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ASPNIDRAFT_40316-T1, ASPNIDRAFT_40316-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_40316-T1
Unique NameASPNIDRAFT_40316-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000008.1:91632..92937+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_40316-T1 ID=ASPNIDRAFT_40316-T1|Name=ASPNIDRAFT_40316-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1306bp|location=Sequence derived from alignment at ACJE01000008.1:91632..92937+ (Aspergillus niger ATCC 1015)
ATGGTTCAAGCCGAATCCTCAGCCAGTGCCTCTCGTAATGGCCTCAAGGC
GCATACGGCCGGCGCCCCTCCTGACTATGAACTGCCCTGGTACGTACAGC
AGGTCCCAGCACTAAAGCCAGCTTAGGATGTCGAGTCTGATTGCCAAATT
TAAACAATAGGGTAGAGAAATATCGCCCGGTATATCTCGATGATATTGTT
GGAAACACAGAAACAGTTGAGCGCTTGAAGATCATCGCTAAGGATGGAAA
CATGCCGCACGTTATCATCTCGGGCATGCCCGGTATTGGAAAGACTACTT
CGATCTTGTGCTTGGCGAGACAGCTACTGGGAGACGCATATAAGGAGGCG
GTTCTGGAGCTCAATGCTAGTGATGAAAGAGGTACATCTACCCCACTTGG
AGAGGGAGACGAGAGACGGCTTTAATCTAATATGCTCCAGGTATCGACGT
GGTACGGAACCGGATCAAAGGCTTTGCGCAGAAGAAGGTCACTTTGCCGC
CTGGTCGTCATAAGCTTGTCATCCTTGATGAGGCAGATAGGTACGTACTA
GACAGTGAGCTACATTACCTTTCCTGGATGCTCACGGTGGTATAGTATGA
CATCAGGTGCCCAGCAAGCTTTGCGGCGTACAATGGAGATTTACTCGTCG
ACTACACGGTTCGCGTTCGCCTGTAATCAGTCAAATAAAATCATCGAGCC
GATTCAGTCGCGATGCGCTATCCTACGTTATGCTCGGTTGACCGATGCGC
AAATTGTCAAGCGTCTGAAACAAGTATGCGATGCTGAGAAAGTGGAACAT
AACGAAGAGGGCATTGCCGCCCTGGTATTCAGTGCTGAGGGAGATATGCG
TCAGGCTATCAACAACTTGCAGAGTACATGGTCGGGTTTCGGTTTCGTCA
GTGGGGACAACGTCTTCAGGGTGGTCGACAGCCCGCACCCGATCAAGGTC
CAGGCAATGATCAAGGCCTGCTGGGAAGGCAAGGTTGATGCGGCGTTGGA
GACACTGAATGAATTGTGGTATGTACACAGTGCAGTCTGCCAATTTTATG
TTTGTGGACTCGTCCTGACCGTATTTCTAGGGAATTGGGGTATTCCTCCC
ATGATATCATCAGTACCATGTTCCGTGTCACCAAGACAATTCCCACTCTG
TCAGAACATTCGAAGTTGGAATTCATCCGGGAGATTGGTTTTACGCACAT
GCGCATTCTAGACGGCGTGCAGTCACTGCTGCAGCTTAGCGGCTGCGTTG
CGAAGCTTTGCAGGATCAACATGAAGCCGCAGCTCTTTGAGCCGCCGAAG
AATTGA
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Coding sequence (CDS) from alignment at ACJE01000008.1:91632..92937+

>ASPNIDRAFT_40316-T1 ID=ASPNIDRAFT_40316-T1|Name=ASPNIDRAFT_40316-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=5145bp|location=Sequence derived from alignment at ACJE01000008.1:91632..92937+ (Aspergillus niger ATCC 1015)
ATGGTTCAAGCCGAATCCTCAGCCAGTGCCTCTCGTAATGGCCTCAAGGC
GCATACGGCCGGCGCCCCTCCTGACTATGAACTGCCCTGGGTAGAGAAAT
ATCGCCCGGTATATCTCGATGATATTGTTGGAAACACAGAAACAGTTGAG
CGCTTGAAGATCATCGCTAAGGATGGAAACATGCCGCACGTTATCATCTC
GGGCATGCCCGGTATTGGAAAGACTACTTCGATCTTGTGCTTGGCGAGAC
AGCTACTGGGAGACGCATATAAGGAGGCGGTTCTGGAGCTCAATGCTAGT
GATGAAAGAGGCTTTGCGCAGAAGAAGGTCACTTTGCCGCCTGGTCGTCA
TAAGCTTGTCATCCTTGATGAGGCAGATAGTATGACATCAGGTGCCCAGC
AAGCTTTGCGGCGTACAATGGAGATTTACTCGTCGACTACACGGTTCGCG
TTCGCCTGTAATCAGTCAAATAAAATCATCGAGCCGATTCAGTCGCGATG
CGCTATCCTACGTTATGCTCGGTTGACCGATGCGCAAATTGTCAAGCGTC
TGAAACAAGTATGCGATGCTGAGAAAGTGGAACATAACGAAGAGGGCATT
GCCGCCCTGGTATTCAGTGCTGAGGGAGATATGCGTCAGGCTATCAACAA
CTTGCAGAGTACATGGTCGGGTTTCGGTTTCGTCAGTGGGGACAACGTCT
TCAGGGTGGTCGACAGCCCGCACCCGATCAAGGTCCAGGCAATGATCAAG
GCCTGCTGGGAAGGCAAGGTTGATGCGGCGTTGGAGACACTGAATGAATT
GTGGGAATTGGGGTATTCCTCCCATGATATCATCAGTACCATGTTCCGTG
TCACCAAGACAATTCCCACTCTGTCAGAACATTCGAAGTTGGAATTCATC
CGGGAGATTGGTTTTACGCACATGCGCATTCTAGACGGCGTGCAGTCACT
GCTGCAGCTTAGCGGCTGCGTTGCGAAGCTTTGCAGGATCAACATGAAGC
CGCAGCTCTTTGAGCCGCCGAAGAATTGAATGGTTCAAGCCGAATCCTCA
GCCAGTGCCTCTCGTAATGGCCTCAAGGCGCATACGGCCGGCGCCCCTCC
TGACTATGAACTGCCCTGGGTAGAGAAATATCGCCCGGTATATCTCGATG
ATATTGTTGGAAACACAGAAACAGTTGAGCGCTTGAAGATCATCGCTAAG
GATGGAAACATGCCGCACGTTATCATCTCGGGCATGCCCGGTATTGGAAA
GACTACTTCGATCTTGTGCTTGGCGAGACAGCTACTGGGAGACGCATATA
AGGAGGCGGTTCTGGAGCTCAATGCTAGTGATGAAAGAGGCTTTGCGCAG
AAGAAGGTCACTTTGCCGCCTGGTCGTCATAAGCTTGTCATCCTTGATGA
GGCAGATAGTATGACATCAGGTGCCCAGCAAGCTTTGCGGCGTACAATGG
AGATTTACTCGTCGACTACACGGTTCGCGTTCGCCTGTAATCAGTCAAAT
AAAATCATCGAGCCGATTCAGTCGCGATGCGCTATCCTACGTTATGCTCG
GTTGACCGATGCGCAAATTGTCAAGCGTCTGAAACAAGTATGCGATGCTG
AGAAAGTGGAACATAACGAAGAGGGCATTGCCGCCCTGGTATTCAGTGCT
GAGGGAGATATGCGTCAGGCTATCAACAACTTGCAGAGTACATGGTCGGG
TTTCGGTTTCGTCAGTGGGGACAACGTCTTCAGGGTGGTCGACAGCCCGC
ACCCGATCAAGGTCCAGGCAATGATCAAGGCCTGCTGGGAAGGCAAGGTT
GATGCGGCGTTGGAGACACTGAATGAATTGTGGGAATTGGGGTATTCCTC
CCATGATATCATCAGTACCATGTTCCGTGTCACCAAGACAATTCCCACTC
TGTCAGAACATTCGAAGTTGGAATTCATCCGGGAGATTGGTTTTACGCAC
ATGCGCATTCTAGACGGCGTGCAGTCACTGCTGCAGCTTAGCGGCTGCGT
TGCGAAGCTTTGCAGGATCAACATGAAGCCGCAGCTCTTTGAGCCGCCGA
AGAATTGAATGGTTCAAGCCGAATCCTCAGCCAGTGCCTCTCGTAATGGC
CTCAAGGCGCATACGGCCGGCGCCCCTCCTGACTATGAACTGCCCTGGGT
AGAGAAATATCGCCCGGTATATCTCGATGATATTGTTGGAAACACAGAAA
CAGTTGAGCGCTTGAAGATCATCGCTAAGGATGGAAACATGCCGCACGTT
ATCATCTCGGGCATGCCCGGTATTGGAAAGACTACTTCGATCTTGTGCTT
GGCGAGACAGCTACTGGGAGACGCATATAAGGAGGCGGTTCTGGAGCTCA
ATGCTAGTGATGAAAGAGGCTTTGCGCAGAAGAAGGTCACTTTGCCGCCT
GGTCGTCATAAGCTTGTCATCCTTGATGAGGCAGATAGTATGACATCAGG
TGCCCAGCAAGCTTTGCGGCGTACAATGGAGATTTACTCGTCGACTACAC
GGTTCGCGTTCGCCTGTAATCAGTCAAATAAAATCATCGAGCCGATTCAG
TCGCGATGCGCTATCCTACGTTATGCTCGGTTGACCGATGCGCAAATTGT
CAAGCGTCTGAAACAAGTATGCGATGCTGAGAAAGTGGAACATAACGAAG
AGGGCATTGCCGCCCTGGTATTCAGTGCTGAGGGAGATATGCGTCAGGCT
ATCAACAACTTGCAGAGTACATGGTCGGGTTTCGGTTTCGTCAGTGGGGA
CAACGTCTTCAGGGTGGTCGACAGCCCGCACCCGATCAAGGTCCAGGCAA
TGATCAAGGCCTGCTGGGAAGGCAAGGTTGATGCGGCGTTGGAGACACTG
AATGAATTGTGGGAATTGGGGTATTCCTCCCATGATATCATCAGTACCAT
GTTCCGTGTCACCAAGACAATTCCCACTCTGTCAGAACATTCGAAGTTGG
AATTCATCCGGGAGATTGGTTTTACGCACATGCGCATTCTAGACGGCGTG
CAGTCACTGCTGCAGCTTAGCGGCTGCGTTGCGAAGCTTTGCAGGATCAA
CATGAAGCCGCAGCTCTTTGAGCCGCCGAAGAATTGAATGGTTCAAGCCG
AATCCTCAGCCAGTGCCTCTCGTAATGGCCTCAAGGCGCATACGGCCGGC
GCCCCTCCTGACTATGAACTGCCCTGGGTAGAGAAATATCGCCCGGTATA
TCTCGATGATATTGTTGGAAACACAGAAACAGTTGAGCGCTTGAAGATCA
TCGCTAAGGATGGAAACATGCCGCACGTTATCATCTCGGGCATGCCCGGT
ATTGGAAAGACTACTTCGATCTTGTGCTTGGCGAGACAGCTACTGGGAGA
CGCATATAAGGAGGCGGTTCTGGAGCTCAATGCTAGTGATGAAAGAGGCT
TTGCGCAGAAGAAGGTCACTTTGCCGCCTGGTCGTCATAAGCTTGTCATC
CTTGATGAGGCAGATAGTATGACATCAGGTGCCCAGCAAGCTTTGCGGCG
TACAATGGAGATTTACTCGTCGACTACACGGTTCGCGTTCGCCTGTAATC
AGTCAAATAAAATCATCGAGCCGATTCAGTCGCGATGCGCTATCCTACGT
TATGCTCGGTTGACCGATGCGCAAATTGTCAAGCGTCTGAAACAAGTATG
CGATGCTGAGAAAGTGGAACATAACGAAGAGGGCATTGCCGCCCTGGTAT
TCAGTGCTGAGGGAGATATGCGTCAGGCTATCAACAACTTGCAGAGTACA
TGGTCGGGTTTCGGTTTCGTCAGTGGGGACAACGTCTTCAGGGTGGTCGA
CAGCCCGCACCCGATCAAGGTCCAGGCAATGATCAAGGCCTGCTGGGAAG
GCAAGGTTGATGCGGCGTTGGAGACACTGAATGAATTGTGGGAATTGGGG
TATTCCTCCCATGATATCATCAGTACCATGTTCCGTGTCACCAAGACAAT
TCCCACTCTGTCAGAACATTCGAAGTTGGAATTCATCCGGGAGATTGGTT
TTACGCACATGCGCATTCTAGACGGCGTGCAGTCACTGCTGCAGCTTAGC
GGCTGCGTTGCGAAGCTTTGCAGGATCAACATGAAGCCGCAGCTCTTTGA
GCCGCCGAAGAATTGAATGGTTCAAGCCGAATCCTCAGCCAGTGCCTCTC
GTAATGGCCTCAAGGCGCATACGGCCGGCGCCCCTCCTGACTATGAACTG
CCCTGGGTAGAGAAATATCGCCCGGTATATCTCGATGATATTGTTGGAAA
CACAGAAACAGTTGAGCGCTTGAAGATCATCGCTAAGGATGGAAACATGC
CGCACGTTATCATCTCGGGCATGCCCGGTATTGGAAAGACTACTTCGATC
TTGTGCTTGGCGAGACAGCTACTGGGAGACGCATATAAGGAGGCGGTTCT
GGAGCTCAATGCTAGTGATGAAAGAGGCTTTGCGCAGAAGAAGGTCACTT
TGCCGCCTGGTCGTCATAAGCTTGTCATCCTTGATGAGGCAGATAGTATG
ACATCAGGTGCCCAGCAAGCTTTGCGGCGTACAATGGAGATTTACTCGTC
GACTACACGGTTCGCGTTCGCCTGTAATCAGTCAAATAAAATCATCGAGC
CGATTCAGTCGCGATGCGCTATCCTACGTTATGCTCGGTTGACCGATGCG
CAAATTGTCAAGCGTCTGAAACAAGTATGCGATGCTGAGAAAGTGGAACA
TAACGAAGAGGGCATTGCCGCCCTGGTATTCAGTGCTGAGGGAGATATGC
GTCAGGCTATCAACAACTTGCAGAGTACATGGTCGGGTTTCGGTTTCGTC
AGTGGGGACAACGTCTTCAGGGTGGTCGACAGCCCGCACCCGATCAAGGT
CCAGGCAATGATCAAGGCCTGCTGGGAAGGCAAGGTTGATGCGGCGTTGG
AGACACTGAATGAATTGTGGGAATTGGGGTATTCCTCCCATGATATCATC
AGTACCATGTTCCGTGTCACCAAGACAATTCCCACTCTGTCAGAACATTC
GAAGTTGGAATTCATCCGGGAGATTGGTTTTACGCACATGCGCATTCTAG
ACGGCGTGCAGTCACTGCTGCAGCTTAGCGGCTGCGTTGCGAAGCTTTGC
AGGATCAACATGAAGCCGCAGCTCTTTGAGCCGCCGAAGAATTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RFC4ASPNIDRAFT_40316Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_40316-T1ASPNIDRAFT_40316-T1-proteinAspergillus niger ATCC 1015polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_40316-T1.exon1ASPNIDRAFT_40316-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_40316-T1.exon2ASPNIDRAFT_40316-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_40316-T1.exon3ASPNIDRAFT_40316-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_40316-T1.exon4ASPNIDRAFT_40316-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_40316-T1.exon5ASPNIDRAFT_40316-T1.exon5Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_40316-T1.cdsASPNIDRAFT_40316-T1.cdsAspergillus niger ATCC 1015CDS


Properties
Property NameValue
DBxrefInterPro:IPR008921
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR013748
DBxrefInterPro:IPR003959
DBxrefInterPro:IPR003593
DBxrefPFAM:PF08542
DBxrefPFAM:PF00004
Productreplication factor C subunit 4
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000008.1supercontigACJE01000008.1:91632..92937 +
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