|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000001.1:242508..244454+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_43524-T1 ID=ASPNIDRAFT_43524-T1|Name=ASPNIDRAFT_43524-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1947bp|location=Sequence derived from alignment at ACJE01000001.1:242508..244454+ (Aspergillus niger ATCC 1015)
ATGGCCTTCTTCTCGGATAGCCATATCCACTCCCTTACCACTATATTGGG
CCACAGCAGACTGAGAGACCTTCTCGATGCCATGGGGGAAGCGATGCATC
AGCATGCACATGGCATTGACATAGATTTCAGCGCTCCCGACCCACCAGTT
CGAATCCCCCATGAGGAGGCTGCTCATTATATCACAGGTCAGACACACAT
GTCTTTTTTCGTGTGGGTCCGTTTTTTGACACAAACTTCCAGTGTATTTC
GATGACTTGCACCCCTTAGCACCATTCCTGGACCGAGCCGACTTTGAACG
GAGAGTCTCAGACCCAGGATTATCGGAGTTACTGGAAAACAATGCGCCAT
TCTGTGCACTATACCATACTCTGCTAGCACTAGGGTGCCAGTATATGGAT
GGTGGCTCTTTCACTCCAGGGGAGGGTAAAGCATGGAAATATTTTCAGTG
CGCATTGAGCCTCTTCCCAAAGATACTTGCCCCACCCCAAGGTTTACTTC
ATGTCCAAGTATGTTTATTCCACCCTAGTTTGGATTCTAGCTGACAGTCG
AACCAGGCACTAGCAGCCATGGTGAGTAGAGAAAGTAGTGGATCATTGTA
TCATTCTGCTAAATCAAGTTTTAGGGAATTTTCACAATGAGCTTTTCTTG
TATACCTATCGGTGAAACTTTGATTTCCGAGGCCGCGAGAATAGTTCAGT
TGCTGGGATACAACGCCGCATACGTGCAAACGGAGGATGAAAGATCATGC
CACAGAGCTTTCTGGGTTATATATTGGCTGGAAAAAGTCACCTCGTTTTT
CCGAGGGCGTGGTTCGGTAAGGGTACCTACATCTTCGTGCCTGGCATGGC
TAATCAGAGATGTAGATGATACCCGATTATGACATAGGCTGTCCCGTTCC
GGGACCCCCCGATACTGTTCCTGGACAGCTTGATTGGCTATTAACGACAG
CACGCCTAGGTCGGCTGATGTCTCGCACTTACGAATGTCTCTTCTCTGTG
AGTGCGGTTCAGATGCATACAGGTGCCCGTATCGCAGCTATAGACTCGAT
GTCGCGCGAGCTAGAAGCGTGGAATCGCACCCTTCCGGAACCCTATCAGC
CCGGGGATTCAATTCGCTTTTCTAAAAGCAAGAACCCCTGCGCGCAAGAT
ATGGCGCTACAAATACGATTTATATATTATGCATTGGTTATGTCTATGTG
TCGGCTTCGAATCCATCTTATGGTTGACCAACCGAGTGAGACAAACCAAG
AGACCAAGCGTCAACTGATGGAGGCCGCCCGAGCTGTTATATACCATACG
CGGTATATTGAGCATGAAGCGCATGTCCCAGTCTGGTAAGAGGTCCCATT
CGGGGCCATGTTTCCACCGACACTAATCGTAACAGGCAACTCGGCATCGT
GCCTATCTCGGCTCTTTTTGTTATCTTTGACTTTGTTATCCACAACCCGC
TCCACAAGGAGACGGCCACCAATATCTCGTTCCTGGACATAGCAGCCGGT
TATTTTAGCCGTTGGGAAATCAGCAAAAAAGATTCTCTTCCAGCATCAAG
TGTTGCTGAATTTTCTCACATTGCCCGTCAATTTGTGCGGGATGTACAAG
CCAGGTCACAGACCATCGGCTCGCGACGGACTTCGCACCTCGAGTCAGAT
AATATTGGGCCAATGACTGGCGGAAAGAACGACGCGTCCGGTTTTCCTAT
GCAGCCAAGTCACGTCATGGTAGGTTCCAGTTATGAACCCCCTTCCATAT
CACTTGCTGATATTGCTCCTGTAAAGAATGAGGAACCCCTCGTTCTTCCG
GACATTGAAGGTTCATCGGCCATTGGCCCAGACCAACTATTCTATCCTGA
AGATCCACTTCAAACCTTATTAGGGACCTACTTGCCGCCGACGACCGACT
TATCTAATATGTTCAACTCTGCTTTGTGGTATCCAGGATCACTGTAA back to topCoding sequence (CDS) from alignment at ACJE01000001.1:242508..244454+ >ASPNIDRAFT_43524-T1 ID=ASPNIDRAFT_43524-T1|Name=ASPNIDRAFT_43524-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=8385bp|location=Sequence derived from alignment at ACJE01000001.1:242508..244454+ (Aspergillus niger ATCC 1015)
ATGGCCTTCTTCTCGGATAGCCATATCCACTCCCTTACCACTATATTGGG
CCACAGCAGACTGAGAGACCTTCTCGATGCCATGGGGGAAGCGATGCATC
AGCATGCACATGGCATTGACATAGATTTCAGCGCTCCCGACCCACCAGTT
CGAATCCCCCATGAGGAGGCTGCTCATTATATCACAGTGTATTTCGATGA
CTTGCACCCCTTAGCACCATTCCTGGACCGAGCCGACTTTGAACGGAGAG
TCTCAGACCCAGGATTATCGGAGTTACTGGAAAACAATGCGCCATTCTGT
GCACTATACCATACTCTGCTAGCACTAGGGTGCCAGTATATGGATGGTGG
CTCTTTCACTCCAGGGGAGGGTAAAGCATGGAAATATTTTCAGTGCGCAT
TGAGCCTCTTCCCAAAGATACTTGCCCCACCCCAAGGTTTACTTCATGTC
CAAGGAATTTTCACAATGAGCTTTTCTTGTATACCTATCGGTGAAACTTT
GATTTCCGAGGCCGCGAGAATAGTTCAGTTGCTGGGATACAACGCCGCAT
ACGTGCAAACGGAGGATGAAAGATCATGCCACAGAGCTTTCTGGGTTATA
TATTGGCTGGAAAAAGTCACCTCGTTTTTCCGAGGGCGTGGTTCGATGAT
ACCCGATTATGACATAGGCTGTCCCGTTCCGGGACCCCCCGATACTGTTC
CTGGACAGCTTGATTGGCTATTAACGACAGCACGCCTAGGTCGGCTGATG
TCTCGCACTTACGAATGTCTCTTCTCTGTGAGTGCGGTTCAGATGCATAC
AGGTGCCCGTATCGCAGCTATAGACTCGATGTCGCGCGAGCTAGAAGCGT
GGAATCGCACCCTTCCGGAACCCTATCAGCCCGGGGATTCAATTCGCTTT
TCTAAAAGCAAGAACCCCTGCGCGCAAGATATGGCGCTACAAATACGATT
TATATATTATGCATTGGTTATGTCTATGTGTCGGCTTCGAATCCATCTTA
TGGTTGACCAACCGAGTGAGACAAACCAAGAGACCAAGCGTCAACTGATG
GAGGCCGCCCGAGCTGTTATATACCATACGCGGTATATTGAGCATGAAGC
GCATGTCCCAGTCTGGCAACTCGGCATCGTGCCTATCTCGGCTCTTTTTG
TTATCTTTGACTTTGTTATCCACAACCCGCTCCACAAGGAGACGGCCACC
AATATCTCGTTCCTGGACATAGCAGCCGGTTATTTTAGCCGTTGGGAAAT
CAGCAAAAAAGATTCTCTTCCAGCATCAAGTGTTGCTGAATTTTCTCACA
TTGCCCGTCAATTTGTGCGGGATGTACAAGCCAGGTCACAGACCATCGGC
TCGCGACGGACTTCGCACCTCGAGTCAGATAATATTGGGCCAATGACTGG
CGGAAAGAACGACGCGTCCGGTTTTCCTATGCAGCCAAGTCACGTCATGG
TAGGTTCCAGTTATGAACCCCCTTCCATATCACTTGCTGATATTGCTCCT
GTAAAGAATGAGGAACCCCTCGTTCTTCCGGACATTGAAGGTTCATCGGC
CATTGGCCCAGACCAACTATTCTATCCTGAAGATCCACTTCAAACCTTAT
TAGGGACCTACTTGCCGCCGACGACCGACTTATCTAATATGTTCAACTCT
GCTTTGTGGTATCCAGGATCACTGTAAATGGCCTTCTTCTCGGATAGCCA
TATCCACTCCCTTACCACTATATTGGGCCACAGCAGACTGAGAGACCTTC
TCGATGCCATGGGGGAAGCGATGCATCAGCATGCACATGGCATTGACATA
GATTTCAGCGCTCCCGACCCACCAGTTCGAATCCCCCATGAGGAGGCTGC
TCATTATATCACAGTGTATTTCGATGACTTGCACCCCTTAGCACCATTCC
TGGACCGAGCCGACTTTGAACGGAGAGTCTCAGACCCAGGATTATCGGAG
TTACTGGAAAACAATGCGCCATTCTGTGCACTATACCATACTCTGCTAGC
ACTAGGGTGCCAGTATATGGATGGTGGCTCTTTCACTCCAGGGGAGGGTA
AAGCATGGAAATATTTTCAGTGCGCATTGAGCCTCTTCCCAAAGATACTT
GCCCCACCCCAAGGTTTACTTCATGTCCAAGGAATTTTCACAATGAGCTT
TTCTTGTATACCTATCGGTGAAACTTTGATTTCCGAGGCCGCGAGAATAG
TTCAGTTGCTGGGATACAACGCCGCATACGTGCAAACGGAGGATGAAAGA
TCATGCCACAGAGCTTTCTGGGTTATATATTGGCTGGAAAAAGTCACCTC
GTTTTTCCGAGGGCGTGGTTCGATGATACCCGATTATGACATAGGCTGTC
CCGTTCCGGGACCCCCCGATACTGTTCCTGGACAGCTTGATTGGCTATTA
ACGACAGCACGCCTAGGTCGGCTGATGTCTCGCACTTACGAATGTCTCTT
CTCTGTGAGTGCGGTTCAGATGCATACAGGTGCCCGTATCGCAGCTATAG
ACTCGATGTCGCGCGAGCTAGAAGCGTGGAATCGCACCCTTCCGGAACCC
TATCAGCCCGGGGATTCAATTCGCTTTTCTAAAAGCAAGAACCCCTGCGC
GCAAGATATGGCGCTACAAATACGATTTATATATTATGCATTGGTTATGT
CTATGTGTCGGCTTCGAATCCATCTTATGGTTGACCAACCGAGTGAGACA
AACCAAGAGACCAAGCGTCAACTGATGGAGGCCGCCCGAGCTGTTATATA
CCATACGCGGTATATTGAGCATGAAGCGCATGTCCCAGTCTGGCAACTCG
GCATCGTGCCTATCTCGGCTCTTTTTGTTATCTTTGACTTTGTTATCCAC
AACCCGCTCCACAAGGAGACGGCCACCAATATCTCGTTCCTGGACATAGC
AGCCGGTTATTTTAGCCGTTGGGAAATCAGCAAAAAAGATTCTCTTCCAG
CATCAAGTGTTGCTGAATTTTCTCACATTGCCCGTCAATTTGTGCGGGAT
GTACAAGCCAGGTCACAGACCATCGGCTCGCGACGGACTTCGCACCTCGA
GTCAGATAATATTGGGCCAATGACTGGCGGAAAGAACGACGCGTCCGGTT
TTCCTATGCAGCCAAGTCACGTCATGGTAGGTTCCAGTTATGAACCCCCT
TCCATATCACTTGCTGATATTGCTCCTGTAAAGAATGAGGAACCCCTCGT
TCTTCCGGACATTGAAGGTTCATCGGCCATTGGCCCAGACCAACTATTCT
ATCCTGAAGATCCACTTCAAACCTTATTAGGGACCTACTTGCCGCCGACG
ACCGACTTATCTAATATGTTCAACTCTGCTTTGTGGTATCCAGGATCACT
GTAAATGGCCTTCTTCTCGGATAGCCATATCCACTCCCTTACCACTATAT
TGGGCCACAGCAGACTGAGAGACCTTCTCGATGCCATGGGGGAAGCGATG
CATCAGCATGCACATGGCATTGACATAGATTTCAGCGCTCCCGACCCACC
AGTTCGAATCCCCCATGAGGAGGCTGCTCATTATATCACAGTGTATTTCG
ATGACTTGCACCCCTTAGCACCATTCCTGGACCGAGCCGACTTTGAACGG
AGAGTCTCAGACCCAGGATTATCGGAGTTACTGGAAAACAATGCGCCATT
CTGTGCACTATACCATACTCTGCTAGCACTAGGGTGCCAGTATATGGATG
GTGGCTCTTTCACTCCAGGGGAGGGTAAAGCATGGAAATATTTTCAGTGC
GCATTGAGCCTCTTCCCAAAGATACTTGCCCCACCCCAAGGTTTACTTCA
TGTCCAAGGAATTTTCACAATGAGCTTTTCTTGTATACCTATCGGTGAAA
CTTTGATTTCCGAGGCCGCGAGAATAGTTCAGTTGCTGGGATACAACGCC
GCATACGTGCAAACGGAGGATGAAAGATCATGCCACAGAGCTTTCTGGGT
TATATATTGGCTGGAAAAAGTCACCTCGTTTTTCCGAGGGCGTGGTTCGA
TGATACCCGATTATGACATAGGCTGTCCCGTTCCGGGACCCCCCGATACT
GTTCCTGGACAGCTTGATTGGCTATTAACGACAGCACGCCTAGGTCGGCT
GATGTCTCGCACTTACGAATGTCTCTTCTCTGTGAGTGCGGTTCAGATGC
ATACAGGTGCCCGTATCGCAGCTATAGACTCGATGTCGCGCGAGCTAGAA
GCGTGGAATCGCACCCTTCCGGAACCCTATCAGCCCGGGGATTCAATTCG
CTTTTCTAAAAGCAAGAACCCCTGCGCGCAAGATATGGCGCTACAAATAC
GATTTATATATTATGCATTGGTTATGTCTATGTGTCGGCTTCGAATCCAT
CTTATGGTTGACCAACCGAGTGAGACAAACCAAGAGACCAAGCGTCAACT
GATGGAGGCCGCCCGAGCTGTTATATACCATACGCGGTATATTGAGCATG
AAGCGCATGTCCCAGTCTGGCAACTCGGCATCGTGCCTATCTCGGCTCTT
TTTGTTATCTTTGACTTTGTTATCCACAACCCGCTCCACAAGGAGACGGC
CACCAATATCTCGTTCCTGGACATAGCAGCCGGTTATTTTAGCCGTTGGG
AAATCAGCAAAAAAGATTCTCTTCCAGCATCAAGTGTTGCTGAATTTTCT
CACATTGCCCGTCAATTTGTGCGGGATGTACAAGCCAGGTCACAGACCAT
CGGCTCGCGACGGACTTCGCACCTCGAGTCAGATAATATTGGGCCAATGA
CTGGCGGAAAGAACGACGCGTCCGGTTTTCCTATGCAGCCAAGTCACGTC
ATGGTAGGTTCCAGTTATGAACCCCCTTCCATATCACTTGCTGATATTGC
TCCTGTAAAGAATGAGGAACCCCTCGTTCTTCCGGACATTGAAGGTTCAT
CGGCCATTGGCCCAGACCAACTATTCTATCCTGAAGATCCACTTCAAACC
TTATTAGGGACCTACTTGCCGCCGACGACCGACTTATCTAATATGTTCAA
CTCTGCTTTGTGGTATCCAGGATCACTGTAAATGGCCTTCTTCTCGGATA
GCCATATCCACTCCCTTACCACTATATTGGGCCACAGCAGACTGAGAGAC
CTTCTCGATGCCATGGGGGAAGCGATGCATCAGCATGCACATGGCATTGA
CATAGATTTCAGCGCTCCCGACCCACCAGTTCGAATCCCCCATGAGGAGG
CTGCTCATTATATCACAGTGTATTTCGATGACTTGCACCCCTTAGCACCA
TTCCTGGACCGAGCCGACTTTGAACGGAGAGTCTCAGACCCAGGATTATC
GGAGTTACTGGAAAACAATGCGCCATTCTGTGCACTATACCATACTCTGC
TAGCACTAGGGTGCCAGTATATGGATGGTGGCTCTTTCACTCCAGGGGAG
GGTAAAGCATGGAAATATTTTCAGTGCGCATTGAGCCTCTTCCCAAAGAT
ACTTGCCCCACCCCAAGGTTTACTTCATGTCCAAGGAATTTTCACAATGA
GCTTTTCTTGTATACCTATCGGTGAAACTTTGATTTCCGAGGCCGCGAGA
ATAGTTCAGTTGCTGGGATACAACGCCGCATACGTGCAAACGGAGGATGA
AAGATCATGCCACAGAGCTTTCTGGGTTATATATTGGCTGGAAAAAGTCA
CCTCGTTTTTCCGAGGGCGTGGTTCGATGATACCCGATTATGACATAGGC
TGTCCCGTTCCGGGACCCCCCGATACTGTTCCTGGACAGCTTGATTGGCT
ATTAACGACAGCACGCCTAGGTCGGCTGATGTCTCGCACTTACGAATGTC
TCTTCTCTGTGAGTGCGGTTCAGATGCATACAGGTGCCCGTATCGCAGCT
ATAGACTCGATGTCGCGCGAGCTAGAAGCGTGGAATCGCACCCTTCCGGA
ACCCTATCAGCCCGGGGATTCAATTCGCTTTTCTAAAAGCAAGAACCCCT
GCGCGCAAGATATGGCGCTACAAATACGATTTATATATTATGCATTGGTT
ATGTCTATGTGTCGGCTTCGAATCCATCTTATGGTTGACCAACCGAGTGA
GACAAACCAAGAGACCAAGCGTCAACTGATGGAGGCCGCCCGAGCTGTTA
TATACCATACGCGGTATATTGAGCATGAAGCGCATGTCCCAGTCTGGCAA
CTCGGCATCGTGCCTATCTCGGCTCTTTTTGTTATCTTTGACTTTGTTAT
CCACAACCCGCTCCACAAGGAGACGGCCACCAATATCTCGTTCCTGGACA
TAGCAGCCGGTTATTTTAGCCGTTGGGAAATCAGCAAAAAAGATTCTCTT
CCAGCATCAAGTGTTGCTGAATTTTCTCACATTGCCCGTCAATTTGTGCG
GGATGTACAAGCCAGGTCACAGACCATCGGCTCGCGACGGACTTCGCACC
TCGAGTCAGATAATATTGGGCCAATGACTGGCGGAAAGAACGACGCGTCC
GGTTTTCCTATGCAGCCAAGTCACGTCATGGTAGGTTCCAGTTATGAACC
CCCTTCCATATCACTTGCTGATATTGCTCCTGTAAAGAATGAGGAACCCC
TCGTTCTTCCGGACATTGAAGGTTCATCGGCCATTGGCCCAGACCAACTA
TTCTATCCTGAAGATCCACTTCAAACCTTATTAGGGACCTACTTGCCGCC
GACGACCGACTTATCTAATATGTTCAACTCTGCTTTGTGGTATCCAGGAT
CACTGTAAATGGCCTTCTTCTCGGATAGCCATATCCACTCCCTTACCACT
ATATTGGGCCACAGCAGACTGAGAGACCTTCTCGATGCCATGGGGGAAGC
GATGCATCAGCATGCACATGGCATTGACATAGATTTCAGCGCTCCCGACC
CACCAGTTCGAATCCCCCATGAGGAGGCTGCTCATTATATCACAGTGTAT
TTCGATGACTTGCACCCCTTAGCACCATTCCTGGACCGAGCCGACTTTGA
ACGGAGAGTCTCAGACCCAGGATTATCGGAGTTACTGGAAAACAATGCGC
CATTCTGTGCACTATACCATACTCTGCTAGCACTAGGGTGCCAGTATATG
GATGGTGGCTCTTTCACTCCAGGGGAGGGTAAAGCATGGAAATATTTTCA
GTGCGCATTGAGCCTCTTCCCAAAGATACTTGCCCCACCCCAAGGTTTAC
TTCATGTCCAAGGAATTTTCACAATGAGCTTTTCTTGTATACCTATCGGT
GAAACTTTGATTTCCGAGGCCGCGAGAATAGTTCAGTTGCTGGGATACAA
CGCCGCATACGTGCAAACGGAGGATGAAAGATCATGCCACAGAGCTTTCT
GGGTTATATATTGGCTGGAAAAAGTCACCTCGTTTTTCCGAGGGCGTGGT
TCGATGATACCCGATTATGACATAGGCTGTCCCGTTCCGGGACCCCCCGA
TACTGTTCCTGGACAGCTTGATTGGCTATTAACGACAGCACGCCTAGGTC
GGCTGATGTCTCGCACTTACGAATGTCTCTTCTCTGTGAGTGCGGTTCAG
ATGCATACAGGTGCCCGTATCGCAGCTATAGACTCGATGTCGCGCGAGCT
AGAAGCGTGGAATCGCACCCTTCCGGAACCCTATCAGCCCGGGGATTCAA
TTCGCTTTTCTAAAAGCAAGAACCCCTGCGCGCAAGATATGGCGCTACAA
ATACGATTTATATATTATGCATTGGTTATGTCTATGTGTCGGCTTCGAAT
CCATCTTATGGTTGACCAACCGAGTGAGACAAACCAAGAGACCAAGCGTC
AACTGATGGAGGCCGCCCGAGCTGTTATATACCATACGCGGTATATTGAG
CATGAAGCGCATGTCCCAGTCTGGCAACTCGGCATCGTGCCTATCTCGGC
TCTTTTTGTTATCTTTGACTTTGTTATCCACAACCCGCTCCACAAGGAGA
CGGCCACCAATATCTCGTTCCTGGACATAGCAGCCGGTTATTTTAGCCGT
TGGGAAATCAGCAAAAAAGATTCTCTTCCAGCATCAAGTGTTGCTGAATT
TTCTCACATTGCCCGTCAATTTGTGCGGGATGTACAAGCCAGGTCACAGA
CCATCGGCTCGCGACGGACTTCGCACCTCGAGTCAGATAATATTGGGCCA
ATGACTGGCGGAAAGAACGACGCGTCCGGTTTTCCTATGCAGCCAAGTCA
CGTCATGGTAGGTTCCAGTTATGAACCCCCTTCCATATCACTTGCTGATA
TTGCTCCTGTAAAGAATGAGGAACCCCTCGTTCTTCCGGACATTGAAGGT
TCATCGGCCATTGGCCCAGACCAACTATTCTATCCTGAAGATCCACTTCA
AACCTTATTAGGGACCTACTTGCCGCCGACGACCGACTTATCTAATATGT
TCAACTCTGCTTTGTGGTATCCAGGATCACTGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR007219 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000001.1 | supercontig | ACJE01000001.1:242508..244454 + |
|
