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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000006.1:1090147..1091856- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_42214-T1 ID=ASPNIDRAFT_42214-T1|Name=ASPNIDRAFT_42214-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1710bp|location=Sequence derived from alignment at ACJE01000006.1:1090147..1091856- (Aspergillus niger ATCC 1015)
ATGTCGACGACCTCCAAGCGTAAGCGTGCAAGGAAGGCCTGCATTCCATG
CCACCAGCGGAAACGGAAATGCGACAACCAATATCCTTGCAGCATGTGTA
CCACTTACGACTATAACTGCAGATACGACAAGGACCTGACAGGAACTGTG
GGAGAAAGCGTTGATGTCCCACCCCAAGCTAAGCGCATCAGCCTTGATGG
CAGAAGTCGTTTGACCAACCAGCCACACGTAGAGCAAGGCTCCCACGAAG
CCAATAGCTCATCGACAAAAAGTCCCGCCACTGTGACCAGCACATCACCT
GGAATCTTTGACGACAATAAGTGCAGATACACCGGGGCATCAGCGGCCAT
GGCTTTTCCACATGTCCTGGGCGTTAGTCTCGGTGCTGACAGTCCTCCGC
GATTGCGGTCATGCGCCTACAACTTTGGCAACCGACCAGACGAGGCTTCA
AACACCCACAGCTTTCTCGGAGATCTGATCTCCGAGGAGGACGTCGGCTA
CTATGCGGGGGTTTATTTCGCTGTCATGAACCCGATCGGCGACATCTTGG
ACCCAAGAATATTCGCCGATCGATGTCACCAATATTACAACGGCGTTTCT
AGCACAGACATTGCATTTGCTGCTGTGGCTGCTGGCGTAGCCTGCCTCGG
GTCCTTTCTCTCATCCAACAGACATGCACGGGAGACTGACCTGGTGCGAT
ACGCTAAGGCGATTCTCGATGATCCATCGTCAATACGCACGCTAAATATT
GACCACATACTCGCATGGGACATGCGAGCATTCTACCTTCGCGCCACAAG
CCGCCCCAAGAATGCCTGGATTGCCTCCTGTACCGTCATGCACCTGTGTG
AAACAGTTGGGTTGCACGACGAAGCGAGTATCAAGAAGATGGCATCCAAG
GCCGGCTCTGCTGTTCTTGGGCTTGATGCCGACCGACTGAGGAGAATCTT
TTGGGTCTCTTGGGCTGGACACAATATGTTATCCTATGAGCAAGATTGTT
CTGCTGTAAACTTTCGCTATGTGACTTGTCAGTCTTTTGTAGCAACACCA
GGGTCCGTTGCCGACCAGTTCGTCCGATTAGTCCAACTTACCCCAGCCCC
GAACTCCCCGTTTCGTCTCAAATGGGAGCCTTCGAATCTGAGTGAGGAAC
TATTTGAACGTCTAAAAGCAGTGACTGAACTCCAGGTCAAACATCCATTT
TTGGTGGTGACCGCGGCAGACATCGCCTTTTGCTTTTATCGTCGCCTGTA
CCAGGCTCAGACGGGGATCTCAGATGATTTTATCAATCTCGTCATTGATT
GCGGTAACGCAGGGGTTGAGGCAGCCGAGAAGCTCGCTAACGAGGGTCAT
TTATTCTGGAACATCCTTGGCAGCGTCTTCCAATTTGCTTGTGTTCTGTT
GGCTATTGACAGGCCGATTGCCTCCGCTCACATCGGCACTGTCTTCAAGG
GTTTGGAGAACTTAGTCAAGGCGGCCGATACAACACTGACGCGCGAGGCA
TTATCAATAGCACGACATCTACTCAGCCTCAAGACGGCTAGAAAGCGCAA
GGAGCTGGCTGAGCTGGAAGCGATCGAGGCAGGCTATCAATTTGGTCTGA
CACCACCGGGACCAGAGGCCAGTGTCTCTGTGCCTGACATCAGCTGGGAT
CTATACTGGGATCAGTTCTTTATTGAGCCGTATCTGTCGATGCCTGGTGG
AGGTATCTAG back to topCoding sequence (CDS) from alignment at ACJE01000006.1:1090147..1091856- >ASPNIDRAFT_42214-T1 ID=ASPNIDRAFT_42214-T1|Name=ASPNIDRAFT_42214-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1710bp|location=Sequence derived from alignment at ACJE01000006.1:1090147..1091856- (Aspergillus niger ATCC 1015)
ATGTCGACGACCTCCAAGCGTAAGCGTGCAAGGAAGGCCTGCATTCCATG
CCACCAGCGGAAACGGAAATGCGACAACCAATATCCTTGCAGCATGTGTA
CCACTTACGACTATAACTGCAGATACGACAAGGACCTGACAGGAACTGTG
GGAGAAAGCGTTGATGTCCCACCCCAAGCTAAGCGCATCAGCCTTGATGG
CAGAAGTCGTTTGACCAACCAGCCACACGTAGAGCAAGGCTCCCACGAAG
CCAATAGCTCATCGACAAAAAGTCCCGCCACTGTGACCAGCACATCACCT
GGAATCTTTGACGACAATAAGTGCAGATACACCGGGGCATCAGCGGCCAT
GGCTTTTCCACATGTCCTGGGCGTTAGTCTCGGTGCTGACAGTCCTCCGC
GATTGCGGTCATGCGCCTACAACTTTGGCAACCGACCAGACGAGGCTTCA
AACACCCACAGCTTTCTCGGAGATCTGATCTCCGAGGAGGACGTCGGCTA
CTATGCGGGGGTTTATTTCGCTGTCATGAACCCGATCGGCGACATCTTGG
ACCCAAGAATATTCGCCGATCGATGTCACCAATATTACAACGGCGTTTCT
AGCACAGACATTGCATTTGCTGCTGTGGCTGCTGGCGTAGCCTGCCTCGG
GTCCTTTCTCTCATCCAACAGACATGCACGGGAGACTGACCTGGTGCGAT
ACGCTAAGGCGATTCTCGATGATCCATCGTCAATACGCACGCTAAATATT
GACCACATACTCGCATGGGACATGCGAGCATTCTACCTTCGCGCCACAAG
CCGCCCCAAGAATGCCTGGATTGCCTCCTGTACCGTCATGCACCTGTGTG
AAACAGTTGGGTTGCACGACGAAGCGAGTATCAAGAAGATGGCATCCAAG
GCCGGCTCTGCTGTTCTTGGGCTTGATGCCGACCGACTGAGGAGAATCTT
TTGGGTCTCTTGGGCTGGACACAATATGTTATCCTATGAGCAAGATTGTT
CTGCTGTAAACTTTCGCTATGTGACTTGTCAGTCTTTTGTAGCAACACCA
GGGTCCGTTGCCGACCAGTTCGTCCGATTAGTCCAACTTACCCCAGCCCC
GAACTCCCCGTTTCGTCTCAAATGGGAGCCTTCGAATCTGAGTGAGGAAC
TATTTGAACGTCTAAAAGCAGTGACTGAACTCCAGGTCAAACATCCATTT
TTGGTGGTGACCGCGGCAGACATCGCCTTTTGCTTTTATCGTCGCCTGTA
CCAGGCTCAGACGGGGATCTCAGATGATTTTATCAATCTCGTCATTGATT
GCGGTAACGCAGGGGTTGAGGCAGCCGAGAAGCTCGCTAACGAGGGTCAT
TTATTCTGGAACATCCTTGGCAGCGTCTTCCAATTTGCTTGTGTTCTGTT
GGCTATTGACAGGCCGATTGCCTCCGCTCACATCGGCACTGTCTTCAAGG
GTTTGGAGAACTTAGTCAAGGCGGCCGATACAACACTGACGCGCGAGGCA
TTATCAATAGCACGACATCTACTCAGCCTCAAGACGGCTAGAAAGCGCAA
GGAGCTGGCTGAGCTGGAAGCGATCGAGGCAGGCTATCAATTTGGTCTGA
CACCACCGGGACCAGAGGCCAGTGTCTCTGTGCCTGACATCAGCTGGGAT
CTATACTGGGATCAGTTCTTTATTGAGCCGTATCTGTCGATGCCTGGTGG
AGGTATCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000061.1 |
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR007219 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000006.1 | supercontig | ACJE01000006.1:1090147..1091856 - |
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