You are here

Home

ASPNIDRAFT_41315-T1, ASPNIDRAFT_41315-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_41315-T1
Unique NameASPNIDRAFT_41315-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000013.1:413120..413845+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_41315-T1 ID=ASPNIDRAFT_41315-T1|Name=ASPNIDRAFT_41315-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=726bp|location=Sequence derived from alignment at ACJE01000013.1:413120..413845+ (Aspergillus niger ATCC 1015)
ATGGTGTCTCCTCAAGTGTAAGTCAATCCTGCGTTATTCCTGCGCGCGAC
ATGCACAACCGTGGTCTGCTGTCTCGTGATGCTACTCGAGGAATAAAAAC
TGATTTGTCGTCTGTCTTGCAGTACCAACCTGGCCATCATCGTGGTGATG
ATGCAGCTAGCGAAGAAGGTTCCCTTCGAGGACCCCGATGTCCTTATGCT
TGTCCGTGGCATGTACATCCTGTCCAACGTGATCATTCTGGGAGTGTACT
TGTACACTCAGTCGAAGATCAACAAAAAGAATGGTATGCTTCGTGTCCTT
GCTTTCTTTAAGCTACGGTCCTCTAATAATCTGTGATCAGATCTGACTAC
CCTGAAATACGTGGAGCCTTCTCCTATGGGCAGCGGCGAGGAGCCCAAGC
CCGTCACCACTACCAACATGGAGTACGACAAGGGACAGCTGCGCCAGCTG
ATGAGGAGCCAGCTGATGGGTGTGGGTATGATGGGTGTGATGCACCTGTA
CTTTAAGTACACCAACCCCCTCCTGATCCAGTCCATCATTCCTCTCAAGG
GTGCCTTCGAGTCGAACCTGGTCAAGATCCACGTCTTTGGCAAGCCTGCG
ACCGGTGACCTTCAGCGCCCCTTCAAGGCCAACAACAGCTTCCTGAACCA
GGGCCAGATCAAGAGCGACAAGGCCTCCGTTGAGAACGCTGAGAAGAACT
GGAGGGGCGGTGTCAAGGAGGAGTAA
back to top

Coding sequence (CDS) from alignment at ACJE01000013.1:413120..413845+

>ASPNIDRAFT_41315-T1 ID=ASPNIDRAFT_41315-T1|Name=ASPNIDRAFT_41315-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1692bp|location=Sequence derived from alignment at ACJE01000013.1:413120..413845+ (Aspergillus niger ATCC 1015)
ATGGTGTCTCCTCAAGTTACCAACCTGGCCATCATCGTGGTGATGATGCA
GCTAGCGAAGAAGGTTCCCTTCGAGGACCCCGATGTCCTTATGCTTGTCC
GTGGCATGTACATCCTGTCCAACGTGATCATTCTGGGAGTGTACTTGTAC
ACTCAGTCGAAGATCAACAAAAAGAATGATCTGACTACCCTGAAATACGT
GGAGCCTTCTCCTATGGGCAGCGGCGAGGAGCCCAAGCCCGTCACCACTA
CCAACATGGAGTACGACAAGGGACAGCTGCGCCAGCTGATGAGGAGCCAG
CTGATGGGTGTGGGTATGATGGGTGTGATGCACCTGTACTTTAAGTACAC
CAACCCCCTCCTGATCCAGTCCATCATTCCTCTCAAGGGTGCCTTCGAGT
CGAACCTGGTCAAGATCCACGTCTTTGGCAAGCCTGCGACCGGTGACCTT
CAGCGCCCCTTCAAGGCCAACAACAGCTTCCTGAACCAGGGCCAGATCAA
GAGCGACAAGGCCTCCGTTGAGAACGCTGAGAAGAACTGGAGGGGCGGTG
TCAAGGAGGAGTAAATGGTGTCTCCTCAAGTTACCAACCTGGCCATCATC
GTGGTGATGATGCAGCTAGCGAAGAAGGTTCCCTTCGAGGACCCCGATGT
CCTTATGCTTGTCCGTGGCATGTACATCCTGTCCAACGTGATCATTCTGG
GAGTGTACTTGTACACTCAGTCGAAGATCAACAAAAAGAATGATCTGACT
ACCCTGAAATACGTGGAGCCTTCTCCTATGGGCAGCGGCGAGGAGCCCAA
GCCCGTCACCACTACCAACATGGAGTACGACAAGGGACAGCTGCGCCAGC
TGATGAGGAGCCAGCTGATGGGTGTGGGTATGATGGGTGTGATGCACCTG
TACTTTAAGTACACCAACCCCCTCCTGATCCAGTCCATCATTCCTCTCAA
GGGTGCCTTCGAGTCGAACCTGGTCAAGATCCACGTCTTTGGCAAGCCTG
CGACCGGTGACCTTCAGCGCCCCTTCAAGGCCAACAACAGCTTCCTGAAC
CAGGGCCAGATCAAGAGCGACAAGGCCTCCGTTGAGAACGCTGAGAAGAA
CTGGAGGGGCGGTGTCAAGGAGGAGTAAATGGTGTCTCCTCAAGTTACCA
ACCTGGCCATCATCGTGGTGATGATGCAGCTAGCGAAGAAGGTTCCCTTC
GAGGACCCCGATGTCCTTATGCTTGTCCGTGGCATGTACATCCTGTCCAA
CGTGATCATTCTGGGAGTGTACTTGTACACTCAGTCGAAGATCAACAAAA
AGAATGATCTGACTACCCTGAAATACGTGGAGCCTTCTCCTATGGGCAGC
GGCGAGGAGCCCAAGCCCGTCACCACTACCAACATGGAGTACGACAAGGG
ACAGCTGCGCCAGCTGATGAGGAGCCAGCTGATGGGTGTGGGTATGATGG
GTGTGATGCACCTGTACTTTAAGTACACCAACCCCCTCCTGATCCAGTCC
ATCATTCCTCTCAAGGGTGCCTTCGAGTCGAACCTGGTCAAGATCCACGT
CTTTGGCAAGCCTGCGACCGGTGACCTTCAGCGCCCCTTCAAGGCCAACA
ACAGCTTCCTGAACCAGGGCCAGATCAAGAGCGACAAGGCCTCCGTTGAG
AACGCTGAGAAGAACTGGAGGGGCGGTGTCAAGGAGGAGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005783endoplasmic reticulum
Vocabulary: Biological Process
TermDefinition
GO:0045047protein targeting to ER
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_41315ASPNIDRAFT_41315Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_41315-T1.exon1ASPNIDRAFT_41315-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_41315-T1.exon2ASPNIDRAFT_41315-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_41315-T1.exon3ASPNIDRAFT_41315-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_41315-T1.cdsASPNIDRAFT_41315-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_41315-T1ASPNIDRAFT_41315-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR012098
DBxrefPFAM:PF10032
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000013.1supercontigACJE01000013.1:413120..413845 +
Powered by Drupal