You are here

Home

ASPNIDRAFT_42122-T1, ASPNIDRAFT_42122-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_42122-T1
Unique NameASPNIDRAFT_42122-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000006.1:1376284..1378213+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_42122-T1 ID=ASPNIDRAFT_42122-T1|Name=ASPNIDRAFT_42122-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1930bp|location=Sequence derived from alignment at ACJE01000006.1:1376284..1378213+ (Aspergillus niger ATCC 1015)
ATGCCTCCTTTCGGTAGGATTCCCGTCACTCTCCCCAGGCCTCATGAACC
TCACTACGATCCTGTCGCCCCAAGAAATGTGTATTACGATCCTTTCCTAG
GTTACGCCCCAAGCCCATCTACTGACACTGTCTGTATCCCTTTTGCTACG
AATCGCCTCACCCCGGTTCCTGTTCAACCAGGTCAGCTCCAACAGCCATG
CCCCTCTACCACTCCCTTGACTTCTTCCAGCATCCCTGTGATGAATAACG
GCATTCATAAGCTTGGACCACACGTGAATTTTGCAGGATATCCCAACCCC
ACTAGCAGAGCTGCTCCGCCCAACGAGGTGCCATACGGGAGCTTGGTCCG
CTACATGGAACCCCCTATCTGGGGCGTCATCAAAATTTCAAACGTGAGTG
ACTGGCTGACTCGATTCTCGGCGACGTCTACTAACCTTGGGCCAGATCCC
CTATTCCATCACCAAGCAGGAGATCTTCCAGTTTGTTGGCAGACAGGCAC
GACTTGTTCCAGGCCACGCAGTACACATAATCATGGAACGTCCCACTGCT
AAGACGATGGACTGTTTTGTGGAGTTTGCTTCGACTGAAGATGCTGAAGA
GACGGCGAACCGAATCAACCGAATCTATGAGTGTGGGCGTGCGCCTCGAC
TCGGCAATAGACACGTTGAAGTTGAGCTCAGCAACCAAGAGGAACTGCTG
AAAGTTTTGTTTCCACGTGCAAAGTGCATCAGCTGGGAAAATGGTACGCC
TAAGGTTGTGGAGAATACTGATAGATATTCCACCGGCTTTACTGGCTTTT
TTACCAGCGAAGAGATCATCGGCGCCATTCGTCATGCTGAAATACCTCAA
CGTGTAAGTCCTTCAGCCGGTGTCATTTTATAGCAGCAAGGTCTAACAAC
TTCTTAGTCTCCCTTCGGTGCCAAGTGTCCGCAGCGTACTTACGAATCTA
CCATAAGCACGCTCTATAAGGTAGAGTTTTATTCAGCTGAAGGTGATAGT
ATTCTGACAGAGCACAGTTTCCTTGGTATGCAACCGACATGTACACCGTG
CACGACCGTAACCAGCTATTCGAGTTGACAAACCGCCACATACGTTCTCT
GGTGTCACGGATGGAAAAGACCAAGACCGTTGGGCTTGACCAACGTCTGC
TTCGCGAGCTCCTCTACGCCGGTCTAAATTGCCCTGTATTTAATGAGCGC
CAGAAGTATACCCTTTGCATTCACGCCGGCGAGAAAAGCGAAATTCTCAA
GTTGGGAGACATGAGCAAGTGGTTCCCCTTCGATACTCTGGTCTACTTGC
CTGGCTTTGATTATGACACCTGCGCGGTATGTCCCCTTCCAGAACTATAT
TAGTCTGTCCATACTCTTCTTGGCGTGCTGTCTAGTCATGCATTCTTCGC
CCACTATTTCTTTCCACTGATAGCTGCAGCAGTTGTATGCCAACGTCATC
GCAAACGGTAGATTCGAGGGCGCCTGCCGCGAGTTCCCGAACAATTTCCC
TGAAGACAATACCACTCTCCTATCACCCTTCGGTCGCATTTGGTTTGAGT
GGCCAACCGATGTCGCTAAGAATACTCTTTGGGTTGACGCCGTTAATCGT
GAAACCAATGTGCTCAACTGTCTTCTTCAGAGCGGCTCCATGGGAACAAT
CCACAGACCACTTTCGATGACCAGCACCTCAAGCAATGTTTCTCCCACCT
CTCCAATCACTGATAAAAGTGTGCCACGAAACGAGAATGTGTCCCGGGTC
AGCATTTTGCAGGCCTCATCGCGTCGTGCCAGCGAATGCTGGAACAGCGG
CAGCGTTCTTCTTGATACCGAAGGCGTTTGGAGTCAGAAGGTGTTCTTTA
GCCCGCCTAACAGGTTCCGAACTCCTAGTCACCGCATCACCCATTCATCG
CCCAACTGTCTCAAGGATCTAAACCAGTGA
back to top

Coding sequence (CDS) from alignment at ACJE01000006.1:1376284..1378213+

>ASPNIDRAFT_42122-T1 ID=ASPNIDRAFT_42122-T1|Name=ASPNIDRAFT_42122-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=6468bp|location=Sequence derived from alignment at ACJE01000006.1:1376284..1378213+ (Aspergillus niger ATCC 1015)
ATGCCTCCTTTCGGTAGGATTCCCGTCACTCTCCCCAGGCCTCATGAACC
TCACTACGATCCTGTCGCCCCAAGAAATGTGTATTACGATCCTTTCCTAG
GTTACGCCCCAAGCCCATCTACTGACACTGTCTGTATCCCTTTTGCTACG
AATCGCCTCACCCCGGTTCCTGTTCAACCAGGTCAGCTCCAACAGCCATG
CCCCTCTACCACTCCCTTGACTTCTTCCAGCATCCCTGTGATGAATAACG
GCATTCATAAGCTTGGACCACACGTGAATTTTGCAGGATATCCCAACCCC
ACTAGCAGAGCTGCTCCGCCCAACGAGGTGCCATACGGGAGCTTGGTCCG
CTACATGGAACCCCCTATCTGGGGCGTCATCAAAATTTCAAACATCCCCT
ATTCCATCACCAAGCAGGAGATCTTCCAGTTTGTTGGCAGACAGGCACGA
CTTGTTCCAGGCCACGCAGTACACATAATCATGGAACGTCCCACTGCTAA
GACGATGGACTGTTTTGTGGAGTTTGCTTCGACTGAAGATGCTGAAGAGA
CGGCGAACCGAATCAACCGAATCTATGAGTGTGGGCGTGCGCCTCGACTC
GGCAATAGACACGTTGAAGTTGAGCTCAGCAACCAAGAGGAACTGCTGAA
AGTTTTGTTTCCACGTGCAAAGTGCATCAGCTGGGAAAATGGTACGCCTA
AGGTTGTGGAGAATACTGATAGATATTCCACCGGCTTTACTGGCTTTTTT
ACCAGCGAAGAGATCATCGGCGCCATTCGTCATGCTGAAATACCTCAACG
TTTTCCTTGGTATGCAACCGACATGTACACCGTGCACGACCGTAACCAGC
TATTCGAGTTGACAAACCGCCACATACGTTCTCTGGTGTCACGGATGGAA
AAGACCAAGACCGTTGGGCTTGACCAACGTCTGCTTCGCGAGCTCCTCTA
CGCCGGTCTAAATTGCCCTGTATTTAATGAGCGCCAGAAGTATACCCTTT
GCATTCACGCCGGCGAGAAAAGCGAAATTCTCAAGTTGGGAGACATGAGC
AAGTGGTTCCCCTTCGATACTCTGGTCTACTTGCCTGGCTTTGATTATGA
CACCTGCGCGCTGCAGCAGTTGTATGCCAACGTCATCGCAAACGGTAGAT
TCGAGGGCGCCTGCCGCGAGTTCCCGAACAATTTCCCTGAAGACAATACC
ACTCTCCTATCACCCTTCGGTCGCATTTGGTTTGAGTGGCCAACCGATGT
CGCTAAGAATACTCTTTGGGTTGACGCCGTTAATCGTGAAACCAATGTGC
TCAACTGTCTTCTTCAGAGCGGCTCCATGGGAACAATCCACAGACCACTT
TCGATGACCAGCACCTCAAGCAATGTTTCTCCCACCTCTCCAATCACTGA
TAAAAGTGTGCCACGAAACGAGAATGTGTCCCGGGTCAGCATTTTGCAGG
CCTCATCGCGTCGTGCCAGCGAATGCTGGAACAGCGGCAGCGTTCTTCTT
GATACCGAAGGCGTTTGGAGTCAGAAGGTGTTCTTTAGCCCGCCTAACAG
GTTCCGAACTCCTAGTCACCGCATCACCCATTCATCGCCCAACTGTCTCA
AGGATCTAAACCAGTGAATGCCTCCTTTCGGTAGGATTCCCGTCACTCTC
CCCAGGCCTCATGAACCTCACTACGATCCTGTCGCCCCAAGAAATGTGTA
TTACGATCCTTTCCTAGGTTACGCCCCAAGCCCATCTACTGACACTGTCT
GTATCCCTTTTGCTACGAATCGCCTCACCCCGGTTCCTGTTCAACCAGGT
CAGCTCCAACAGCCATGCCCCTCTACCACTCCCTTGACTTCTTCCAGCAT
CCCTGTGATGAATAACGGCATTCATAAGCTTGGACCACACGTGAATTTTG
CAGGATATCCCAACCCCACTAGCAGAGCTGCTCCGCCCAACGAGGTGCCA
TACGGGAGCTTGGTCCGCTACATGGAACCCCCTATCTGGGGCGTCATCAA
AATTTCAAACATCCCCTATTCCATCACCAAGCAGGAGATCTTCCAGTTTG
TTGGCAGACAGGCACGACTTGTTCCAGGCCACGCAGTACACATAATCATG
GAACGTCCCACTGCTAAGACGATGGACTGTTTTGTGGAGTTTGCTTCGAC
TGAAGATGCTGAAGAGACGGCGAACCGAATCAACCGAATCTATGAGTGTG
GGCGTGCGCCTCGACTCGGCAATAGACACGTTGAAGTTGAGCTCAGCAAC
CAAGAGGAACTGCTGAAAGTTTTGTTTCCACGTGCAAAGTGCATCAGCTG
GGAAAATGGTACGCCTAAGGTTGTGGAGAATACTGATAGATATTCCACCG
GCTTTACTGGCTTTTTTACCAGCGAAGAGATCATCGGCGCCATTCGTCAT
GCTGAAATACCTCAACGTTTTCCTTGGTATGCAACCGACATGTACACCGT
GCACGACCGTAACCAGCTATTCGAGTTGACAAACCGCCACATACGTTCTC
TGGTGTCACGGATGGAAAAGACCAAGACCGTTGGGCTTGACCAACGTCTG
CTTCGCGAGCTCCTCTACGCCGGTCTAAATTGCCCTGTATTTAATGAGCG
CCAGAAGTATACCCTTTGCATTCACGCCGGCGAGAAAAGCGAAATTCTCA
AGTTGGGAGACATGAGCAAGTGGTTCCCCTTCGATACTCTGGTCTACTTG
CCTGGCTTTGATTATGACACCTGCGCGCTGCAGCAGTTGTATGCCAACGT
CATCGCAAACGGTAGATTCGAGGGCGCCTGCCGCGAGTTCCCGAACAATT
TCCCTGAAGACAATACCACTCTCCTATCACCCTTCGGTCGCATTTGGTTT
GAGTGGCCAACCGATGTCGCTAAGAATACTCTTTGGGTTGACGCCGTTAA
TCGTGAAACCAATGTGCTCAACTGTCTTCTTCAGAGCGGCTCCATGGGAA
CAATCCACAGACCACTTTCGATGACCAGCACCTCAAGCAATGTTTCTCCC
ACCTCTCCAATCACTGATAAAAGTGTGCCACGAAACGAGAATGTGTCCCG
GGTCAGCATTTTGCAGGCCTCATCGCGTCGTGCCAGCGAATGCTGGAACA
GCGGCAGCGTTCTTCTTGATACCGAAGGCGTTTGGAGTCAGAAGGTGTTC
TTTAGCCCGCCTAACAGGTTCCGAACTCCTAGTCACCGCATCACCCATTC
ATCGCCCAACTGTCTCAAGGATCTAAACCAGTGAATGCCTCCTTTCGGTA
GGATTCCCGTCACTCTCCCCAGGCCTCATGAACCTCACTACGATCCTGTC
GCCCCAAGAAATGTGTATTACGATCCTTTCCTAGGTTACGCCCCAAGCCC
ATCTACTGACACTGTCTGTATCCCTTTTGCTACGAATCGCCTCACCCCGG
TTCCTGTTCAACCAGGTCAGCTCCAACAGCCATGCCCCTCTACCACTCCC
TTGACTTCTTCCAGCATCCCTGTGATGAATAACGGCATTCATAAGCTTGG
ACCACACGTGAATTTTGCAGGATATCCCAACCCCACTAGCAGAGCTGCTC
CGCCCAACGAGGTGCCATACGGGAGCTTGGTCCGCTACATGGAACCCCCT
ATCTGGGGCGTCATCAAAATTTCAAACATCCCCTATTCCATCACCAAGCA
GGAGATCTTCCAGTTTGTTGGCAGACAGGCACGACTTGTTCCAGGCCACG
CAGTACACATAATCATGGAACGTCCCACTGCTAAGACGATGGACTGTTTT
GTGGAGTTTGCTTCGACTGAAGATGCTGAAGAGACGGCGAACCGAATCAA
CCGAATCTATGAGTGTGGGCGTGCGCCTCGACTCGGCAATAGACACGTTG
AAGTTGAGCTCAGCAACCAAGAGGAACTGCTGAAAGTTTTGTTTCCACGT
GCAAAGTGCATCAGCTGGGAAAATGGTACGCCTAAGGTTGTGGAGAATAC
TGATAGATATTCCACCGGCTTTACTGGCTTTTTTACCAGCGAAGAGATCA
TCGGCGCCATTCGTCATGCTGAAATACCTCAACGTTTTCCTTGGTATGCA
ACCGACATGTACACCGTGCACGACCGTAACCAGCTATTCGAGTTGACAAA
CCGCCACATACGTTCTCTGGTGTCACGGATGGAAAAGACCAAGACCGTTG
GGCTTGACCAACGTCTGCTTCGCGAGCTCCTCTACGCCGGTCTAAATTGC
CCTGTATTTAATGAGCGCCAGAAGTATACCCTTTGCATTCACGCCGGCGA
GAAAAGCGAAATTCTCAAGTTGGGAGACATGAGCAAGTGGTTCCCCTTCG
ATACTCTGGTCTACTTGCCTGGCTTTGATTATGACACCTGCGCGCTGCAG
CAGTTGTATGCCAACGTCATCGCAAACGGTAGATTCGAGGGCGCCTGCCG
CGAGTTCCCGAACAATTTCCCTGAAGACAATACCACTCTCCTATCACCCT
TCGGTCGCATTTGGTTTGAGTGGCCAACCGATGTCGCTAAGAATACTCTT
TGGGTTGACGCCGTTAATCGTGAAACCAATGTGCTCAACTGTCTTCTTCA
GAGCGGCTCCATGGGAACAATCCACAGACCACTTTCGATGACCAGCACCT
CAAGCAATGTTTCTCCCACCTCTCCAATCACTGATAAAAGTGTGCCACGA
AACGAGAATGTGTCCCGGGTCAGCATTTTGCAGGCCTCATCGCGTCGTGC
CAGCGAATGCTGGAACAGCGGCAGCGTTCTTCTTGATACCGAAGGCGTTT
GGAGTCAGAAGGTGTTCTTTAGCCCGCCTAACAGGTTCCGAACTCCTAGT
CACCGCATCACCCATTCATCGCCCAACTGTCTCAAGGATCTAAACCAGTG
AATGCCTCCTTTCGGTAGGATTCCCGTCACTCTCCCCAGGCCTCATGAAC
CTCACTACGATCCTGTCGCCCCAAGAAATGTGTATTACGATCCTTTCCTA
GGTTACGCCCCAAGCCCATCTACTGACACTGTCTGTATCCCTTTTGCTAC
GAATCGCCTCACCCCGGTTCCTGTTCAACCAGGTCAGCTCCAACAGCCAT
GCCCCTCTACCACTCCCTTGACTTCTTCCAGCATCCCTGTGATGAATAAC
GGCATTCATAAGCTTGGACCACACGTGAATTTTGCAGGATATCCCAACCC
CACTAGCAGAGCTGCTCCGCCCAACGAGGTGCCATACGGGAGCTTGGTCC
GCTACATGGAACCCCCTATCTGGGGCGTCATCAAAATTTCAAACATCCCC
TATTCCATCACCAAGCAGGAGATCTTCCAGTTTGTTGGCAGACAGGCACG
ACTTGTTCCAGGCCACGCAGTACACATAATCATGGAACGTCCCACTGCTA
AGACGATGGACTGTTTTGTGGAGTTTGCTTCGACTGAAGATGCTGAAGAG
ACGGCGAACCGAATCAACCGAATCTATGAGTGTGGGCGTGCGCCTCGACT
CGGCAATAGACACGTTGAAGTTGAGCTCAGCAACCAAGAGGAACTGCTGA
AAGTTTTGTTTCCACGTGCAAAGTGCATCAGCTGGGAAAATGGTACGCCT
AAGGTTGTGGAGAATACTGATAGATATTCCACCGGCTTTACTGGCTTTTT
TACCAGCGAAGAGATCATCGGCGCCATTCGTCATGCTGAAATACCTCAAC
GTTTTCCTTGGTATGCAACCGACATGTACACCGTGCACGACCGTAACCAG
CTATTCGAGTTGACAAACCGCCACATACGTTCTCTGGTGTCACGGATGGA
AAAGACCAAGACCGTTGGGCTTGACCAACGTCTGCTTCGCGAGCTCCTCT
ACGCCGGTCTAAATTGCCCTGTATTTAATGAGCGCCAGAAGTATACCCTT
TGCATTCACGCCGGCGAGAAAAGCGAAATTCTCAAGTTGGGAGACATGAG
CAAGTGGTTCCCCTTCGATACTCTGGTCTACTTGCCTGGCTTTGATTATG
ACACCTGCGCGCTGCAGCAGTTGTATGCCAACGTCATCGCAAACGGTAGA
TTCGAGGGCGCCTGCCGCGAGTTCCCGAACAATTTCCCTGAAGACAATAC
CACTCTCCTATCACCCTTCGGTCGCATTTGGTTTGAGTGGCCAACCGATG
TCGCTAAGAATACTCTTTGGGTTGACGCCGTTAATCGTGAAACCAATGTG
CTCAACTGTCTTCTTCAGAGCGGCTCCATGGGAACAATCCACAGACCACT
TTCGATGACCAGCACCTCAAGCAATGTTTCTCCCACCTCTCCAATCACTG
ATAAAAGTGTGCCACGAAACGAGAATGTGTCCCGGGTCAGCATTTTGCAG
GCCTCATCGCGTCGTGCCAGCGAATGCTGGAACAGCGGCAGCGTTCTTCT
TGATACCGAAGGCGTTTGGAGTCAGAAGGTGTTCTTTAGCCCGCCTAACA
GGTTCCGAACTCCTAGTCACCGCATCACCCATTCATCGCCCAACTGTCTC
AAGGATCTAAACCAGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_42122ASPNIDRAFT_42122Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_42122-T1.exon1ASPNIDRAFT_42122-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_42122-T1.exon2ASPNIDRAFT_42122-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_42122-T1.exon3ASPNIDRAFT_42122-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_42122-T1.exon4ASPNIDRAFT_42122-T1.exon4Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_42122-T1.cdsASPNIDRAFT_42122-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_42122-T1ASPNIDRAFT_42122-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR000504
DBxrefInterPro:IPR012677
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000006.1supercontigACJE01000006.1:1376284..1378213 +
Powered by Drupal