You are here

Home

ASPNIDRAFT_40419-T1, ASPNIDRAFT_40419-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_40419-T1
Unique NameASPNIDRAFT_40419-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000008.1:419069..419932+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_40419-T1 ID=ASPNIDRAFT_40419-T1|Name=ASPNIDRAFT_40419-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=864bp|location=Sequence derived from alignment at ACJE01000008.1:419069..419932+ (Aspergillus niger ATCC 1015)
ATGGCTGATATACCATTGGCATCCTTGTCTTTGACTCATGTCCACTACGT
AAGTCTTTGCCAATGCTCCTGAATAGTCAAAGTAGCCCGGATCTCAACGC
CGGACCGTCGCTGACCAAGACTATCAAACGGAAATAGGACCCCAATGATC
CAATTTCCTTTCTTTCTGCCTGGCTTGCCTTAGTGCCACAAGCGCTATGC
GTGAGCTATGCTACCCTGATCTGGGCTTCAAGAGAAGCTGAGGTAGTCTT
GATGTTTGCGGGTCAGATGGGTTGCGAAGCACTGAATTTTGTGCTCAAGC
GCATCGTCAAAGAGGAGAGGCCAAAACGTAGGTATTTCTTTGCAGATGTT
TTGCTTTCCTTCGACATGAAATGGATGGAGCTAACGACTCTCTAAAGAAA
TGCTGGGTAAAGGCTATGGCATGCCATCTTCTCATGCCCAGTTCATGGCC
TATCTCGCCGTCTATGCATCACTCTTCCTCATCTACCGACACAGCCCGAG
CTTATCGCAATCAGGAGCAACCCTTCACTTCTGGACGCGAGTATTGATTT
CCTTGGTGCTGTGTCTCGGTGCTGGTGCAGTAGCCGTTAGCCGCATTTAC
CTGAATTACCACACCCCCAAGCAGGTCCTGGCCGGGTGTGGCGCAGGTAT
GATCTGTGCGTTCGCTTGGTTCTTCATCACCGGGCTACTCAGGTCGCAGG
GATGGATTGATTGGGTTTTGAACCTGGAGGTTGTTCAATTCTTTCGTGTG
AGAGATTTGGTTGTGAACGAAGATCTCGCCGAGGCCGGATGGCAACGCTG
GGAGGCCAAGCAAAAACTGAAGCGGAAGGGGGCCGGAGGTCAGGCATCGT
CGAAAACCGAATAG
back to top

Coding sequence (CDS) from alignment at ACJE01000008.1:419069..419932+

>ASPNIDRAFT_40419-T1 ID=ASPNIDRAFT_40419-T1|Name=ASPNIDRAFT_40419-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2115bp|location=Sequence derived from alignment at ACJE01000008.1:419069..419932+ (Aspergillus niger ATCC 1015)
ATGGCTGATATACCATTGGCATCCTTGTCTTTGACTCATGTCCACTACGA
CCCCAATGATCCAATTTCCTTTCTTTCTGCCTGGCTTGCCTTAGTGCCAC
AAGCGCTATGCGTGAGCTATGCTACCCTGATCTGGGCTTCAAGAGAAGCT
GAGGTAGTCTTGATGTTTGCGGGTCAGATGGGTTGCGAAGCACTGAATTT
TGTGCTCAAGCGCATCGTCAAAGAGGAGAGGCCAAAACAAATGCTGGGTA
AAGGCTATGGCATGCCATCTTCTCATGCCCAGTTCATGGCCTATCTCGCC
GTCTATGCATCACTCTTCCTCATCTACCGACACAGCCCGAGCTTATCGCA
ATCAGGAGCAACCCTTCACTTCTGGACGCGAGTATTGATTTCCTTGGTGC
TGTGTCTCGGTGCTGGTGCAGTAGCCGTTAGCCGCATTTACCTGAATTAC
CACACCCCCAAGCAGGTCCTGGCCGGGTGTGGCGCAGGTATGATCTGTGC
GTTCGCTTGGTTCTTCATCACCGGGCTACTCAGGTCGCAGGGATGGATTG
ATTGGGTTTTGAACCTGGAGGTTGTTCAATTCTTTCGTGTGAGAGATTTG
GTTGTGAACGAAGATCTCGCCGAGGCCGGATGGCAACGCTGGGAGGCCAA
GCAAAAACTGAAGCGGAAGGGGGCCGGAGGTCAGGCATCGTCGAAAACCG
AATAGATGGCTGATATACCATTGGCATCCTTGTCTTTGACTCATGTCCAC
TACGACCCCAATGATCCAATTTCCTTTCTTTCTGCCTGGCTTGCCTTAGT
GCCACAAGCGCTATGCGTGAGCTATGCTACCCTGATCTGGGCTTCAAGAG
AAGCTGAGGTAGTCTTGATGTTTGCGGGTCAGATGGGTTGCGAAGCACTG
AATTTTGTGCTCAAGCGCATCGTCAAAGAGGAGAGGCCAAAACAAATGCT
GGGTAAAGGCTATGGCATGCCATCTTCTCATGCCCAGTTCATGGCCTATC
TCGCCGTCTATGCATCACTCTTCCTCATCTACCGACACAGCCCGAGCTTA
TCGCAATCAGGAGCAACCCTTCACTTCTGGACGCGAGTATTGATTTCCTT
GGTGCTGTGTCTCGGTGCTGGTGCAGTAGCCGTTAGCCGCATTTACCTGA
ATTACCACACCCCCAAGCAGGTCCTGGCCGGGTGTGGCGCAGGTATGATC
TGTGCGTTCGCTTGGTTCTTCATCACCGGGCTACTCAGGTCGCAGGGATG
GATTGATTGGGTTTTGAACCTGGAGGTTGTTCAATTCTTTCGTGTGAGAG
ATTTGGTTGTGAACGAAGATCTCGCCGAGGCCGGATGGCAACGCTGGGAG
GCCAAGCAAAAACTGAAGCGGAAGGGGGCCGGAGGTCAGGCATCGTCGAA
AACCGAATAGATGGCTGATATACCATTGGCATCCTTGTCTTTGACTCATG
TCCACTACGACCCCAATGATCCAATTTCCTTTCTTTCTGCCTGGCTTGCC
TTAGTGCCACAAGCGCTATGCGTGAGCTATGCTACCCTGATCTGGGCTTC
AAGAGAAGCTGAGGTAGTCTTGATGTTTGCGGGTCAGATGGGTTGCGAAG
CACTGAATTTTGTGCTCAAGCGCATCGTCAAAGAGGAGAGGCCAAAACAA
ATGCTGGGTAAAGGCTATGGCATGCCATCTTCTCATGCCCAGTTCATGGC
CTATCTCGCCGTCTATGCATCACTCTTCCTCATCTACCGACACAGCCCGA
GCTTATCGCAATCAGGAGCAACCCTTCACTTCTGGACGCGAGTATTGATT
TCCTTGGTGCTGTGTCTCGGTGCTGGTGCAGTAGCCGTTAGCCGCATTTA
CCTGAATTACCACACCCCCAAGCAGGTCCTGGCCGGGTGTGGCGCAGGTA
TGATCTGTGCGTTCGCTTGGTTCTTCATCACCGGGCTACTCAGGTCGCAG
GGATGGATTGATTGGGTTTTGAACCTGGAGGTTGTTCAATTCTTTCGTGT
GAGAGATTTGGTTGTGAACGAAGATCTCGCCGAGGCCGGATGGCAACGCT
GGGAGGCCAAGCAAAAACTGAAGCGGAAGGGGGCCGGAGGTCAGGCATCG
TCGAAAACCGAATAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_40419ASPNIDRAFT_40419Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_40419-T1.exon1ASPNIDRAFT_40419-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_40419-T1.exon2ASPNIDRAFT_40419-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_40419-T1.exon3ASPNIDRAFT_40419-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_40419-T1.cdsASPNIDRAFT_40419-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_40419-T1ASPNIDRAFT_40419-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036938
DBxrefInterPro:IPR039667
DBxrefInterPro:IPR000326
DBxrefPFAM:PF01569
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000008.1supercontigACJE01000008.1:419069..419932 +
Powered by Drupal