You are here

Home

ASPNIDRAFT_38519-T1, ASPNIDRAFT_38519-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_38519-T1
Unique NameASPNIDRAFT_38519-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:471388..472233-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_38519-T1 ID=ASPNIDRAFT_38519-T1|Name=ASPNIDRAFT_38519-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=846bp|location=Sequence derived from alignment at ACJE01000021.1:471388..472233- (Aspergillus niger ATCC 1015)
ATGGCGAGCTGCAAAGCAAGTTTTGTGTCGATCTTGAACAACGACGACAA
CCCGGCCTTCACAGTCCGCTCAGCCCCCGGGCTATCTAAAAATCAAGCCA
CTTCGCCATATCCTTACCACTACGCACCCCAACAGTCGATCCCGGCTCCA
GAGTTCCGCTACCATCATGCATATGTGAATTCTCCCTCAGTATCACCTGG
CCTGGCACGGCTCCCATTCGACCCCGTGCCCGAACCCGTGCAGCCCACCT
CTCCCGGCTCCTCGGACTGCTCCTACGACTACATGAGCAGCACCAGTGTT
CGATCCCACTATCACCTTGGCCGCCAGGATACGAATGCCTATCGCCCGCT
CTCTGAAAAGCGCATCAGCGGCAGCTCTGTTACTGAGCCTCCATCGCCCC
AGCCTTCTGTCGGCAGTAACAAGGAATCTATGGCTGCCAAATCCGGAGTC
CGGAAGAACAAGTACCCTTGTCCTTTTGCTGCCAGCCACGGCTGCTCTGC
GACGTTTACGACATCCGGCCACGCCGCCCGCCACGGAAAGAAGCACACAG
GGGAGAAGAGCGTCCACTGCCCCATCTGCAACAAGGCATTCACCCGGAAA
GACAACATGAAGCAGCACATTCGCACGCACCGCACCCATTCCGAGGATAT
GCCTACGGCCATGACGACGGATCGGGATAGCGATGGCAGCAGTAGCTGGT
CGACCCGGAGGAGCAACACATCGGCGTATGACCACCAGCGCTCCGTCAGC
GGGACACAGATGGACGGGCCCTCGTATGATAGTGGTTCAACCCTGAACCC
GATCTCCACAAGTCGGGCGTATGAGCCGATGTCCTCACGAGTATGA
back to top

Coding sequence (CDS) from alignment at ACJE01000021.1:471388..472233-

>ASPNIDRAFT_38519-T1 ID=ASPNIDRAFT_38519-T1|Name=ASPNIDRAFT_38519-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=846bp|location=Sequence derived from alignment at ACJE01000021.1:471388..472233- (Aspergillus niger ATCC 1015)
ATGGCGAGCTGCAAAGCAAGTTTTGTGTCGATCTTGAACAACGACGACAA
CCCGGCCTTCACAGTCCGCTCAGCCCCCGGGCTATCTAAAAATCAAGCCA
CTTCGCCATATCCTTACCACTACGCACCCCAACAGTCGATCCCGGCTCCA
GAGTTCCGCTACCATCATGCATATGTGAATTCTCCCTCAGTATCACCTGG
CCTGGCACGGCTCCCATTCGACCCCGTGCCCGAACCCGTGCAGCCCACCT
CTCCCGGCTCCTCGGACTGCTCCTACGACTACATGAGCAGCACCAGTGTT
CGATCCCACTATCACCTTGGCCGCCAGGATACGAATGCCTATCGCCCGCT
CTCTGAAAAGCGCATCAGCGGCAGCTCTGTTACTGAGCCTCCATCGCCCC
AGCCTTCTGTCGGCAGTAACAAGGAATCTATGGCTGCCAAATCCGGAGTC
CGGAAGAACAAGTACCCTTGTCCTTTTGCTGCCAGCCACGGCTGCTCTGC
GACGTTTACGACATCCGGCCACGCCGCCCGCCACGGAAAGAAGCACACAG
GGGAGAAGAGCGTCCACTGCCCCATCTGCAACAAGGCATTCACCCGGAAA
GACAACATGAAGCAGCACATTCGCACGCACCGCACCCATTCCGAGGATAT
GCCTACGGCCATGACGACGGATCGGGATAGCGATGGCAGCAGTAGCTGGT
CGACCCGGAGGAGCAACACATCGGCGTATGACCACCAGCGCTCCGTCAGC
GGGACACAGATGGACGGGCCCTCGTATGATAGTGGTTCAACCCTGAACCC
GATCTCCACAAGTCGGGCGTATGAGCCGATGTCCTCACGAGTATGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_38519ASPNIDRAFT_38519Aspergillus niger ATCC 1015gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_38519-T1.cdsASPNIDRAFT_38519-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_38519-T1.exon1ASPNIDRAFT_38519-T1.exon1Aspergillus niger ATCC 1015exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_38519-T1ASPNIDRAFT_38519-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR013087
DBxrefPFAM:PF00096
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:471388..472233 -
Powered by Drupal