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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000005.1:390821..392069- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_43844-T1 ID=ASPNIDRAFT_43844-T1|Name=ASPNIDRAFT_43844-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1249bp|location=Sequence derived from alignment at ACJE01000005.1:390821..392069- (Aspergillus niger ATCC 1015)
ATGACCGGAAGATCCGTCAATGCGGGGAGCAGCGTTACCCGTTACTATTC
CCGTAACCGGTATAGATATTCTGCCGGCCGGGTTCGGTTTGCTCGTTTAG
CCCTGACTTATTTCCGGGGCATTTGGCAGTCCCTTGATAGTGAGGACCAC
AAAACATCCTTCTTTACATCATTGTTGCCTTTCAGCGGTGCTATCTTTGA
GTGGTGGATCAGCTCACGGTTCACACCCATCACTATGAAAGATCAGATTA
GAACCGTTGCCGTCATTGGCTGCGGTGTCATTGGTGCGAGCTGGGCATGT
CTTTTTCTCTCCCGGGGTTTGAACGTCTTGATTTACGATCCCGCCGAAAG
TGCCTGGGAAACGTTCGAGAATTACCTGCAAGATGCATGGCCTGCCTTGG
CAGCACGCAGTCCCATTGAAGATGCCTGGGCGAAGAACTACAAGTTCATT
GACAACATGGAATTGAGCTTATCAGAAGCCGATTTCATCCAGGAGGTAGC
TCCTGCATTCTTAACGTGCTATGCTCGAGACATCGGCTTTGCTAATGTAT
TGCTAGAACGGACCCGAGCGCCCCGAGTTGAAGCAGGCGCTCATGGAAAA
ACTGGACCAGTATACCAGACCCGGTGTCATAATCTCCTCTTCATCTTCTG
GCCTCCCTGCATCGAGGTTCATTGGAAGATGCCAGAAAGACCCCAGTCGC
ATCCTAGTTGGCCATCCATTCAATCCACCACATCTAGTCCCCCTGGTGGA
AGTTGTCCCTCACCCGGGCACCAGCGCTACCACCATATCTGCGGCCCAAG
CCTTCTACCGGTTTCTCGGGAAGACGCCCATCCTGCTCCACCACGAAGTC
CCAGGGTTCGTAGCCAATCGTCTGCAGGCTGCGATCAACAGCGAAGCATA
CAGCCTTATCAGCCGCGGCATTGTCTCCGCCAAGGATCTCGACACGGCAA
TGACATCAGGTCCGGGCCTTCGATGGGCGTTGACCGGTCCGTTTGTTACA
AATTCGTTGGGTGGGGGAGGAGGGCCGAATGGGTTTGCCCAGCGTGTTGA
ACGACTTGGCCCTGCGGTCCGAGCTTGGGAGGAAGACATGTTGAAGCATC
GGTTCGATTGGAGCGAGGAAAGCGTGTCTGTGCTGAAGAGAGAGGCTCTT
CAATGGCTAGAAACAGTGGATTGGGATGGTTTCAATAGGAAGAGAGATCA
GATGCTGCTGAGATTGCTGGAAGTAACCTCCCACACATCATCGCCCTAA back to topCoding sequence (CDS) from alignment at ACJE01000005.1:390821..392069- >ASPNIDRAFT_43844-T1 ID=ASPNIDRAFT_43844-T1|Name=ASPNIDRAFT_43844-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2376bp|location=Sequence derived from alignment at ACJE01000005.1:390821..392069- (Aspergillus niger ATCC 1015)
AACGGACCCGAGCGCCCCGAGTTGAAGCAGGCGCTCATGGAAAAACTGGA
CCAGTATACCAGACCCGGTGTCATAATCTCCTCTTCATCTTCTGGCCTCC
CTGCATCGAGGTTCATTGGAAGATGCCAGAAAGACCCCAGTCGCATCCTA
GTTGGCCATCCATTCAATCCACCACATCTAGTCCCCCTGGTGGAAGTTGT
CCCTCACCCGGGCACCAGCGCTACCACCATATCTGCGGCCCAAGCCTTCT
ACCGGTTTCTCGGGAAGACGCCCATCCTGCTCCACCACGAAGTCCCAGGG
TTCGTAGCCAATCGTCTGCAGGCTGCGATCAACAGCGAAGCATACAGCCT
TATCAGCCGCGGCATTGTCTCCGCCAAGGATCTCGACACGGCAATGACAT
CAGGTCCGGGCCTTCGATGGGCGTTGACCGGTCCGTTTGTTACAAATTCG
TTGGGTGGGGGAGGAGGGCCGAATGGGTTTGCCCAGCGTGTTGAACGACT
TGGCCCTGCGGTCCGAGCTTGGGAGGAAGACATGTTGAAGCATCGGTTCG
ATTGGAGCGAGGAAAGCGTGTCTGTGCTGAAGAGAGAGGCTCTTCAATGG
CTAGAAACAGTGGATTGGGATGGTTTCAATAGGAAGAGAGATCAGATGCT
GCTGAGATTGCTGGAAGTAACCTCCCACACATCATCGCCCTAAATGACCG
GAAGATCCGTCAATGCGGGGAGCAGCGTTACCCGTTACTATTCCCGTAAC
CGGTATAGATATTCTGCCGGCCGGGTTCGGTTTGCTCGTTTAGCCCTGAC
TTATTTCCGGGGCATTTGGCAGTCCCTTGATAGTGAGGACCACAAAACAT
CCTTCTTTACATCATTGTTGCCTTTCAGCGGTGCTATCTTTGAGTGGTGG
ATCAGCTCACGGTTCACACCCATCACTATGAAAGATCAGATTAGAACCGT
TGCCGTCATTGGCTGCGGTGTCATTGGTGCGAGCTGGGCATGTCTTTTTC
TCTCCCGGGGTTTGAACGTCTTGATTTACGATCCCGCCGAAAGTGCCTGG
GAAACGTTCGAGAATTACCTGCAAGATGCATGGCCTGCCTTGGCAGCACG
CAGTCCCATTGAAGATGCCTGGGCGAAGAACTACAAGTTCATTGACAACA
TGGAATTGAGCTTATCAGAAGCCGATTTCATCCAGGAGAACGGACCCGAG
CGCCCCGAGTTGAAGCAGGCGCTCATGGAAAAACTGGACCAGTATACCAG
ACCCGGTGTCATAATCTCCTCTTCATCTTCTGGCCTCCCTGCATCGAGGT
TCATTGGAAGATGCCAGAAAGACCCCAGTCGCATCCTAGTTGGCCATCCA
TTCAATCCACCACATCTAGTCCCCCTGGTGGAAGTTGTCCCTCACCCGGG
CACCAGCGCTACCACCATATCTGCGGCCCAAGCCTTCTACCGGTTTCTCG
GGAAGACGCCCATCCTGCTCCACCACGAAGTCCCAGGGTTCGTAGCCAAT
CGTCTGCAGGCTGCGATCAACAGCGAAGCATACAGCCTTATCAGCCGCGG
CATTGTCTCCGCCAAGGATCTCGACACGGCAATGACATCAGGTCCGGGCC
TTCGATGGGCGTTGACCGGTCCGTTTGTTACAAATTCGTTGGGTGGGGGA
GGAGGGCCGAATGGGTTTGCCCAGCGTGTTGAACGACTTGGCCCTGCGGT
CCGAGCTTGGGAGGAAGACATGTTGAAGCATCGGTTCGATTGGAGCGAGG
AAAGCGTGTCTGTGCTGAAGAGAGAGGCTCTTCAATGGCTAGAAACAGTG
GATTGGGATGGTTTCAATAGGAAGAGAGATCAGATGCTGCTGAGATTGCT
GGAAGTAACCTCCCACACATCATCGCCCTAAATGACCGGAAGATCCGTCA
ATGCGGGGAGCAGCGTTACCCGTTACTATTCCCGTAACCGGTATAGATAT
TCTGCCGGCCGGGTTCGGTTTGCTCGTTTAGCCCTGACTTATTTCCGGGG
CATTTGGCAGTCCCTTGATAGTGAGGACCACAAAACATCCTTCTTTACAT
CATTGTTGCCTTTCAGCGGTGCTATCTTTGAGTGGTGGATCAGCTCACGG
TTCACACCCATCACTATGAAAGATCAGATTAGAACCGTTGCCGTCATTGG
CTGCGGTGTCATTGGTGCGAGCTGGGCATGTCTTTTTCTCTCCCGGGGTT
TGAACGTCTTGATTTACGATCCCGCCGAAAGTGCCTGGGAAACGTTCGAG
AATTACCTGCAAGATGCATGGCCTGCCTTGGCAGCACGCAGTCCCATTGA
AGATGCCTGGGCGAAGAACTACAAGTTCATTGACAACATGGAATTGAGCT
TATCAGAAGCCGATTTCATCCAGGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
| GO:0006631 | fatty acid metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003857 | 3-hydroxyacyl-CoA dehydrogenase activity |
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR008927 |
| DBxref | InterPro:IPR013328 |
| DBxref | InterPro:IPR006108 |
| DBxref | InterPro:IPR006176 |
| DBxref | PFAM:PF02737 |
| DBxref | PFAM:PF00725 |
| Product | Hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000005.1 | supercontig | ACJE01000005.1:390821..392069 - |
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