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ASPNIDRAFT_41794-T1, ASPNIDRAFT_41794-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_41794-T1
Unique NameASPNIDRAFT_41794-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000002.1:1026642..1027388+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_41794-T1 ID=ASPNIDRAFT_41794-T1|Name=ASPNIDRAFT_41794-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=747bp|location=Sequence derived from alignment at ACJE01000002.1:1026642..1027388+ (Aspergillus niger ATCC 1015)
ATGCCGCCCAAGGACAAAGCTGCGGCGGAAGCATCGTCTTCCCGAGAGAT
CACAGGCCAGAGCGCACTTCCAAGTATGTGGGAAGTTTTCTGGCTATAAG
TGCAAGGCTAACATGAGCTGAAGTCTCGCGGATCAAGAAGATTATTCAAT
TAGACGACGATATCGTACAATGTTCGAGCAACGCTACGTTTGTGATCGCC
ATGGCCACGGTTCGTGACTACGATACTTCCTCCCCTCTTCAGTCAATATC
GAGGCTATCAACACTCACATCTCTTTCACGAAATTAGGAGCTATTCATTC
AATACCTTACCGAACAAGGACACAACGTTGTTAAATCCGAACGAAAGCCG
CGCAAGCTTATCCAATACAAGGACCTGGGTTAGTGACCACTGGGCAAAGG
GATGATAATATGAGTTACTGACGGATGGATATCCAGCTACGGCCGTATCA
CGCATCGACAACCTCGAATTTCTTTCCGACGTGATCCCCAAAACCACGAC
CTATAAGCAGTTCAAGGAGAAACGGGCGAAGGAGAAGGAACCCGGACCCG
AGAAGGGACAGCGCACATTAAACGGCAATTTACCTGCAGCTGTCGAAGAT
AAAGAGGAACTTGAGGAACAACAAAGTCTACAGCCAGTAGATGACAAACC
TTCGAGGGGGTCTCGACCGCCAACGGTGACAATGATGGTGGATCGAACGG
TTGATACATCTGCTGGAGATCAGGATGTTGAGATGACGGACCAGTGA
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Coding sequence (CDS) from alignment at ACJE01000002.1:1026642..1027388+

>ASPNIDRAFT_41794-T1 ID=ASPNIDRAFT_41794-T1|Name=ASPNIDRAFT_41794-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2244bp|location=Sequence derived from alignment at ACJE01000002.1:1026642..1027388+ (Aspergillus niger ATCC 1015)
ATGCCGCCCAAGGACAAAGCTGCGGCGGAAGCATCGTCTTCCCGAGAGAT
CACAGGCCAGAGCGCACTTCCAATCTCGCGGATCAAGAAGATTATTCAAT
TAGACGACGATATCGTACAATGTTCGAGCAACGCTACGTTTGTGATCGCC
ATGGCCACGGAGCTATTCATTCAATACCTTACCGAACAAGGACACAACGT
TGTTAAATCCGAACGAAAGCCGCGCAAGCTTATCCAATACAAGGACCTGG
CTACGGCCGTATCACGCATCGACAACCTCGAATTTCTTTCCGACGTGATC
CCCAAAACCACGACCTATAAGCAGTTCAAGGAGAAACGGGCGAAGGAGAA
GGAACCCGGACCCGAGAAGGGACAGCGCACATTAAACGGCAATTTACCTG
CAGCTGTCGAAGATAAAGAGGAACTTGAGGAACAACAAAGTCTACAGCCA
GTAGATGACAAACCTTCGAGGGGGTCTCGACCGCCAACGGTGACAATGAT
GGTGGATCGAACGGTTGATACATCTGCTGGAGATCAGGATGTTGAGATGA
CGGACCAGTGAATGCCGCCCAAGGACAAAGCTGCGGCGGAAGCATCGTCT
TCCCGAGAGATCACAGGCCAGAGCGCACTTCCAATCTCGCGGATCAAGAA
GATTATTCAATTAGACGACGATATCGTACAATGTTCGAGCAACGCTACGT
TTGTGATCGCCATGGCCACGGAGCTATTCATTCAATACCTTACCGAACAA
GGACACAACGTTGTTAAATCCGAACGAAAGCCGCGCAAGCTTATCCAATA
CAAGGACCTGGCTACGGCCGTATCACGCATCGACAACCTCGAATTTCTTT
CCGACGTGATCCCCAAAACCACGACCTATAAGCAGTTCAAGGAGAAACGG
GCGAAGGAGAAGGAACCCGGACCCGAGAAGGGACAGCGCACATTAAACGG
CAATTTACCTGCAGCTGTCGAAGATAAAGAGGAACTTGAGGAACAACAAA
GTCTACAGCCAGTAGATGACAAACCTTCGAGGGGGTCTCGACCGCCAACG
GTGACAATGATGGTGGATCGAACGGTTGATACATCTGCTGGAGATCAGGA
TGTTGAGATGACGGACCAGTGAATGCCGCCCAAGGACAAAGCTGCGGCGG
AAGCATCGTCTTCCCGAGAGATCACAGGCCAGAGCGCACTTCCAATCTCG
CGGATCAAGAAGATTATTCAATTAGACGACGATATCGTACAATGTTCGAG
CAACGCTACGTTTGTGATCGCCATGGCCACGGAGCTATTCATTCAATACC
TTACCGAACAAGGACACAACGTTGTTAAATCCGAACGAAAGCCGCGCAAG
CTTATCCAATACAAGGACCTGGCTACGGCCGTATCACGCATCGACAACCT
CGAATTTCTTTCCGACGTGATCCCCAAAACCACGACCTATAAGCAGTTCA
AGGAGAAACGGGCGAAGGAGAAGGAACCCGGACCCGAGAAGGGACAGCGC
ACATTAAACGGCAATTTACCTGCAGCTGTCGAAGATAAAGAGGAACTTGA
GGAACAACAAAGTCTACAGCCAGTAGATGACAAACCTTCGAGGGGGTCTC
GACCGCCAACGGTGACAATGATGGTGGATCGAACGGTTGATACATCTGCT
GGAGATCAGGATGTTGAGATGACGGACCAGTGAATGCCGCCCAAGGACAA
AGCTGCGGCGGAAGCATCGTCTTCCCGAGAGATCACAGGCCAGAGCGCAC
TTCCAATCTCGCGGATCAAGAAGATTATTCAATTAGACGACGATATCGTA
CAATGTTCGAGCAACGCTACGTTTGTGATCGCCATGGCCACGGAGCTATT
CATTCAATACCTTACCGAACAAGGACACAACGTTGTTAAATCCGAACGAA
AGCCGCGCAAGCTTATCCAATACAAGGACCTGGCTACGGCCGTATCACGC
ATCGACAACCTCGAATTTCTTTCCGACGTGATCCCCAAAACCACGACCTA
TAAGCAGTTCAAGGAGAAACGGGCGAAGGAGAAGGAACCCGGACCCGAGA
AGGGACAGCGCACATTAAACGGCAATTTACCTGCAGCTGTCGAAGATAAA
GAGGAACTTGAGGAACAACAAAGTCTACAGCCAGTAGATGACAAACCTTC
GAGGGGGTCTCGACCGCCAACGGTGACAATGATGGTGGATCGAACGGTTG
ATACATCTGCTGGAGATCAGGATGTTGAGATGACGGACCAGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0046982protein heterodimerization activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_41794ASPNIDRAFT_41794Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_41794-T1.exon1ASPNIDRAFT_41794-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_41794-T1.exon2ASPNIDRAFT_41794-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_41794-T1.exon3ASPNIDRAFT_41794-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_41794-T1.exon4ASPNIDRAFT_41794-T1.exon4Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_41794-T1.cdsASPNIDRAFT_41794-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_41794-T1ASPNIDRAFT_41794-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR003958
DBxrefInterPro:IPR009072
DBxrefPFAM:PF00808
ProductCCAAT-binding factor
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000002.1supercontigACJE01000002.1:1026642..1027388 +
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