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ASPNIDRAFT_37406-T1, ASPNIDRAFT_37406-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_37406-T1
Unique NameASPNIDRAFT_37406-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:2987957..2989599-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_37406-T1 ID=ASPNIDRAFT_37406-T1|Name=ASPNIDRAFT_37406-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1643bp|location=Sequence derived from alignment at ACJE01000010.1:2987957..2989599- (Aspergillus niger ATCC 1015)
ATGGCTTCTAACGACAAGGGCTTGGAGGAGATCCCCGAGGGTATGTGCTA
CTAAAACATCTTTTGCTTTATGCTTTTTTTTTTCTTTTCCTACAAAAGCG
AGTTTGTGGTTTTTATCGATCACTTTGCTGGAGATTGGGGCTCGCTCCCA
AGTCAGCAGAGGAAAGAGAGATAACCGCCACATTCCATCATCGGAACATC
TTTCAAAAGAAACAAGCTGACCAGAAACTTCACCTCAATAGGACAGATCG
AGACTAACTACGATGAGGTTACCGACTCTTTCGACTCCATGGACCTGAAG
CCCGAGCTGCTTCGCGGTATGTGATACAAATTTTATCATCGCCCTGGTGG
GGTCTGTGCCAACATGTTCTGACGACGTCCAGGTGTCTACGCCTACGGTT
TTGAGCGTCCCTCCGCTATCCAGCAGCGTGCCATCAAGCCCATCATTGCC
GGTACGTCTCCCCCCCGCGCGATCGCCTATAATCTATGATGCTAACTAGA
GCATCCCAGGCCACGATGTCATTGCTCAGGCTCAGTCTGGTACCGGAAAG
ACTGCCACTTTCTCCATCTCCGCTCTCCAGAAGATTGACCAGGAGCTCAA
GGCTTGCCAGGCTCTGATTGTCGCTCCCACCCGTGAGTTGGCTCAGCAGA
TCCAGAAGGTCGTTGTTGCCATTGGTGACTTCATGAACATTGAGTGCCAC
GCCTGCATTGGTGGTACCAACGTCCGTGACGACATGAACGCCCTCCGCGC
CGGCCCCCAGGTCGTTGTCGGTACCCCCGGTCGTATCCACGATATGATTG
AGCGCCGTGTCCTCAAGACCGACCAGATGAAGCTCTTCATCCTCGACGAG
GCTGATGAGATGCTTTCTGTAAGTCCATACCAGATCTGGGCCCAGGGAAG
ACGTGCCTTTGCTAATAAATGTGATTAGCGTGGTTTCACCGAGCAAATCT
ACGACATCTTCCAGCTCCTCCCCCAGTCTACCCAGGTCACCCTGCTGTCC
GCTACCATGCCCCAGGATGTCCTTGAGGTCACCACCAAGTTCATGCGTGA
CCCCATCCGTATCCTGGTCAAGAAGCAGGAGCTTACCCTTGAGGGTATCA
AGCAGTTCTACATTGCTGTTGAGAAGGAGGAGTGGAAGCTCGACACCCTC
TCCGATCTCTACGAGACCGTCACCATTACCCAGGCCGTCATCTTCTGTAA
CACCCGCCGCAAGGTCGACTGGCTCACTGACAAGCTCACTGCCCGTGACT
TCACCGTCTCTGCCATGCACGGTGACATGGAGCAGGGCCAGCGTGATGTT
ATCATGAAGGAGTTCCGTTCCGGATCTTCCCGTGTCCTGATCGCCACTGA
CCTTCTGGCCCGTGGTATCGATGTCCAGCAGGTCTCCCTGGTCATCAACT
ACGACCTTCCCGCCAACCGTGAGAACTACATCCACCGTATCGGTCGTGGT
GGTCGTTTCGGTCGTAAGGGTGTTGCCATCAACTTCGTCACCGCTGACGA
TGTCCGCATGATGCGTGAGATTGAGCAGTTCTACAGCACCCAGATCGAGG
AGATGCCCATGAACGTTGCTGGTAAGCTAGCCTTCACCCACACTCTGATT
ATCGTATCTTCCATACTGATTTTTGGTTCCAGACCTCATCTAA
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Coding sequence (CDS) from alignment at ACJE01000010.1:2987957..2989599-

>ASPNIDRAFT_37406-T1 ID=ASPNIDRAFT_37406-T1|Name=ASPNIDRAFT_37406-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=7182bp|location=Sequence derived from alignment at ACJE01000010.1:2987957..2989599- (Aspergillus niger ATCC 1015)
ACCTCATCTAACGTGGTTTCACCGAGCAAATCTACGACATCTTCCAGCTC
CTCCCCCAGTCTACCCAGGTCACCCTGCTGTCCGCTACCATGCCCCAGGA
TGTCCTTGAGGTCACCACCAAGTTCATGCGTGACCCCATCCGTATCCTGG
TCAAGAAGCAGGAGCTTACCCTTGAGGGTATCAAGCAGTTCTACATTGCT
GTTGAGAAGGAGGAGTGGAAGCTCGACACCCTCTCCGATCTCTACGAGAC
CGTCACCATTACCCAGGCCGTCATCTTCTGTAACACCCGCCGCAAGGTCG
ACTGGCTCACTGACAAGCTCACTGCCCGTGACTTCACCGTCTCTGCCATG
CACGGTGACATGGAGCAGGGCCAGCGTGATGTTATCATGAAGGAGTTCCG
TTCCGGATCTTCCCGTGTCCTGATCGCCACTGACCTTCTGGCCCGTGGTA
TCGATGTCCAGCAGGTCTCCCTGGTCATCAACTACGACCTTCCCGCCAAC
CGTGAGAACTACATCCACCGTATCGGTCGTGGTGGTCGTTTCGGTCGTAA
GGGTGTTGCCATCAACTTCGTCACCGCTGACGATGTCCGCATGATGCGTG
AGATTGAGCAGTTCTACAGCACCCAGATCGAGGAGATGCCCATGAACGTT
GCTGGCCACGATGTCATTGCTCAGGCTCAGTCTGGTACCGGAAAGACTGC
CACTTTCTCCATCTCCGCTCTCCAGAAGATTGACCAGGAGCTCAAGGCTT
GCCAGGCTCTGATTGTCGCTCCCACCCGTGAGTTGGCTCAGCAGATCCAG
AAGGTCGTTGTTGCCATTGGTGACTTCATGAACATTGAGTGCCACGCCTG
CATTGGTGGTACCAACGTCCGTGACGACATGAACGCCCTCCGCGCCGGCC
CCCAGGTCGTTGTCGGTACCCCCGGTCGTATCCACGATATGATTGAGCGC
CGTGTCCTCAAGACCGACCAGATGAAGCTCTTCATCCTCGACGAGGCTGA
TGAGATGCTTTCTGTGTCTACGCCTACGGTTTTGAGCGTCCCTCCGCTAT
CCAGCAGCGTGCCATCAAGCCCATCATTGCCGGACAGATCGAGACTAACT
ACGATGAGGTTACCGACTCTTTCGACTCCATGGACCTGAAGCCCGAGCTG
CTTCGCGATGGCTTCTAACGACAAGGGCTTGGAGGAGATCCCCGAGGACC
TCATCTAACGTGGTTTCACCGAGCAAATCTACGACATCTTCCAGCTCCTC
CCCCAGTCTACCCAGGTCACCCTGCTGTCCGCTACCATGCCCCAGGATGT
CCTTGAGGTCACCACCAAGTTCATGCGTGACCCCATCCGTATCCTGGTCA
AGAAGCAGGAGCTTACCCTTGAGGGTATCAAGCAGTTCTACATTGCTGTT
GAGAAGGAGGAGTGGAAGCTCGACACCCTCTCCGATCTCTACGAGACCGT
CACCATTACCCAGGCCGTCATCTTCTGTAACACCCGCCGCAAGGTCGACT
GGCTCACTGACAAGCTCACTGCCCGTGACTTCACCGTCTCTGCCATGCAC
GGTGACATGGAGCAGGGCCAGCGTGATGTTATCATGAAGGAGTTCCGTTC
CGGATCTTCCCGTGTCCTGATCGCCACTGACCTTCTGGCCCGTGGTATCG
ATGTCCAGCAGGTCTCCCTGGTCATCAACTACGACCTTCCCGCCAACCGT
GAGAACTACATCCACCGTATCGGTCGTGGTGGTCGTTTCGGTCGTAAGGG
TGTTGCCATCAACTTCGTCACCGCTGACGATGTCCGCATGATGCGTGAGA
TTGAGCAGTTCTACAGCACCCAGATCGAGGAGATGCCCATGAACGTTGCT
GGCCACGATGTCATTGCTCAGGCTCAGTCTGGTACCGGAAAGACTGCCAC
TTTCTCCATCTCCGCTCTCCAGAAGATTGACCAGGAGCTCAAGGCTTGCC
AGGCTCTGATTGTCGCTCCCACCCGTGAGTTGGCTCAGCAGATCCAGAAG
GTCGTTGTTGCCATTGGTGACTTCATGAACATTGAGTGCCACGCCTGCAT
TGGTGGTACCAACGTCCGTGACGACATGAACGCCCTCCGCGCCGGCCCCC
AGGTCGTTGTCGGTACCCCCGGTCGTATCCACGATATGATTGAGCGCCGT
GTCCTCAAGACCGACCAGATGAAGCTCTTCATCCTCGACGAGGCTGATGA
GATGCTTTCTGTGTCTACGCCTACGGTTTTGAGCGTCCCTCCGCTATCCA
GCAGCGTGCCATCAAGCCCATCATTGCCGGACAGATCGAGACTAACTACG
ATGAGGTTACCGACTCTTTCGACTCCATGGACCTGAAGCCCGAGCTGCTT
CGCGATGGCTTCTAACGACAAGGGCTTGGAGGAGATCCCCGAGGACCTCA
TCTAACGTGGTTTCACCGAGCAAATCTACGACATCTTCCAGCTCCTCCCC
CAGTCTACCCAGGTCACCCTGCTGTCCGCTACCATGCCCCAGGATGTCCT
TGAGGTCACCACCAAGTTCATGCGTGACCCCATCCGTATCCTGGTCAAGA
AGCAGGAGCTTACCCTTGAGGGTATCAAGCAGTTCTACATTGCTGTTGAG
AAGGAGGAGTGGAAGCTCGACACCCTCTCCGATCTCTACGAGACCGTCAC
CATTACCCAGGCCGTCATCTTCTGTAACACCCGCCGCAAGGTCGACTGGC
TCACTGACAAGCTCACTGCCCGTGACTTCACCGTCTCTGCCATGCACGGT
GACATGGAGCAGGGCCAGCGTGATGTTATCATGAAGGAGTTCCGTTCCGG
ATCTTCCCGTGTCCTGATCGCCACTGACCTTCTGGCCCGTGGTATCGATG
TCCAGCAGGTCTCCCTGGTCATCAACTACGACCTTCCCGCCAACCGTGAG
AACTACATCCACCGTATCGGTCGTGGTGGTCGTTTCGGTCGTAAGGGTGT
TGCCATCAACTTCGTCACCGCTGACGATGTCCGCATGATGCGTGAGATTG
AGCAGTTCTACAGCACCCAGATCGAGGAGATGCCCATGAACGTTGCTGGC
CACGATGTCATTGCTCAGGCTCAGTCTGGTACCGGAAAGACTGCCACTTT
CTCCATCTCCGCTCTCCAGAAGATTGACCAGGAGCTCAAGGCTTGCCAGG
CTCTGATTGTCGCTCCCACCCGTGAGTTGGCTCAGCAGATCCAGAAGGTC
GTTGTTGCCATTGGTGACTTCATGAACATTGAGTGCCACGCCTGCATTGG
TGGTACCAACGTCCGTGACGACATGAACGCCCTCCGCGCCGGCCCCCAGG
TCGTTGTCGGTACCCCCGGTCGTATCCACGATATGATTGAGCGCCGTGTC
CTCAAGACCGACCAGATGAAGCTCTTCATCCTCGACGAGGCTGATGAGAT
GCTTTCTGTGTCTACGCCTACGGTTTTGAGCGTCCCTCCGCTATCCAGCA
GCGTGCCATCAAGCCCATCATTGCCGGACAGATCGAGACTAACTACGATG
AGGTTACCGACTCTTTCGACTCCATGGACCTGAAGCCCGAGCTGCTTCGC
GATGGCTTCTAACGACAAGGGCTTGGAGGAGATCCCCGAGGACCTCATCT
AACGTGGTTTCACCGAGCAAATCTACGACATCTTCCAGCTCCTCCCCCAG
TCTACCCAGGTCACCCTGCTGTCCGCTACCATGCCCCAGGATGTCCTTGA
GGTCACCACCAAGTTCATGCGTGACCCCATCCGTATCCTGGTCAAGAAGC
AGGAGCTTACCCTTGAGGGTATCAAGCAGTTCTACATTGCTGTTGAGAAG
GAGGAGTGGAAGCTCGACACCCTCTCCGATCTCTACGAGACCGTCACCAT
TACCCAGGCCGTCATCTTCTGTAACACCCGCCGCAAGGTCGACTGGCTCA
CTGACAAGCTCACTGCCCGTGACTTCACCGTCTCTGCCATGCACGGTGAC
ATGGAGCAGGGCCAGCGTGATGTTATCATGAAGGAGTTCCGTTCCGGATC
TTCCCGTGTCCTGATCGCCACTGACCTTCTGGCCCGTGGTATCGATGTCC
AGCAGGTCTCCCTGGTCATCAACTACGACCTTCCCGCCAACCGTGAGAAC
TACATCCACCGTATCGGTCGTGGTGGTCGTTTCGGTCGTAAGGGTGTTGC
CATCAACTTCGTCACCGCTGACGATGTCCGCATGATGCGTGAGATTGAGC
AGTTCTACAGCACCCAGATCGAGGAGATGCCCATGAACGTTGCTGGCCAC
GATGTCATTGCTCAGGCTCAGTCTGGTACCGGAAAGACTGCCACTTTCTC
CATCTCCGCTCTCCAGAAGATTGACCAGGAGCTCAAGGCTTGCCAGGCTC
TGATTGTCGCTCCCACCCGTGAGTTGGCTCAGCAGATCCAGAAGGTCGTT
GTTGCCATTGGTGACTTCATGAACATTGAGTGCCACGCCTGCATTGGTGG
TACCAACGTCCGTGACGACATGAACGCCCTCCGCGCCGGCCCCCAGGTCG
TTGTCGGTACCCCCGGTCGTATCCACGATATGATTGAGCGCCGTGTCCTC
AAGACCGACCAGATGAAGCTCTTCATCCTCGACGAGGCTGATGAGATGCT
TTCTGTGTCTACGCCTACGGTTTTGAGCGTCCCTCCGCTATCCAGCAGCG
TGCCATCAAGCCCATCATTGCCGGACAGATCGAGACTAACTACGATGAGG
TTACCGACTCTTTCGACTCCATGGACCTGAAGCCCGAGCTGCTTCGCGAT
GGCTTCTAACGACAAGGGCTTGGAGGAGATCCCCGAGGACCTCATCTAAC
GTGGTTTCACCGAGCAAATCTACGACATCTTCCAGCTCCTCCCCCAGTCT
ACCCAGGTCACCCTGCTGTCCGCTACCATGCCCCAGGATGTCCTTGAGGT
CACCACCAAGTTCATGCGTGACCCCATCCGTATCCTGGTCAAGAAGCAGG
AGCTTACCCTTGAGGGTATCAAGCAGTTCTACATTGCTGTTGAGAAGGAG
GAGTGGAAGCTCGACACCCTCTCCGATCTCTACGAGACCGTCACCATTAC
CCAGGCCGTCATCTTCTGTAACACCCGCCGCAAGGTCGACTGGCTCACTG
ACAAGCTCACTGCCCGTGACTTCACCGTCTCTGCCATGCACGGTGACATG
GAGCAGGGCCAGCGTGATGTTATCATGAAGGAGTTCCGTTCCGGATCTTC
CCGTGTCCTGATCGCCACTGACCTTCTGGCCCGTGGTATCGATGTCCAGC
AGGTCTCCCTGGTCATCAACTACGACCTTCCCGCCAACCGTGAGAACTAC
ATCCACCGTATCGGTCGTGGTGGTCGTTTCGGTCGTAAGGGTGTTGCCAT
CAACTTCGTCACCGCTGACGATGTCCGCATGATGCGTGAGATTGAGCAGT
TCTACAGCACCCAGATCGAGGAGATGCCCATGAACGTTGCTGGCCACGAT
GTCATTGCTCAGGCTCAGTCTGGTACCGGAAAGACTGCCACTTTCTCCAT
CTCCGCTCTCCAGAAGATTGACCAGGAGCTCAAGGCTTGCCAGGCTCTGA
TTGTCGCTCCCACCCGTGAGTTGGCTCAGCAGATCCAGAAGGTCGTTGTT
GCCATTGGTGACTTCATGAACATTGAGTGCCACGCCTGCATTGGTGGTAC
CAACGTCCGTGACGACATGAACGCCCTCCGCGCCGGCCCCCAGGTCGTTG
TCGGTACCCCCGGTCGTATCCACGATATGATTGAGCGCCGTGTCCTCAAG
ACCGACCAGATGAAGCTCTTCATCCTCGACGAGGCTGATGAGATGCTTTC
TGTGTCTACGCCTACGGTTTTGAGCGTCCCTCCGCTATCCAGCAGCGTGC
CATCAAGCCCATCATTGCCGGACAGATCGAGACTAACTACGATGAGGTTA
CCGACTCTTTCGACTCCATGGACCTGAAGCCCGAGCTGCTTCGCGATGGC
TTCTAACGACAAGGGCTTGGAGGAGATCCCCGAGGACCTCATCTAACGTG
GTTTCACCGAGCAAATCTACGACATCTTCCAGCTCCTCCCCCAGTCTACC
CAGGTCACCCTGCTGTCCGCTACCATGCCCCAGGATGTCCTTGAGGTCAC
CACCAAGTTCATGCGTGACCCCATCCGTATCCTGGTCAAGAAGCAGGAGC
TTACCCTTGAGGGTATCAAGCAGTTCTACATTGCTGTTGAGAAGGAGGAG
TGGAAGCTCGACACCCTCTCCGATCTCTACGAGACCGTCACCATTACCCA
GGCCGTCATCTTCTGTAACACCCGCCGCAAGGTCGACTGGCTCACTGACA
AGCTCACTGCCCGTGACTTCACCGTCTCTGCCATGCACGGTGACATGGAG
CAGGGCCAGCGTGATGTTATCATGAAGGAGTTCCGTTCCGGATCTTCCCG
TGTCCTGATCGCCACTGACCTTCTGGCCCGTGGTATCGATGTCCAGCAGG
TCTCCCTGGTCATCAACTACGACCTTCCCGCCAACCGTGAGAACTACATC
CACCGTATCGGTCGTGGTGGTCGTTTCGGTCGTAAGGGTGTTGCCATCAA
CTTCGTCACCGCTGACGATGTCCGCATGATGCGTGAGATTGAGCAGTTCT
ACAGCACCCAGATCGAGGAGATGCCCATGAACGTTGCTGGCCACGATGTC
ATTGCTCAGGCTCAGTCTGGTACCGGAAAGACTGCCACTTTCTCCATCTC
CGCTCTCCAGAAGATTGACCAGGAGCTCAAGGCTTGCCAGGCTCTGATTG
TCGCTCCCACCCGTGAGTTGGCTCAGCAGATCCAGAAGGTCGTTGTTGCC
ATTGGTGACTTCATGAACATTGAGTGCCACGCCTGCATTGGTGGTACCAA
CGTCCGTGACGACATGAACGCCCTCCGCGCCGGCCCCCAGGTCGTTGTCG
GTACCCCCGGTCGTATCCACGATATGATTGAGCGCCGTGTCCTCAAGACC
GACCAGATGAAGCTCTTCATCCTCGACGAGGCTGATGAGATGCTTTCTGT
GTCTACGCCTACGGTTTTGAGCGTCCCTCCGCTATCCAGCAGCGTGCCAT
CAAGCCCATCATTGCCGGACAGATCGAGACTAACTACGATGAGGTTACCG
ACTCTTTCGACTCCATGGACCTGAAGCCCGAGCTGCTTCGCGATGGCTTC
TAACGACAAGGGCTTGGAGGAGATCCCCGAGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TIF1ASPNIDRAFT_37406Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_37406-T1ASPNIDRAFT_37406-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_37406-T1.cdsASPNIDRAFT_37406-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_37406-T1.exon6ASPNIDRAFT_37406-T1.exon6Aspergillus niger ATCC 1015exon
ASPNIDRAFT_37406-T1.exon5ASPNIDRAFT_37406-T1.exon5Aspergillus niger ATCC 1015exon
ASPNIDRAFT_37406-T1.exon4ASPNIDRAFT_37406-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_37406-T1.exon3ASPNIDRAFT_37406-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_37406-T1.exon2ASPNIDRAFT_37406-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_37406-T1.exon1ASPNIDRAFT_37406-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR014014
DBxrefInterPro:IPR000629
DBxrefInterPro:IPR011545
DBxrefInterPro:IPR001650
DBxrefInterPro:IPR014001
DBxrefPFAM:PF04851
DBxrefPFAM:PF00271
DBxrefPFAM:PF00270
Producttranslation initiation factor eIF4A
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:2987957..2989599 -
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