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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000020.1:534916..536790- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_42733-T1 ID=ASPNIDRAFT_42733-T1|Name=ASPNIDRAFT_42733-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1875bp|location=Sequence derived from alignment at ACJE01000020.1:534916..536790- (Aspergillus niger ATCC 1015)
ATGTTCGCGTCGAGTATCCGATCGAGAGCTCTGGGATTGAGCCCACGAGC
CCGGTTTGAGAATACGTACGAGAGAATCTTCCCTTCCAATGCTTCTCTTT
CCCTCCTCAAAATTCGACAGATGCTGATAACCATTGTTACTAGTCGTCTT
CCATCTTCCACTAGCGGGCGCCGTTATAGATCCGATGAGCCCCTCAACCG
AATTTCCTCGAAAATCACACAACCCAAATCCCAGGGTGCTTCGCAAGCAA
TGCTCTACGCCACCGGCCTAACAGAGGAAGACATGTCCAAGCCACAGGTC
GGTATCTCCTCGGTGTGGTTCGAGGGTAACCCATGCAACATGCACTTGCA
TGACCTGTCTGCCATTGTGCGCGATTCCGTGCTCCGTGCGGGTCTGGTCC
CTATGCGATTCAACTCAGTTGGAGTGTCGGATGGGATCAGTATGGGTACA
AAGGGAATGAGATACAGCCTGCAGAGCCGGGAGCTGATCGCTGATGGTAT
TGAGACGGTGATGAATGCCCAGTGGTACGATGCGAATGTGTCGCTCCCGG
GTTGTGATAAGAATATGCCAGGTGTATTAATAGCGATGGGACGCACGAAC
CGACCTAGCATCATGGTCTACGGTGGCAGTATCAAGCCTGGATGCAGTGC
AAAGGGCCAGAAATTGGACCTGGTCAGTGCATTCCAGTCATATGGCCAGT
TCATCACCGGCCAGATCGACGAGAAGGAGCGGTTCGATATCATTCGCAAT
GCATGCCCCGGCAGAGGTGCATGCGGTGGCATGTACACGGCTAATACGCT
GGCCACGGCTATTGAGACTATGGGAATGACTATTCCTGGTAGTAGTAGTT
GCCCGGCAGATGATCGCAAGAAGCTAGTTGAGTGCGAAAATATTGGCGAG
GTGGTTAAAAATATGCTCAGGGAAGATATCAAACCCAGGGATATCTTAAC
ACGTCAAGCCTTCGAGAATGCAATGATTGTAGTGAACGTGCTGGGTGGCA
GTACTAATGCTGTTTTACATCTGATTGCCATTGCTGACTCTGTCGGTATC
AAGTTGACTATTGATGACTTCCAGGCAGTATCTGATAAGACACCGTTCCT
GGCTGATTTGAAGCCATCTGGAAAGTATCTTATGAATGATCTTTATAATA
TCGGTGGCACACCAGCCCTCCTGAAATATCTCCTGAAGGAGGGCTTGATC
GATGGCTCAGGAGTTACTGTTACCGGTAAAACAATGAAGGAAAATGTAGC
CTCATGGCCTGATTTTCCTGCTGACCAGGATATCATCCGCCCCCTCAACA
ACCCTATCAAACCATCTGGCCATCTCCAGATTCTTCGCGGATCGCTGGCC
CCGGGCGGTTCCGTGGGTAAGATTACTGGAAAGGAGGGTCTGCGGTTTGA
GGGTATAGCTAAATGCTATGATTACGAAGATGCATTCATTGAGTCCCTTG
AGCGGGGTGAGATCAAGAAGGGCGAGAAAACAGTCGTGATTATCCGGTAT
GAAGGCCCCAAGGGTGGCCCAGGAATGCCTGAGATGCTCAAGCCCAGCGC
GGCCATTATGGGCGCTGGACTTGGCCAGGACGTTGCTCTTCTTACAGATG
GAAGATTCTCGGGTGGCAGTCACGGATTTTTGATCGGACATATCGTGCCG
GAAGCCATGGAAGGCGGCCCGATCGCGTTGGCTCGAGACGGTGATCGGAT
CGTGATTGATGCTGAGGAAAGAGTGGTCGATCTGGATATCTCTACTGAGG
AGCTCGAGAAGAGGAGGAAGGAGTGGAACGCACCCCCGCTCCGGTACCAG
AAGGGAACTCTGAAGAAATATTGCACGCTGGTCAGCGACGCCAGCCATGG
TTGTGTCACGGACGGACCGATATAG back to topCoding sequence (CDS) from alignment at ACJE01000020.1:534916..536790- >ASPNIDRAFT_42733-T1 ID=ASPNIDRAFT_42733-T1|Name=ASPNIDRAFT_42733-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1875bp|location=Sequence derived from alignment at ACJE01000020.1:534916..536790- (Aspergillus niger ATCC 1015)
ATGTTCGCGTCGAGTATCCGATCGAGAGCTCTGGGATTGAGCCCACGAGC
CCGGTTTGAGAATACGTACGAGAGAATCTTCCCTTCCAATGCTTCTCTTT
CCCTCCTCAAAATTCGACAGATGCTGATAACCATTGTTACTAGTCGTCTT
CCATCTTCCACTAGCGGGCGCCGTTATAGATCCGATGAGCCCCTCAACCG
AATTTCCTCGAAAATCACACAACCCAAATCCCAGGGTGCTTCGCAAGCAA
TGCTCTACGCCACCGGCCTAACAGAGGAAGACATGTCCAAGCCACAGGTC
GGTATCTCCTCGGTGTGGTTCGAGGGTAACCCATGCAACATGCACTTGCA
TGACCTGTCTGCCATTGTGCGCGATTCCGTGCTCCGTGCGGGTCTGGTCC
CTATGCGATTCAACTCAGTTGGAGTGTCGGATGGGATCAGTATGGGTACA
AAGGGAATGAGATACAGCCTGCAGAGCCGGGAGCTGATCGCTGATGGTAT
TGAGACGGTGATGAATGCCCAGTGGTACGATGCGAATGTGTCGCTCCCGG
GTTGTGATAAGAATATGCCAGGTGTATTAATAGCGATGGGACGCACGAAC
CGACCTAGCATCATGGTCTACGGTGGCAGTATCAAGCCTGGATGCAGTGC
AAAGGGCCAGAAATTGGACCTGGTCAGTGCATTCCAGTCATATGGCCAGT
TCATCACCGGCCAGATCGACGAGAAGGAGCGGTTCGATATCATTCGCAAT
GCATGCCCCGGCAGAGGTGCATGCGGTGGCATGTACACGGCTAATACGCT
GGCCACGGCTATTGAGACTATGGGAATGACTATTCCTGGTAGTAGTAGTT
GCCCGGCAGATGATCGCAAGAAGCTAGTTGAGTGCGAAAATATTGGCGAG
GTGGTTAAAAATATGCTCAGGGAAGATATCAAACCCAGGGATATCTTAAC
ACGTCAAGCCTTCGAGAATGCAATGATTGTAGTGAACGTGCTGGGTGGCA
GTACTAATGCTGTTTTACATCTGATTGCCATTGCTGACTCTGTCGGTATC
AAGTTGACTATTGATGACTTCCAGGCAGTATCTGATAAGACACCGTTCCT
GGCTGATTTGAAGCCATCTGGAAAGTATCTTATGAATGATCTTTATAATA
TCGGTGGCACACCAGCCCTCCTGAAATATCTCCTGAAGGAGGGCTTGATC
GATGGCTCAGGAGTTACTGTTACCGGTAAAACAATGAAGGAAAATGTAGC
CTCATGGCCTGATTTTCCTGCTGACCAGGATATCATCCGCCCCCTCAACA
ACCCTATCAAACCATCTGGCCATCTCCAGATTCTTCGCGGATCGCTGGCC
CCGGGCGGTTCCGTGGGTAAGATTACTGGAAAGGAGGGTCTGCGGTTTGA
GGGTATAGCTAAATGCTATGATTACGAAGATGCATTCATTGAGTCCCTTG
AGCGGGGTGAGATCAAGAAGGGCGAGAAAACAGTCGTGATTATCCGGTAT
GAAGGCCCCAAGGGTGGCCCAGGAATGCCTGAGATGCTCAAGCCCAGCGC
GGCCATTATGGGCGCTGGACTTGGCCAGGACGTTGCTCTTCTTACAGATG
GAAGATTCTCGGGTGGCAGTCACGGATTTTTGATCGGACATATCGTGCCG
GAAGCCATGGAAGGCGGCCCGATCGCGTTGGCTCGAGACGGTGATCGGAT
CGTGATTGATGCTGAGGAAAGAGTGGTCGATCTGGATATCTCTACTGAGG
AGCTCGAGAAGAGGAGGAAGGAGTGGAACGCACCCCCGCTCCGGTACCAG
AAGGGAACTCTGAAGAAATATTGCACGCTGGTCAGCGACGCCAGCCATGG
TTGTGTCACGGACGGACCGATATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009082 | branched-chain amino acid biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
| GO:0004160 | dihydroxy-acid dehydratase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR037237 |
| DBxref | InterPro:IPR020558 |
| DBxref | InterPro:IPR000581 |
| DBxref | InterPro:IPR042096 |
| DBxref | InterPro:IPR004404 |
| DBxref | PFAM:PF00920 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000020.1 | supercontig | ACJE01000020.1:534916..536790 - |
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