You are here

Home

ASPNIDRAFT_41055-T1, ASPNIDRAFT_41055-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_41055-T1
Unique NameASPNIDRAFT_41055-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000013.1:1275789..1276779-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_41055-T1 ID=ASPNIDRAFT_41055-T1|Name=ASPNIDRAFT_41055-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=991bp|location=Sequence derived from alignment at ACJE01000013.1:1275789..1276779- (Aspergillus niger ATCC 1015)
ATGGCTCAACAACAGACTGATAATGTGATGCGAAGGTATGTTCCGCCAAT
GTTGTCGTCCCTGTGTTCGGTTTCCCACCTGAGGCCATCATGTTATCTAC
TGCCGATTTCTGGTTCCCGTTATCAGCCCACCCGCTGTCACTCGACCGGA
TTGCTCGTATAGAGGGGTGCGGGGGTGCAGCCAGCCCCCGATGCAACATC
CATGCTATGACGAATGGGGCCCTGAGCTGACCTGCATGTAGAAAGTTGGT
GATCATCGGGGATGGTGCCTGTGGGAAGACCAGTCTGCTGAGCGTCTTCA
CCCTGGGCTATTTTCCAACCGTAAGTCAACCCTCTTCTCCAATGCGCTGA
TCGATGGAGTTTCATTGGCTAACCGGTTTCTGATCTGTAGCACTATGTTC
GTACCTATCACCTCCTTCGCTGACTACCTAGCATGCATCTGACTGTCGCC
TATCAATCAGGTTCCGACGGTATTCGAAAACTATGTGACGGATTGCCGAG
TGGATGGCCGTTCGGTTCAATTGGCACTATGGGATACTGCTGGTCAGGAA
GATTACGAACGATTGCGTCCACTCGCCTATTCCAAGGCGCATGTGATCCT
CATTGGGTTCTCCGTGGACACGCCCGATTCGCTCGAGAACGTCAAACACA
AGGTTGTCTGACCATCTAGTCACTGTTGGACTACGCTGACTGGTTGCTTA
TAGTGGATTGAAGAAGCGAACGAACGATGTCCGGGTGTCCCCATCATCCT
TGTCGGGTTGAAGAAAGATCTGCGGGAAGATCCTCTGGCCGTCGAGGAGA
TGAGAAAGAAGTCGCTAAAGTTCGTGACGCCCAAAGAAGGAAGCGATATT
TCAACGCAGATCGGAGCCCGCAAGTATCTCGAATGTTCCTCGTTAACCGG
CGAGGGCGTCGACGATGTATTCGAGGCGGCCACGCGTGCCGCGCTTCTGA
CGTTCGACAAGCGAAAAAGCTCCTGTTGCATTGTGCTATAA
back to top

Coding sequence (CDS) from alignment at ACJE01000013.1:1275789..1276779-

>ASPNIDRAFT_41055-T1 ID=ASPNIDRAFT_41055-T1|Name=ASPNIDRAFT_41055-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2376bp|location=Sequence derived from alignment at ACJE01000013.1:1275789..1276779- (Aspergillus niger ATCC 1015)
TGGATTGAAGAAGCGAACGAACGATGTCCGGGTGTCCCCATCATCCTTGT
CGGGTTGAAGAAAGATCTGCGGGAAGATCCTCTGGCCGTCGAGGAGATGA
GAAAGAAGTCGCTAAAGTTCGTGACGCCCAAAGAAGGAAGCGATATTTCA
ACGCAGATCGGAGCCCGCAAGTATCTCGAATGTTCCTCGTTAACCGGCGA
GGGCGTCGACGATGTATTCGAGGCGGCCACGCGTGCCGCGCTTCTGACGT
TCGACAAGCGAAAAAGCTCCTGTTGCATTGTGCTATAAGTTCCGACGGTA
TTCGAAAACTATGTGACGGATTGCCGAGTGGATGGCCGTTCGGTTCAATT
GGCACTATGGGATACTGCTGGTCAGGAAGATTACGAACGATTGCGTCCAC
TCGCCTATTCCAAGGCGCATGTGATCCTCATTGGGTTCTCCGTGGACACG
CCCGATTCGCTCGAGAACGTCAAACACAAGAAAGTTGGTGATCATCGGGG
ATGGTGCCTGTGGGAAGACCAGTCTGCTGAGCGTCTTCACCCTGGGCTAT
TTTCCAACCATGGCTCAACAACAGACTGATAATGTGATGCGAAGTGGATT
GAAGAAGCGAACGAACGATGTCCGGGTGTCCCCATCATCCTTGTCGGGTT
GAAGAAAGATCTGCGGGAAGATCCTCTGGCCGTCGAGGAGATGAGAAAGA
AGTCGCTAAAGTTCGTGACGCCCAAAGAAGGAAGCGATATTTCAACGCAG
ATCGGAGCCCGCAAGTATCTCGAATGTTCCTCGTTAACCGGCGAGGGCGT
CGACGATGTATTCGAGGCGGCCACGCGTGCCGCGCTTCTGACGTTCGACA
AGCGAAAAAGCTCCTGTTGCATTGTGCTATAAGTTCCGACGGTATTCGAA
AACTATGTGACGGATTGCCGAGTGGATGGCCGTTCGGTTCAATTGGCACT
ATGGGATACTGCTGGTCAGGAAGATTACGAACGATTGCGTCCACTCGCCT
ATTCCAAGGCGCATGTGATCCTCATTGGGTTCTCCGTGGACACGCCCGAT
TCGCTCGAGAACGTCAAACACAAGAAAGTTGGTGATCATCGGGGATGGTG
CCTGTGGGAAGACCAGTCTGCTGAGCGTCTTCACCCTGGGCTATTTTCCA
ACCATGGCTCAACAACAGACTGATAATGTGATGCGAAGTGGATTGAAGAA
GCGAACGAACGATGTCCGGGTGTCCCCATCATCCTTGTCGGGTTGAAGAA
AGATCTGCGGGAAGATCCTCTGGCCGTCGAGGAGATGAGAAAGAAGTCGC
TAAAGTTCGTGACGCCCAAAGAAGGAAGCGATATTTCAACGCAGATCGGA
GCCCGCAAGTATCTCGAATGTTCCTCGTTAACCGGCGAGGGCGTCGACGA
TGTATTCGAGGCGGCCACGCGTGCCGCGCTTCTGACGTTCGACAAGCGAA
AAAGCTCCTGTTGCATTGTGCTATAAGTTCCGACGGTATTCGAAAACTAT
GTGACGGATTGCCGAGTGGATGGCCGTTCGGTTCAATTGGCACTATGGGA
TACTGCTGGTCAGGAAGATTACGAACGATTGCGTCCACTCGCCTATTCCA
AGGCGCATGTGATCCTCATTGGGTTCTCCGTGGACACGCCCGATTCGCTC
GAGAACGTCAAACACAAGAAAGTTGGTGATCATCGGGGATGGTGCCTGTG
GGAAGACCAGTCTGCTGAGCGTCTTCACCCTGGGCTATTTTCCAACCATG
GCTCAACAACAGACTGATAATGTGATGCGAAGTGGATTGAAGAAGCGAAC
GAACGATGTCCGGGTGTCCCCATCATCCTTGTCGGGTTGAAGAAAGATCT
GCGGGAAGATCCTCTGGCCGTCGAGGAGATGAGAAAGAAGTCGCTAAAGT
TCGTGACGCCCAAAGAAGGAAGCGATATTTCAACGCAGATCGGAGCCCGC
AAGTATCTCGAATGTTCCTCGTTAACCGGCGAGGGCGTCGACGATGTATT
CGAGGCGGCCACGCGTGCCGCGCTTCTGACGTTCGACAAGCGAAAAAGCT
CCTGTTGCATTGTGCTATAAGTTCCGACGGTATTCGAAAACTATGTGACG
GATTGCCGAGTGGATGGCCGTTCGGTTCAATTGGCACTATGGGATACTGC
TGGTCAGGAAGATTACGAACGATTGCGTCCACTCGCCTATTCCAAGGCGC
ATGTGATCCTCATTGGGTTCTCCGTGGACACGCCCGATTCGCTCGAGAAC
GTCAAACACAAGAAAGTTGGTGATCATCGGGGATGGTGCCTGTGGGAAGA
CCAGTCTGCTGAGCGTCTTCACCCTGGGCTATTTTCCAACCATGGCTCAA
CAACAGACTGATAATGTGATGCGAAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0007264small GTPase mediated signal transduction
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RHO2ASPNIDRAFT_41055Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_41055-T1ASPNIDRAFT_41055-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_41055-T1.cdsASPNIDRAFT_41055-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_41055-T1.exon4ASPNIDRAFT_41055-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_41055-T1.exon3ASPNIDRAFT_41055-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_41055-T1.exon2ASPNIDRAFT_41055-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_41055-T1.exon1ASPNIDRAFT_41055-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR003578
DBxrefInterPro:IPR001806
DBxrefInterPro:IPR005225
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF00025
ProductRho GTPase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000013.1supercontigACJE01000013.1:1275789..1276779 -
Powered by Drupal