You are here

Home

ASPNIDRAFT_38072-T1, ASPNIDRAFT_38072-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_38072-T1
Unique NameASPNIDRAFT_38072-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:1987401..1988868-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_38072-T1 ID=ASPNIDRAFT_38072-T1|Name=ASPNIDRAFT_38072-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1468bp|location=Sequence derived from alignment at ACJE01000021.1:1987401..1988868- (Aspergillus niger ATCC 1015)
ATGAGAGATCCATTCGCACTTGCCCTTCTTCTATCAGTTGTTGCATATCA
GCCCTGGGCTTTGTATCTTGCAGAGGTTTGCGAGCAATTGGGGCCACAAC
TGTCAAAGTTGGCTGTTATATCTAGCTGGGATGCAATCGATCATGAGCGC
TGGATCAAGTCCAACGCACCTACGCCCGGCGTTGTGGTCACACCAGCTAC
TGAGCAGGATGTGGCGGCAATTGTAGGTTGCTCTTTTGTTACGGATGCAT
AAGATAACTTGCAACAGCTAATCTTAAATGTACAATAGGTGTCATATTGT
ATTTCAAACAATATCTCATTCCTAGCCCAGAGTGGTGGGCATGGGTGGTC
ACAAACGCTGCATCTGGACGAGGATGGATTGCTCATCTATCTCAAACAGC
TTGATGAAGTCACCTTCAGTAAGAACAGGAGAGATGTGGTTGTTGGAGGC
GGCGCCTCTGTTGCTCAGGTGATTGAGGCTTCATCCAAGAATAACGCTTT
AGTTCAGACAAACAATTGCAACTGTATTGGAGCTCTGGGCGCTCTTCTTG
GGGGCGGATATGGTAGCCTGATGGGCATGGTCGGCCTCGGAATCGACAAT
ATAATATCTCTCAATCTGGTCATGGCTGACGGTTGCCTGCATACAATAAC
CCCGAAAGATATAGATCTCTTCTGGGCTCTTCGCGGTGCTGGCCCTAATT
TTGGCATTGTCACGTCCGCAAAGATGAAATCATACCCGGTTCTAGCTTCT
GGCAAAGCCGCCTGGACGGGGCAACTTGTCTTTTCTGCCGACAAATTGGA
GGCCTTGGTGGAAACAATGGACAGAATAACTTTAGAACCGGAGATGAGCG
TCTTTCTATATTTTATGACCAGTGGTGAACCAGACAATATACCTATGGTT
TCTCTAATGCTATATTACTACGGTACCGAAGACAAAGGGCGAGCTGCATT
CTCATGTTTCTTCGACCTAGGTCCAACTAATGACACCACGATGGCAACTG
AGTACGCTCACTGGACTGATGCGTCCAGCATAGCCTGTTCAAAGAGTGGG
TTCAGAATTCCATACTCTGCCGGACTTAGCCGGATGGTTAGCAGCACTTG
GAAAGAGGCCTGGGAGGAGTATGTTGCTTTCGTTTCCCTGGGTGGCACCG
GTCAAAGTCTGGTCCTCTTGGAGGCGTTTCCACTCGAAAAGACGCGTTTC
TTTGGGCAGGATTCGTCAGCTTACGCCTGGAGAAACAAGGTAAACTTCAA
CGCGATGGCTATAGCGTGGTATTTCGATGATAGCCTTGAATCGGACGCGA
GAAAGTGGGCATCTAAAATGCGTGATTTATGGCGGTCTACTGATGGATTG
GACTCACCAGCAGTGTATGTGCCCCCTCTAGGTATGTTTGCAAAACTAAC
TTCTATGGTTGAATTTAGATACATCAATTTCGCCTTTGATGAGGAACTGT
CAGTCATATATGGTGTAA
back to top

Coding sequence (CDS) from alignment at ACJE01000021.1:1987401..1988868-

>ASPNIDRAFT_38072-T1 ID=ASPNIDRAFT_38072-T1|Name=ASPNIDRAFT_38072-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=4095bp|location=Sequence derived from alignment at ACJE01000021.1:1987401..1988868- (Aspergillus niger ATCC 1015)
ATACATCAATTTCGCCTTTGATGAGGAACTGTCAGTCATATATGGTGTAA
GTGTCATATTGTATTTCAAACAATATCTCATTCCTAGCCCAGAGTGGTGG
GCATGGGTGGTCACAAACGCTGCATCTGGACGAGGATGGATTGCTCATCT
ATCTCAAACAGCTTGATGAAGTCACCTTCAGTAAGAACAGGAGAGATGTG
GTTGTTGGAGGCGGCGCCTCTGTTGCTCAGGTGATTGAGGCTTCATCCAA
GAATAACGCTTTAGTTCAGACAAACAATTGCAACTGTATTGGAGCTCTGG
GCGCTCTTCTTGGGGGCGGATATGGTAGCCTGATGGGCATGGTCGGCCTC
GGAATCGACAATATAATATCTCTCAATCTGGTCATGGCTGACGGTTGCCT
GCATACAATAACCCCGAAAGATATAGATCTCTTCTGGGCTCTTCGCGGTG
CTGGCCCTAATTTTGGCATTGTCACGTCCGCAAAGATGAAATCATACCCG
GTTCTAGCTTCTGGCAAAGCCGCCTGGACGGGGCAACTTGTCTTTTCTGC
CGACAAATTGGAGGCCTTGGTGGAAACAATGGACAGAATAACTTTAGAAC
CGGAGATGAGCGTCTTTCTATATTTTATGACCAGTGGTGAACCAGACAAT
ATACCTATGGTTTCTCTAATGCTATATTACTACGGTACCGAAGACAAAGG
GCGAGCTGCATTCTCATGTTTCTTCGACCTAGGTCCAACTAATGACACCA
CGATGGCAACTGAGTACGCTCACTGGACTGATGCGTCCAGCATAGCCTGT
TCAAAGAGTGGGTTCAGAATTCCATACTCTGCCGGACTTAGCCGGATGGT
TAGCAGCACTTGGAAAGAGGCCTGGGAGGAGTATGTTGCTTTCGTTTCCC
TGGGTGGCACCGGTCAAAGTCTGGTCCTCTTGGAGGCGTTTCCACTCGAA
AAGACGCGTTTCTTTGGGCAGGATTCGTCAGCTTACGCCTGGAGAAACAA
GGTAAACTTCAACGCGATGGCTATAGCGTGGTATTTCGATGATAGCCTTG
AATCGGACGCGAGAAAGTGGGCATCTAAAATGCGTGATTTATGGCGGTCT
ACTGATGGATTGGACTCACCAGCAGTGTATGTGCCCCCTCTAGATGAGAG
ATCCATTCGCACTTGCCCTTCTTCTATCAGTTGTTGCATATCAGCCCTGG
GCTTTGTATCTTGCAGAGGTTTGCGAGCAATTGGGGCCACAACTGTCAAA
GTTGGCTGTTATATCTAGCTGGGATGCAATCGATCATGAGCGCTGGATCA
AGTCCAACGCACCTACGCCCGGCGTTGTGGTCACACCAGCTACTGAGCAG
GATGTGGCGGCAATTATACATCAATTTCGCCTTTGATGAGGAACTGTCAG
TCATATATGGTGTAAGTGTCATATTGTATTTCAAACAATATCTCATTCCT
AGCCCAGAGTGGTGGGCATGGGTGGTCACAAACGCTGCATCTGGACGAGG
ATGGATTGCTCATCTATCTCAAACAGCTTGATGAAGTCACCTTCAGTAAG
AACAGGAGAGATGTGGTTGTTGGAGGCGGCGCCTCTGTTGCTCAGGTGAT
TGAGGCTTCATCCAAGAATAACGCTTTAGTTCAGACAAACAATTGCAACT
GTATTGGAGCTCTGGGCGCTCTTCTTGGGGGCGGATATGGTAGCCTGATG
GGCATGGTCGGCCTCGGAATCGACAATATAATATCTCTCAATCTGGTCAT
GGCTGACGGTTGCCTGCATACAATAACCCCGAAAGATATAGATCTCTTCT
GGGCTCTTCGCGGTGCTGGCCCTAATTTTGGCATTGTCACGTCCGCAAAG
ATGAAATCATACCCGGTTCTAGCTTCTGGCAAAGCCGCCTGGACGGGGCA
ACTTGTCTTTTCTGCCGACAAATTGGAGGCCTTGGTGGAAACAATGGACA
GAATAACTTTAGAACCGGAGATGAGCGTCTTTCTATATTTTATGACCAGT
GGTGAACCAGACAATATACCTATGGTTTCTCTAATGCTATATTACTACGG
TACCGAAGACAAAGGGCGAGCTGCATTCTCATGTTTCTTCGACCTAGGTC
CAACTAATGACACCACGATGGCAACTGAGTACGCTCACTGGACTGATGCG
TCCAGCATAGCCTGTTCAAAGAGTGGGTTCAGAATTCCATACTCTGCCGG
ACTTAGCCGGATGGTTAGCAGCACTTGGAAAGAGGCCTGGGAGGAGTATG
TTGCTTTCGTTTCCCTGGGTGGCACCGGTCAAAGTCTGGTCCTCTTGGAG
GCGTTTCCACTCGAAAAGACGCGTTTCTTTGGGCAGGATTCGTCAGCTTA
CGCCTGGAGAAACAAGGTAAACTTCAACGCGATGGCTATAGCGTGGTATT
TCGATGATAGCCTTGAATCGGACGCGAGAAAGTGGGCATCTAAAATGCGT
GATTTATGGCGGTCTACTGATGGATTGGACTCACCAGCAGTGTATGTGCC
CCCTCTAGATGAGAGATCCATTCGCACTTGCCCTTCTTCTATCAGTTGTT
GCATATCAGCCCTGGGCTTTGTATCTTGCAGAGGTTTGCGAGCAATTGGG
GCCACAACTGTCAAAGTTGGCTGTTATATCTAGCTGGGATGCAATCGATC
ATGAGCGCTGGATCAAGTCCAACGCACCTACGCCCGGCGTTGTGGTCACA
CCAGCTACTGAGCAGGATGTGGCGGCAATTATACATCAATTTCGCCTTTG
ATGAGGAACTGTCAGTCATATATGGTGTAAGTGTCATATTGTATTTCAAA
CAATATCTCATTCCTAGCCCAGAGTGGTGGGCATGGGTGGTCACAAACGC
TGCATCTGGACGAGGATGGATTGCTCATCTATCTCAAACAGCTTGATGAA
GTCACCTTCAGTAAGAACAGGAGAGATGTGGTTGTTGGAGGCGGCGCCTC
TGTTGCTCAGGTGATTGAGGCTTCATCCAAGAATAACGCTTTAGTTCAGA
CAAACAATTGCAACTGTATTGGAGCTCTGGGCGCTCTTCTTGGGGGCGGA
TATGGTAGCCTGATGGGCATGGTCGGCCTCGGAATCGACAATATAATATC
TCTCAATCTGGTCATGGCTGACGGTTGCCTGCATACAATAACCCCGAAAG
ATATAGATCTCTTCTGGGCTCTTCGCGGTGCTGGCCCTAATTTTGGCATT
GTCACGTCCGCAAAGATGAAATCATACCCGGTTCTAGCTTCTGGCAAAGC
CGCCTGGACGGGGCAACTTGTCTTTTCTGCCGACAAATTGGAGGCCTTGG
TGGAAACAATGGACAGAATAACTTTAGAACCGGAGATGAGCGTCTTTCTA
TATTTTATGACCAGTGGTGAACCAGACAATATACCTATGGTTTCTCTAAT
GCTATATTACTACGGTACCGAAGACAAAGGGCGAGCTGCATTCTCATGTT
TCTTCGACCTAGGTCCAACTAATGACACCACGATGGCAACTGAGTACGCT
CACTGGACTGATGCGTCCAGCATAGCCTGTTCAAAGAGTGGGTTCAGAAT
TCCATACTCTGCCGGACTTAGCCGGATGGTTAGCAGCACTTGGAAAGAGG
CCTGGGAGGAGTATGTTGCTTTCGTTTCCCTGGGTGGCACCGGTCAAAGT
CTGGTCCTCTTGGAGGCGTTTCCACTCGAAAAGACGCGTTTCTTTGGGCA
GGATTCGTCAGCTTACGCCTGGAGAAACAAGGTAAACTTCAACGCGATGG
CTATAGCGTGGTATTTCGATGATAGCCTTGAATCGGACGCGAGAAAGTGG
GCATCTAAAATGCGTGATTTATGGCGGTCTACTGATGGATTGGACTCACC
AGCAGTGTATGTGCCCCCTCTAGATGAGAGATCCATTCGCACTTGCCCTT
CTTCTATCAGTTGTTGCATATCAGCCCTGGGCTTTGTATCTTGCAGAGGT
TTGCGAGCAATTGGGGCCACAACTGTCAAAGTTGGCTGTTATATCTAGCT
GGGATGCAATCGATCATGAGCGCTGGATCAAGTCCAACGCACCTACGCCC
GGCGTTGTGGTCACACCAGCTACTGAGCAGGATGTGGCGGCAATT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0071949FAD binding
GO:0050660flavin adenine dinucleotide binding
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_38072ASPNIDRAFT_38072Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_38072-T1ASPNIDRAFT_38072-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_38072-T1.cdsASPNIDRAFT_38072-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_38072-T1.exon3ASPNIDRAFT_38072-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_38072-T1.exon2ASPNIDRAFT_38072-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_38072-T1.exon1ASPNIDRAFT_38072-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-24)
NoteCAZy:AA7
DBxrefInterPro:IPR036318
DBxrefInterPro:IPR016166
DBxrefInterPro:IPR016167
DBxrefInterPro:IPR016169
DBxrefInterPro:IPR006094
DBxrefPFAM:PF01565
ProductFAD/FMN-containing dehydrogenase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:1987401..1988868 -
Powered by Drupal