014857
DBxrefPFAM:PF08746
DBxrefPFAM:PF07574
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:273552..274702 -
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