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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000020.1:1066215..1068108- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_42889-T1 ID=ASPNIDRAFT_42889-T1|Name=ASPNIDRAFT_42889-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1894bp|location=Sequence derived from alignment at ACJE01000020.1:1066215..1068108- (Aspergillus niger ATCC 1015)
ATGCGAACCCAACGATTTGTGGTCTGGCTAGGCACCTTTGCCCTCATCTC
ATTATGTCTCATTCTTTTCAGAAGTTCCAGTCCTTCACCCTCACCTATTG
TGGACCTCTATCCTTCACCCGATTCTCGGCCTCCAACTACTTTGCAGAGG
CCCCCAGTACCGTCCAATGCCCAGCTTATTGAACAGACTGGCTACCGGAA
GGTTGCCCAGCCGGACAGTCTCCATCCGGTTGCATCGCTTGTCAAGAATG
CTGAGCAGCAATTTGATCGGTTACTGTCACGTCAATCGAAGACCTTGGCT
CAGGCTGTCGACGAATATCGAGAGCGCTACAACATGCACCCGCCCCCGCA
TTTTGACAAGTGGTTCCAATTTGCCAAGGATAGAGGGGTTCAGCTGATTG
ATGAATACGATACAATATATCATGCTCTGTTGCCATTTTGGGCGCTCGAA
CCGAAGACTATTCGCGACCGGGCTCGGGAGACGCTGGGCTTCGACAATTC
TATGATCGGGGTACTGATCCGAAATGGGTCTGTGTCACTGGTGGAAGGTG
GAGCATTCGAGCAGGGCTGGCAGCGTAGTGCCACCGCTAAGATGATCAAC
AGTTTTGTCGAGTATCTGCCTGATATGGATCTCGTGTTTAATGCCCTCGA
TGAGCCTCGAGTTGTCGTACCCAGCGAGGATCTTCAGAGGCTGGTTGCAA
TTGCCAGAGATCAAGTCTCTCAGAATACTGTTGTGAATACCATGCCCATA
AATGCATGGTCAGATAGACCCAGCGACTTGAATAAAGGGGACCGCATTGA
TGAAGTGCGTACTACCCGTTTCAACCGATTCACCCGTCAGTCCACATGGA
GTTATTCTCGGTCTTCCTGTCCAGTCGATAGTCCGGTCCGCTCTCTCGAT
GAGCAGGCTGCGGATAACATAAACTCCTATGCTCAAGGCGAGTTAGGATT
CATATACAACACCAGCGCCTTTTCCGACATTTGCAACTCACCTTCCCTCC
GCTACAAGTACGGGTTCTTTGACCGGCCGAACAGGTTTGAAGCTGTACAT
GACTTGTTCCCAGTCTTCTCGCAGAGCAAGATCTCGAGCTACCAGGACAT
CCTGTACCCTAGCCCTTGGTACTGGTCAGACCAGGTACCTTATGAAGAAG
ACAAGGATATGGAGTGGGATGAAAAGGACAGCCGAATGTTCTGGAGAGGC
TCAACAACAGGGGGATACTCCAGAGCTGGGGGCTGGCGGCGACAGCACCG
ACAGTTGTTCGTCGGCAAAGTTAATGCCCTCAACACAGCCAAGATACTGT
CCAAGACCGAAAGTAGCCAATGGAAAACCAGGGGTGTTGGTCGAAACTCC
TTTACCGACCTCTTCGACGTTCGGTTCACGTACATTGGCCAATGTGATGA
TAAGGACTGTGCCGCCCAGGAAGAATATTTTGACTTGGCGGAGCCGGTTG
ATCAGCAAGACGCTTGGGCGTACAAACATCTGTTGGACATGGATGGGAAT
GCCTTCAGTGGTCGGTTCTATGCGTTCTTGCGCAGCAGGAGTCTCGTTCA
TAAGGTCTCAATCTTCCGTGAATGGCATGATGAGTGGCTCAAACCTTGGA
AACATTACGTACCCTTGAGCCTGACCGGAGATGATTATCTGGAGGCCATA
CGATACTTTGAATCCGAAGAAGAGGGCAGAGTGATCGCACCAAGGCTGGC
CCAGCAAGGCCGGGAATGGGCGCAGAAAGCTCTTCGGAGTGAAGACATGG
AGGTCTGGTTCTTCCGACTTTTACTAGAGTAAGTGCACTTTTTTTTATTC
CCTTCTTTACCCCGTGATTTCTAATACTAAAACACCCATCAGGTACGGGC
GCCTAGTTGACGACAATCGACATAATTTGGGGTTTTCGGTCTAG back to topCoding sequence (CDS) from alignment at ACJE01000020.1:1066215..1068108- >ASPNIDRAFT_42889-T1 ID=ASPNIDRAFT_42889-T1|Name=ASPNIDRAFT_42889-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3660bp|location=Sequence derived from alignment at ACJE01000020.1:1066215..1068108- (Aspergillus niger ATCC 1015)
GTACGGGCGCCTAGTTGACGACAATCGACATAATTTGGGGTTTTCGGTCT
AGATGCGAACCCAACGATTTGTGGTCTGGCTAGGCACCTTTGCCCTCATC
TCATTATGTCTCATTCTTTTCAGAAGTTCCAGTCCTTCACCCTCACCTAT
TGTGGACCTCTATCCTTCACCCGATTCTCGGCCTCCAACTACTTTGCAGA
GGCCCCCAGTACCGTCCAATGCCCAGCTTATTGAACAGACTGGCTACCGG
AAGGTTGCCCAGCCGGACAGTCTCCATCCGGTTGCATCGCTTGTCAAGAA
TGCTGAGCAGCAATTTGATCGGTTACTGTCACGTCAATCGAAGACCTTGG
CTCAGGCTGTCGACGAATATCGAGAGCGCTACAACATGCACCCGCCCCCG
CATTTTGACAAGTGGTTCCAATTTGCCAAGGATAGAGGGGTTCAGCTGAT
TGATGAATACGATACAATATATCATGCTCTGTTGCCATTTTGGGCGCTCG
AACCGAAGACTATTCGCGACCGGGCTCGGGAGACGCTGGGCTTCGACAAT
TCTATGATCGGGGTACTGATCCGAAATGGGTCTGTGTCACTGGTGGAAGG
TGGAGCATTCGAGCAGGGCTGGCAGCGTAGTGCCACCGCTAAGATGATCA
ACAGTTTTGTCGAGTATCTGCCTGATATGGATCTCGTGTTTAATGCCCTC
GATGAGCCTCGAGTTGTCGTACCCAGCGAGGATCTTCAGAGGCTGGTTGC
AATTGCCAGAGATCAAGTCTCTCAGAATACTGTTGTGAATACCATGCCCA
TAAATGCATGGTCAGATAGACCCAGCGACTTGAATAAAGGGGACCGCATT
GATGAAGTGCGTACTACCCGTTTCAACCGATTCACCCGTCAGTCCACATG
GAGTTATTCTCGGTCTTCCTGTCCAGTCGATAGTCCGGTCCGCTCTCTCG
ATGAGCAGGCTGCGGATAACATAAACTCCTATGCTCAAGGCGAGTTAGGA
TTCATATACAACACCAGCGCCTTTTCCGACATTTGCAACTCACCTTCCCT
CCGCTACAAGTACGGGTTCTTTGACCGGCCGAACAGGTTTGAAGCTGTAC
ATGACTTGTTCCCAGTCTTCTCGCAGAGCAAGATCTCGAGCTACCAGGAC
ATCCTGTACCCTAGCCCTTGGTACTGGTCAGACCAGGTACCTTATGAAGA
AGACAAGGATATGGAGTGGGATGAAAAGGACAGCCGAATGTTCTGGAGAG
GCTCAACAACAGGGGGATACTCCAGAGCTGGGGGCTGGCGGCGACAGCAC
CGACAGTTGTTCGTCGGCAAAGTTAATGCCCTCAACACAGCCAAGATACT
GTCCAAGACCGAAAGTAGCCAATGGAAAACCAGGGGTGTTGGTCGAAACT
CCTTTACCGACCTCTTCGACGTTCGGTTCACGTACATTGGCCAATGTGAT
GATAAGGACTGTGCCGCCCAGGAAGAATATTTTGACTTGGCGGAGCCGGT
TGATCAGCAAGACGCTTGGGCGTACAAACATCTGTTGGACATGGATGGGA
ATGCCTTCAGTGGTCGGTTCTATGCGTTCTTGCGCAGCAGGAGTCTCGTT
CATAAGGTCTCAATCTTCCGTGAATGGCATGATGAGTGGCTCAAACCTTG
GAAACATTACGTACCCTTGAGCCTGACCGGAGATGATTATCTGGAGGCCA
TACGATACTTTGAATCCGAAGAAGAGGGCAGAGTGATCGCACCAAGGCTG
GCCCAGCAAGGCCGGGAATGGGCGCAGAAAGCTCTTCGGAGTGAAGACAT
GGAGGTCTGGTTCTTCCGACTTTTACTAGAGTACGGGCGCCTAGTTGACG
ACAATCGACATAATTTGGGGTTTTCGGTCTAGATGCGAACCCAACGATTT
GTGGTCTGGCTAGGCACCTTTGCCCTCATCTCATTATGTCTCATTCTTTT
CAGAAGTTCCAGTCCTTCACCCTCACCTATTGTGGACCTCTATCCTTCAC
CCGATTCTCGGCCTCCAACTACTTTGCAGAGGCCCCCAGTACCGTCCAAT
GCCCAGCTTATTGAACAGACTGGCTACCGGAAGGTTGCCCAGCCGGACAG
TCTCCATCCGGTTGCATCGCTTGTCAAGAATGCTGAGCAGCAATTTGATC
GGTTACTGTCACGTCAATCGAAGACCTTGGCTCAGGCTGTCGACGAATAT
CGAGAGCGCTACAACATGCACCCGCCCCCGCATTTTGACAAGTGGTTCCA
ATTTGCCAAGGATAGAGGGGTTCAGCTGATTGATGAATACGATACAATAT
ATCATGCTCTGTTGCCATTTTGGGCGCTCGAACCGAAGACTATTCGCGAC
CGGGCTCGGGAGACGCTGGGCTTCGACAATTCTATGATCGGGGTACTGAT
CCGAAATGGGTCTGTGTCACTGGTGGAAGGTGGAGCATTCGAGCAGGGCT
GGCAGCGTAGTGCCACCGCTAAGATGATCAACAGTTTTGTCGAGTATCTG
CCTGATATGGATCTCGTGTTTAATGCCCTCGATGAGCCTCGAGTTGTCGT
ACCCAGCGAGGATCTTCAGAGGCTGGTTGCAATTGCCAGAGATCAAGTCT
CTCAGAATACTGTTGTGAATACCATGCCCATAAATGCATGGTCAGATAGA
CCCAGCGACTTGAATAAAGGGGACCGCATTGATGAAGTGCGTACTACCCG
TTTCAACCGATTCACCCGTCAGTCCACATGGAGTTATTCTCGGTCTTCCT
GTCCAGTCGATAGTCCGGTCCGCTCTCTCGATGAGCAGGCTGCGGATAAC
ATAAACTCCTATGCTCAAGGCGAGTTAGGATTCATATACAACACCAGCGC
CTTTTCCGACATTTGCAACTCACCTTCCCTCCGCTACAAGTACGGGTTCT
TTGACCGGCCGAACAGGTTTGAAGCTGTACATGACTTGTTCCCAGTCTTC
TCGCAGAGCAAGATCTCGAGCTACCAGGACATCCTGTACCCTAGCCCTTG
GTACTGGTCAGACCAGGTACCTTATGAAGAAGACAAGGATATGGAGTGGG
ATGAAAAGGACAGCCGAATGTTCTGGAGAGGCTCAACAACAGGGGGATAC
TCCAGAGCTGGGGGCTGGCGGCGACAGCACCGACAGTTGTTCGTCGGCAA
AGTTAATGCCCTCAACACAGCCAAGATACTGTCCAAGACCGAAAGTAGCC
AATGGAAAACCAGGGGTGTTGGTCGAAACTCCTTTACCGACCTCTTCGAC
GTTCGGTTCACGTACATTGGCCAATGTGATGATAAGGACTGTGCCGCCCA
GGAAGAATATTTTGACTTGGCGGAGCCGGTTGATCAGCAAGACGCTTGGG
CGTACAAACATCTGTTGGACATGGATGGGAATGCCTTCAGTGGTCGGTTC
TATGCGTTCTTGCGCAGCAGGAGTCTCGTTCATAAGGTCTCAATCTTCCG
TGAATGGCATGATGAGTGGCTCAAACCTTGGAAACATTACGTACCCTTGA
GCCTGACCGGAGATGATTATCTGGAGGCCATACGATACTTTGAATCCGAA
GAAGAGGGCAGAGTGATCGCACCAAGGCTGGCCCAGCAAGGCCGGGAATG
GGCGCAGAAAGCTCTTCGGAGTGAAGACATGGAGGTCTGGTTCTTCCGAC
TTTTACTAGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-28) |
| DBxref | InterPro:IPR006598 |
| DBxref | PFAM:PF05686 |
| Product | lipopolysaccharide-modifying enzyme |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000020.1 | supercontig | ACJE01000020.1:1066215..1068108 - |
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