You are here

Home

ASPNIDRAFT_43122-T1, ASPNIDRAFT_43122-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_43122-T1
Unique NameASPNIDRAFT_43122-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000001.1:1472726..1473592-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_43122-T1 ID=ASPNIDRAFT_43122-T1|Name=ASPNIDRAFT_43122-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=867bp|location=Sequence derived from alignment at ACJE01000001.1:1472726..1473592- (Aspergillus niger ATCC 1015)
ATGAAAAAGCGCAAGGTTCTCGAGTCGTTGCAGGCCGGCCCTAAGAAGAA
GTTCAGAAAGCAGCGCGAATACCACAGCAGCTCCGAAGAAGAGTCCGAAG
CCGATGAACCTACCGATTTCAAGGCTGTCAGCTTGGCAGACTCTGACGCT
GAAGATGAAGTCCAAGTGAAGAAGCCCAAGAAGCAGACCAAGGCGATCGG
CGCCTCTACGAAGAGAAAAGCGGAGGAGAAAGACGAAAGCTCCGACGAGG
AGGTAGCCGACGATGACGAGGACGACGAGGAGGATGGTGATGTTGAGTCT
GAAATCGACTCTGAAGGATCCGACGATGAAGAAGGTGCCGACTCCGATAC
TTCTGCACCTGCGACAACGGGTCGCAGAGCTGTCTCTAAGCGCAATGATC
CCTCGGCCTTCTCTACCTCTATCGCAAAAATTCTGTCCACCAAACTCCCC
ACATCCGTTCGAGACGATCCCGTGCTGGCGCGCAGCAAAGCCGCTGCCCA
GAAGAGCACCGACGTTGCAGAGGAGAAGCTGGATCGGCAAGCGCGGGCCA
AGCTTCGTGCGGAGAAGAAGGAAGAGCTGGACCGTGGTCGTATTCGCGAT
GTCATGGGTCTTCAGCGTGGTCAGGCGGGTGCGGTTGCGGAGGAGGAGAA
GCGTCTGCGCAAGATTGCCCAGCGTGGTGTGGTGAAGCTGTTCAATGCCG
TCCGCGCCGCCCAGGTGCGCGGAGAGGAAGCAGCCAAGGCAGAGCGCAAG
AAGGGTACCGTTGGTATTGACGAGCGCGAGAAGGCCGTGAACGAAGTCAG
CAAGCAGGGATTCTTGGACTTGATTAGCGGGAAGAAGGGCAAGGCGTTGA
AGATTGAGGAGGCTTAA
back to top

Coding sequence (CDS) from alignment at ACJE01000001.1:1472726..1473592-

>ASPNIDRAFT_43122-T1 ID=ASPNIDRAFT_43122-T1|Name=ASPNIDRAFT_43122-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=867bp|location=Sequence derived from alignment at ACJE01000001.1:1472726..1473592- (Aspergillus niger ATCC 1015)
ATGAAAAAGCGCAAGGTTCTCGAGTCGTTGCAGGCCGGCCCTAAGAAGAA
GTTCAGAAAGCAGCGCGAATACCACAGCAGCTCCGAAGAAGAGTCCGAAG
CCGATGAACCTACCGATTTCAAGGCTGTCAGCTTGGCAGACTCTGACGCT
GAAGATGAAGTCCAAGTGAAGAAGCCCAAGAAGCAGACCAAGGCGATCGG
CGCCTCTACGAAGAGAAAAGCGGAGGAGAAAGACGAAAGCTCCGACGAGG
AGGTAGCCGACGATGACGAGGACGACGAGGAGGATGGTGATGTTGAGTCT
GAAATCGACTCTGAAGGATCCGACGATGAAGAAGGTGCCGACTCCGATAC
TTCTGCACCTGCGACAACGGGTCGCAGAGCTGTCTCTAAGCGCAATGATC
CCTCGGCCTTCTCTACCTCTATCGCAAAAATTCTGTCCACCAAACTCCCC
ACATCCGTTCGAGACGATCCCGTGCTGGCGCGCAGCAAAGCCGCTGCCCA
GAAGAGCACCGACGTTGCAGAGGAGAAGCTGGATCGGCAAGCGCGGGCCA
AGCTTCGTGCGGAGAAGAAGGAAGAGCTGGACCGTGGTCGTATTCGCGAT
GTCATGGGTCTTCAGCGTGGTCAGGCGGGTGCGGTTGCGGAGGAGGAGAA
GCGTCTGCGCAAGATTGCCCAGCGTGGTGTGGTGAAGCTGTTCAATGCCG
TCCGCGCCGCCCAGGTGCGCGGAGAGGAAGCAGCCAAGGCAGAGCGCAAG
AAGGGTACCGTTGGTATTGACGAGCGCGAGAAGGCCGTGAACGAAGTCAG
CAAGCAGGGATTCTTGGACTTGATTAGCGGGAAGAAGGGCAAGGCGTTGA
AGATTGAGGAGGCTTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_43122ASPNIDRAFT_43122Aspergillus niger ATCC 1015gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_43122-T1.cdsASPNIDRAFT_43122-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_43122-T1.exon1ASPNIDRAFT_43122-T1.exon1Aspergillus niger ATCC 1015exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_43122-T1ASPNIDRAFT_43122-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092653LT
DBxrefInterPro:IPR012459
DBxrefPFAM:PF07890
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000001.1supercontigACJE01000001.1:1472726..1473592 -
Powered by Drupal