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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000008.1:225146..226283- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_40358-T1 ID=ASPNIDRAFT_40358-T1|Name=ASPNIDRAFT_40358-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1138bp|location=Sequence derived from alignment at ACJE01000008.1:225146..226283- (Aspergillus niger ATCC 1015)
ATGGCTATCTCAGACCTACTGAATCGCCGTGTGCGAGCTGTCGCTCAGGA
CGACGAGGAGCTTTACTCTGACCAGTCTGGCTCGGATCAGGCGAGCGACG
ATCTCCGCTCTGACGAGTCAGGCTCAGAAAGTGGCAGTGATGGTTCCCTA
GACGAAGACGACGACGACGATGTGGTTAGTTTCCCCTCGTTTGGATAGAC
ATTGCAACATGCTGACTATCTCACAGTCTCAAGGCGACCCGGAAGATATG
GATGATGACGACGATGACGACGATGACGACGACGAAGATGACGAAGACGA
CAATGATGATGCCCAGGACGACGTTCAAGCCTCACTAAGCAGTATCTCGT
TCGGCGCATTGGCGAAAGCGCAAGCATCTATAGGACCCAAATCAAAGCGG
TCGTCCAAGGCCTCCCGGACAGAAGACGAGCCTGCCGCTCCTTCCCCCTT
AGACGACATTCGGGCGCGGATTCAAGAGGCACGCGAACAGAAACGCCAAG
CGCTGGCGAAAAATAAGGATTCGGAAAAGCTCTCTCGTTCCTCCAAGCAT
GCGCCGGCCGTACAATCCTCCAAACATGCCGTCTCCCGCAAACGGACCAT
CATTGAGCCGCCAAGTGTACCCAAGTCGCGAGACCCCCGTTTTGACCCGA
CTGTCCTGAGCCAGGGTGGTCGCGGAAACCCTCAAGGAACGAGCAACGCT
TACGCATTCTTGGACGAGTATCGCCGGGACGAACTGAAGCAGTTGAAGGA
ACAATACGCCAAGACGAAGAACCAAGAACAGAAAGAAGCTCTGAAGCGTA
CGATTCGGTCGACTCAAGACCGTCTTCGAGCGATGGAGAATAGGAAACGC
GAGAAGGAGATCTTAGCGGAGCATAAGAAGAAGGAGAAACAGCTCATCCG
CGAAGGAAAGAAGAGCAACCCGTACTTCTTGAAGAAGTCGGACCTGAAGA
AGCAGGTGCTGCTCAAGAAGTACGAGAATATGAACTCCAAGGACCGCACC
AAGGCACTCGAGAGGAAGCGCAAGAAGACTGCCGCCAAGGAAAGAAAGGA
GATGCCCATGGAGCGGAGAGCCTTGGCTGGCGACGATGCGCCGAGTGGCG
GTGGAGGTGGCGGCTGGAAACGCCGCAGAGTTGCATAG back to topCoding sequence (CDS) from alignment at ACJE01000008.1:225146..226283- >ASPNIDRAFT_40358-T1 ID=ASPNIDRAFT_40358-T1|Name=ASPNIDRAFT_40358-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2070bp|location=Sequence derived from alignment at ACJE01000008.1:225146..226283- (Aspergillus niger ATCC 1015)
GCGACCCGGAAGATATGGATGATGACGACGATGACGACGATGACGACGAC
GAAGATGACGAAGACGACAATGATGATGCCCAGGACGACGTTCAAGCCTC
ACTAAGCAGTATCTCGTTCGGCGCATTGGCGAAAGCGCAAGCATCTATAG
GACCCAAATCAAAGCGGTCGTCCAAGGCCTCCCGGACAGAAGACGAGCCT
GCCGCTCCTTCCCCCTTAGACGACATTCGGGCGCGGATTCAAGAGGCACG
CGAACAGAAACGCCAAGCGCTGGCGAAAAATAAGGATTCGGAAAAGCTCT
CTCGTTCCTCCAAGCATGCGCCGGCCGTACAATCCTCCAAACATGCCGTC
TCCCGCAAACGGACCATCATTGAGCCGCCAAGTGTACCCAAGTCGCGAGA
CCCCCGTTTTGACCCGACTGTCCTGAGCCAGGGTGGTCGCGGAAACCCTC
AAGGAACGAGCAACGCTTACGCATTCTTGGACGAGTATCGCCGGGACGAA
CTGAAGCAGTTGAAGGAACAATACGCCAAGACGAAGAACCAAGAACAGAA
AGAAGCTCTGAAGCGTACGATTCGGTCGACTCAAGACCGTCTTCGAGCGA
TGGAGAATAGGAAACGCGAGAAGGAGATCTTAGCGGAGCATAAGAAGAAG
GAGAAACAGCTCATCCGCGAAGGAAAGAAGAGCAACCCGTACTTCTTGAA
GAAGTCGGACCTGAAGAAGCAGGTGCTGCTCAAGAAGTACGAGAATATGA
ACTCCAAGGACCGCACCAAGGCACTCGAGAGGAAGCGCAAGAAGACTGCC
GCCAAGGAAAGAAAGGAGATGCCCATGGAGCGGAGAGCCTTGGCTGGCGA
CGATGCGCCGAGTGGCGGTGGAGGTGGCGGCTGGAAACGCCGCAGAGTTG
CATAGATGGCTATCTCAGACCTACTGAATCGCCGTGTGCGAGCTGTCGCT
CAGGACGACGAGGAGCTTTACTCTGACCAGTCTGGCTCGGATCAGGCGAG
CGACGATCTCCGCTCTGACGAGTCAGGCTCAGAAAGCGACCCGGAAGATA
TGGATGATGACGACGATGACGACGATGACGACGACGAAGATGACGAAGAC
GACAATGATGATGCCCAGGACGACGTTCAAGCCTCACTAAGCAGTATCTC
GTTCGGCGCATTGGCGAAAGCGCAAGCATCTATAGGACCCAAATCAAAGC
GGTCGTCCAAGGCCTCCCGGACAGAAGACGAGCCTGCCGCTCCTTCCCCC
TTAGACGACATTCGGGCGCGGATTCAAGAGGCACGCGAACAGAAACGCCA
AGCGCTGGCGAAAAATAAGGATTCGGAAAAGCTCTCTCGTTCCTCCAAGC
ATGCGCCGGCCGTACAATCCTCCAAACATGCCGTCTCCCGCAAACGGACC
ATCATTGAGCCGCCAAGTGTACCCAAGTCGCGAGACCCCCGTTTTGACCC
GACTGTCCTGAGCCAGGGTGGTCGCGGAAACCCTCAAGGAACGAGCAACG
CTTACGCATTCTTGGACGAGTATCGCCGGGACGAACTGAAGCAGTTGAAG
GAACAATACGCCAAGACGAAGAACCAAGAACAGAAAGAAGCTCTGAAGCG
TACGATTCGGTCGACTCAAGACCGTCTTCGAGCGATGGAGAATAGGAAAC
GCGAGAAGGAGATCTTAGCGGAGCATAAGAAGAAGGAGAAACAGCTCATC
CGCGAAGGAAAGAAGAGCAACCCGTACTTCTTGAAGAAGTCGGACCTGAA
GAAGCAGGTGCTGCTCAAGAAGTACGAGAATATGAACTCCAAGGACCGCA
CCAAGGCACTCGAGAGGAAGCGCAAGAAGACTGCCGCCAAGGAAAGAAAG
GAGATGCCCATGGAGCGGAGAGCCTTGGCTGGCGACGATGCGCCGAGTGG
CGGTGGAGGTGGCGGCTGGAAACGCCGCAGAGTTGCATAGATGGCTATCT
CAGACCTACTGAATCGCCGTGTGCGAGCTGTCGCTCAGGACGACGAGGAG
CTTTACTCTGACCAGTCTGGCTCGGATCAGGCGAGCGACGATCTCCGCTC
TGACGAGTCAGGCTCAGAAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0000469 | cleavage involved in rRNA processing |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265M98 |
| DBxref | InterPro:IPR009292 |
| DBxref | PFAM:PF06102 |
| Product | rRNA bioproteinsis protein rrp36 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000008.1 | supercontig | ACJE01000008.1:225146..226283 - |
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