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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000013.1:1756804..1757598+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_40903-T1 ID=ASPNIDRAFT_40903-T1|Name=ASPNIDRAFT_40903-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=795bp|location=Sequence derived from alignment at ACJE01000013.1:1756804..1757598+ (Aspergillus niger ATCC 1015)
ATGTCCGACTGGAGCGCAACCCAATACCTCAAATTCGCCGACGAGCGCGC
CATCCCAACCCAAGATCTCCTAGCACACATCCCCCTGCAATCTCCCTCCC
ACATCGTTGATCTTGGCTGCGGCCCCGGAAACTCCACCGCCATGCTTTCC
GCCCGCTACCCATCCTGCCCGAGCATCTCCGGCATCGACTCCTCCCCAAA
CATGATCGCCCGCGCCAAAGAATCATCTAACAACAATACGACCTTCGCCG
TGGCGGACGTGGAAACCTACTCTCCCCCAACCAACCACCCCGTAGATCTC
TTCTTCTCCAACGCTGTCCTGCACTGGCTTCCCCGTTCTACTCGTCTCCC
TACTATCCGCAGACTCCTACTAACTCTTCCCCCGGGCGGGGTCTTCGCCT
TCCAGGTCCCGGATACCTTGAACGAGCCATCGCATACATCTATGCGGGAG
GTCGCGAGGACGGGGCCCTGGGCGGAACATCTACGGAGTACGTTGGTAGA
GAGGGATGAGTTGGAGTCACCCGGGGAGATTTATGATGCGTTGGTGGACT
GTTGTGAGAGTTTGAGGATTTGGGAGTCGGTGTATTATCATTCCCTTGGG
AGTTGGGGGGAGATTGTGGAGTGGGTGAAGGGGACGGGGTTGAGGCCGTA
TTTGGATGGGTTGAGGGGAGAGGAGGAACGGGGGGAGTTTTTGAAGGTGT
ATGAGGAGAAATTGAGGGAGAAGTATGAGAAAAGGGCTGATGGGAGGGTA
TTGTTGAGGTATCCCAGGTTGTTTGCTGTTGCTGTTCGGAAGTGA back to topCoding sequence (CDS) from alignment at ACJE01000013.1:1756804..1757598+ >ASPNIDRAFT_40903-T1 ID=ASPNIDRAFT_40903-T1|Name=ASPNIDRAFT_40903-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=795bp|location=Sequence derived from alignment at ACJE01000013.1:1756804..1757598+ (Aspergillus niger ATCC 1015)
ATGTCCGACTGGAGCGCAACCCAATACCTCAAATTCGCCGACGAGCGCGC
CATCCCAACCCAAGATCTCCTAGCACACATCCCCCTGCAATCTCCCTCCC
ACATCGTTGATCTTGGCTGCGGCCCCGGAAACTCCACCGCCATGCTTTCC
GCCCGCTACCCATCCTGCCCGAGCATCTCCGGCATCGACTCCTCCCCAAA
CATGATCGCCCGCGCCAAAGAATCATCTAACAACAATACGACCTTCGCCG
TGGCGGACGTGGAAACCTACTCTCCCCCAACCAACCACCCCGTAGATCTC
TTCTTCTCCAACGCTGTCCTGCACTGGCTTCCCCGTTCTACTCGTCTCCC
TACTATCCGCAGACTCCTACTAACTCTTCCCCCGGGCGGGGTCTTCGCCT
TCCAGGTCCCGGATACCTTGAACGAGCCATCGCATACATCTATGCGGGAG
GTCGCGAGGACGGGGCCCTGGGCGGAACATCTACGGAGTACGTTGGTAGA
GAGGGATGAGTTGGAGTCACCCGGGGAGATTTATGATGCGTTGGTGGACT
GTTGTGAGAGTTTGAGGATTTGGGAGTCGGTGTATTATCATTCCCTTGGG
AGTTGGGGGGAGATTGTGGAGTGGGTGAAGGGGACGGGGTTGAGGCCGTA
TTTGGATGGGTTGAGGGGAGAGGAGGAACGGGGGGAGTTTTTGAAGGTGT
ATGAGGAGAAATTGAGGGAGAAGTATGAGAAAAGGGCTGATGGGAGGGTA
TTGTTGAGGTATCCCAGGTTGTTTGCTGTTGCTGTTCGGAAGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0030798 | trans-aconitate 2-methyltransferase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029063 |
| DBxref | InterPro:IPR023149 |
| DBxref | InterPro:IPR041698 |
| DBxref | PFAM:PF05401 |
| DBxref | PFAM:PF05175 |
| DBxref | PFAM:PF13847 |
| DBxref | PFAM:PF13649 |
| DBxref | PFAM:PF13489 |
| DBxref | PFAM:PF08242 |
| DBxref | PFAM:PF08241 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000013.1 | supercontig | ACJE01000013.1:1756804..1757598 + |
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