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ASPNIDRAFT_43012-T1, ASPNIDRAFT_43012-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_43012-T1
Unique NameASPNIDRAFT_43012-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000020.1:1449959..1450858+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_43012-T1 ID=ASPNIDRAFT_43012-T1|Name=ASPNIDRAFT_43012-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=900bp|location=Sequence derived from alignment at ACJE01000020.1:1449959..1450858+ (Aspergillus niger ATCC 1015)
ATGCATGAGCTTCTGCTCTTCGCCTCGGTTCCCGCGCACCAGCATCATGA GCTTCTTCAACAGCTGGCCGGGTTGACGGCCATGCAACCCCGTCACCGCC TGGAAAGACGCTTGGTTTTCAAGGCCTACCGCAAGCCAGGCTTGACCAAC ACCCGGGTTGGGGCCAGTCAAGATCTGCAGGGTGTCGAATTGCAGCGCCT TAATAAGATGCTCAATGGAGGCATGTTCTATACCCAAGTAGTCGGTCCCG TGGCCAAAGCCGACTTTGGCGGGAACCCTTCCTCGTCGGGAGATCCAGAT GTCTCCATGTCCGGATTGGAGGAGAAGCCATCGTCATCTTCGTCTTCTTA CAGTTATGAGGATCAGCCCTGGAAACTCGAATTTAGAGATATCCCCGAGG CAGGCACTCGATCCGCGGTAACTGCTCGGCTGATGGCTAGTGCCACGCTG CCTAAAGGTGATATCACGGCGCCCATGAATGCCTGGGGTTATAGGTTAGT AGCTTCCCATGCCATTCGGTGTTATATCAGCTCCTCCATATCTTGATTGG TCCTAGTCGGCTGACAAACTGGGTTCAGCTTTGTCACTGAGTACGTGGTG GAAGGAGATGTCTTTGTTCTCAATGACATCGTTATCTTCCTACACCGTGT CCTGCTTTACCCGACTGGGGCGCAGGAATCACATGGACCTCGTCGGCAGC TGCCTGCGTATCAGGAGCTCTCACCGCTGGAACGGACAGGGAGCTATGTC CTGCAAGCTGCTATCACCGTCCAGGATGGCGGGAATCAGGAGATGATGAG GACGGCTTCGCAGCATTTGTTCGGGCTTCGCGAGCAGCTCAAGTCGGCTG TCCGTCTAGAAATGGCGGACCGGCTGTCTCTGGATACGCGAGCGAAGTAA
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Coding sequence (CDS) from alignment at ACJE01000020.1:1449959..1450858+

>ASPNIDRAFT_43012-T1 ID=ASPNIDRAFT_43012-T1|Name=ASPNIDRAFT_43012-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1632bp|location=Sequence derived from alignment at ACJE01000020.1:1449959..1450858+ (Aspergillus niger ATCC 1015)
ATGCATGAGCTTCTGCTCTTCGCCTCGGTTCCCGCGCACCAGCATCATGA
GCTTCTTCAACAGCTGGCCGGGTTGACGGCCATGCAACCCCGTCACCGCC
TGGAAAGACGCTTGGTTTTCAAGGCCTACCGCAAGCCAGGCTTGACCAAC
ACCCGGGTTGGGGCCAGTCAAGATCTGCAGGGTGTCGAATTGCAGCGCCT
TAATAAGATGCTCAATGGAGGCATGTTCTATACCCAAGTAGTCGGTCCCG
TGGCCAAAGCCGACTTTGGCGGGAACCCTTCCTCGTCGGGAGATCCAGAT
GTCTCCATGTCCGGATTGGAGGAGAAGCCATCGTCATCTTCGTCTTCTTA
CAGTTATGAGGATCAGCCCTGGAAACTCGAATTTAGAGATATCCCCGAGG
CAGGCACTCGATCCGCGGTAACTGCTCGGCTGATGGCTAGTGCCACGCTG
CCTAAAGGTGATATCACGGCGCCCATGAATGCCTGGGGTTATAGCTTTGT
CACTGAGTACGTGGTGGAAGGAGATGTCTTTGTTCTCAATGACATCGTTA
TCTTCCTACACCGTGTCCTGCTTTACCCGACTGGGGCGCAGGAATCACAT
GGACCTCGTCGGCAGCTGCCTGCGTATCAGGAGCTCTCACCGCTGGAACG
GACAGGGAGCTATGTCCTGCAAGCTGCTATCACCGTCCAGGATGGCGGGA
ATCAGGAGATGATGAGGACGGCTTCGCAGCATTTGTTCGGGCTTCGCGAG
CAGCTCAAGTCGGCTGTCCGTCTAGAAATGGCGGACCGGCTGTCTCTGGA
TACGCGAGCGAAGTAAATGCATGAGCTTCTGCTCTTCGCCTCGGTTCCCG
CGCACCAGCATCATGAGCTTCTTCAACAGCTGGCCGGGTTGACGGCCATG
CAACCCCGTCACCGCCTGGAAAGACGCTTGGTTTTCAAGGCCTACCGCAA
GCCAGGCTTGACCAACACCCGGGTTGGGGCCAGTCAAGATCTGCAGGGTG
TCGAATTGCAGCGCCTTAATAAGATGCTCAATGGAGGCATGTTCTATACC
CAAGTAGTCGGTCCCGTGGCCAAAGCCGACTTTGGCGGGAACCCTTCCTC
GTCGGGAGATCCAGATGTCTCCATGTCCGGATTGGAGGAGAAGCCATCGT
CATCTTCGTCTTCTTACAGTTATGAGGATCAGCCCTGGAAACTCGAATTT
AGAGATATCCCCGAGGCAGGCACTCGATCCGCGGTAACTGCTCGGCTGAT
GGCTAGTGCCACGCTGCCTAAAGGTGATATCACGGCGCCCATGAATGCCT
GGGGTTATAGCTTTGTCACTGAGTACGTGGTGGAAGGAGATGTCTTTGTT
CTCAATGACATCGTTATCTTCCTACACCGTGTCCTGCTTTACCCGACTGG
GGCGCAGGAATCACATGGACCTCGTCGGCAGCTGCCTGCGTATCAGGAGC
TCTCACCGCTGGAACGGACAGGGAGCTATGTCCTGCAAGCTGCTATCACC
GTCCAGGATGGCGGGAATCAGGAGATGATGAGGACGGCTTCGCAGCATTT
GTTCGGGCTTCGCGAGCAGCTCAAGTCGGCTGTCCGTCTAGAAATGGCGG
ACCGGCTGTCTCTGGATACGCGAGCGAAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016592mediator complex
Vocabulary: Biological Process
TermDefinition
GO:0006357regulation of transcription by RNA polymerase II
Vocabulary: Molecular Function
TermDefinition
GO:0003712transcription coregulator activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SRB5ASPNIDRAFT_43012Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_43012-T1.exon1ASPNIDRAFT_43012-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_43012-T1.exon2ASPNIDRAFT_43012-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_43012-T1.cdsASPNIDRAFT_43012-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_43012-T1ASPNIDRAFT_43012-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR019095
DBxrefPFAM:PF09637
ProductMediator of RNA polymerase II transcription subunit 18
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000020.1supercontigACJE01000020.1:1449959..1450858 +