You are here

Home

ASPNIDRAFT_43922-T1, ASPNIDRAFT_43922-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_43922-T1
Unique NameASPNIDRAFT_43922-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000005.1:133915..134904+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_43922-T1 ID=ASPNIDRAFT_43922-T1|Name=ASPNIDRAFT_43922-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=990bp|location=Sequence derived from alignment at ACJE01000005.1:133915..134904+ (Aspergillus niger ATCC 1015)
ATGAAAACCTTGCGGGGCGCTATTTATGGCTTCCCCCGACCCCCACCACG
CATCCGCACCAAGCCACTCCAAGTGATCTGTGTAGGCCTACCACGGTCAG
GAACCGAAAGTCTCAGCCGCGCGCTCACCCAACTGGGCTTCAAAACCTAC
CACGGCTGGGACATAGTCTTCGACGAACCGCCATATGCCCAGGGCTGGGC
GCAGCTATCCGAGCGAAAATATTCCGGCACGCAAGGGGCAGGCACTGCCC
CAATCAGTCGCGCTGAGTTCGATGCCCTGCTGGGGCATTGTGATGCAGTG
GTGGACACGGCAGCCGCCATGTTCAGCGTGGAAATGATCCAGGCGTATCC
AGAGGCCAAGGTGATTTTGAATACGCGGCAAGACGTAGATGCCTGGCACC
GCAGCGCCATGAAGACATTAGTTGCAGAGGGTGAAGACCAGTGGATGGTA
TGGTTTTTGCACATCTTCACGGCGGATATGTACTGGCTGTGGAGATTGTA
TTATACGTTCGGGTATCCCGGCATGTTTCGTGGGCGGACGACCAAGGAGG
GGCTTACGAAACATGGGAAGCGGGTATATCAGGAGCATGGGTTGATGATT
CGAGGGTCGGTGCCGGAGGAGAGGCTTCTGGAATGGGATGTTGAAGATGG
ATGGGGTCCTTTGTGTGAGGTAAGTCAAGCTTGGGGGTGTTGATGCTTGG
AAGAGTATCACGGTTGACGTTGTGGACTACAGTTTCTGGGCAAAGATATC
CCCGATGAGCCGTTCCCAAACACGAATAATCCGGCAGCTTTTCGGAAGCA
TATCGAAGATCTGGTGCATCCGAGAGCTAAACGGAGTCTGTATAATTTTG
CATGCTGTGCTACTTCAGCGGGCGTGTTGGTAACTGCTATTGTGTTGGGG
GTGAAGAAGAGACAACTATGGCAAATGTTGATCTCGGAGATACCGGTAGT
TATGGGGCAATGCTTGGAATCATTATCACGTTCCAAGTAG
back to top

Coding sequence (CDS) from alignment at ACJE01000005.1:133915..134904+

>ASPNIDRAFT_43922-T1 ID=ASPNIDRAFT_43922-T1|Name=ASPNIDRAFT_43922-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1854bp|location=Sequence derived from alignment at ACJE01000005.1:133915..134904+ (Aspergillus niger ATCC 1015)
ATGAAAACCTTGCGGGGCGCTATTTATGGCTTCCCCCGACCCCCACCACG
CATCCGCACCAAGCCACTCCAAGTGATCTGTGTAGGCCTACCACGGTCAG
GAACCGAAAGTCTCAGCCGCGCGCTCACCCAACTGGGCTTCAAAACCTAC
CACGGCTGGGACATAGTCTTCGACGAACCGCCATATGCCCAGGGCTGGGC
GCAGCTATCCGAGCGAAAATATTCCGGCACGCAAGGGGCAGGCACTGCCC
CAATCAGTCGCGCTGAGTTCGATGCCCTGCTGGGGCATTGTGATGCAGTG
GTGGACACGGCAGCCGCCATGTTCAGCGTGGAAATGATCCAGGCGTATCC
AGAGGCCAAGGTGATTTTGAATACGCGGCAAGACGTAGATGCCTGGCACC
GCAGCGCCATGAAGACATTAGTTGCAGAGGGTGAAGACCAGTGGATGGTA
TGGTTTTTGCACATCTTCACGGCGGATATGTACTGGCTGTGGAGATTGTA
TTATACGTTCGGGTATCCCGGCATGTTTCGTGGGCGGACGACCAAGGAGG
GGCTTACGAAACATGGGAAGCGGGTATATCAGGAGCATGGGTTGATGATT
CGAGGGTCGGTGCCGGAGGAGAGGCTTCTGGAATGGGATGTTGAAGATGG
ATGGGGTCCTTTGTGTGAGTTTCTGGGCAAAGATATCCCCGATGAGCCGT
TCCCAAACACGAATAATCCGGCAGCTTTTCGGAAGCATATCGAAGATCTG
GTGCATCCGAGAGCTAAACGGAGTCTGTATAATTTTGCATGCTGTGCTAC
TTCAGCGGGCGTGTTGGTAACTGCTATTGTGTTGGGGGTGAAGAAGAGAC
AACTATGGCAAATGTTGATCTCGGAGATACCGGTAGTTATGGGGCAATGC
TTGGAATCATTATCACGTTCCAAGTAGATGAAAACCTTGCGGGGCGCTAT
TTATGGCTTCCCCCGACCCCCACCACGCATCCGCACCAAGCCACTCCAAG
TGATCTGTGTAGGCCTACCACGGTCAGGAACCGAAAGTCTCAGCCGCGCG
CTCACCCAACTGGGCTTCAAAACCTACCACGGCTGGGACATAGTCTTCGA
CGAACCGCCATATGCCCAGGGCTGGGCGCAGCTATCCGAGCGAAAATATT
CCGGCACGCAAGGGGCAGGCACTGCCCCAATCAGTCGCGCTGAGTTCGAT
GCCCTGCTGGGGCATTGTGATGCAGTGGTGGACACGGCAGCCGCCATGTT
CAGCGTGGAAATGATCCAGGCGTATCCAGAGGCCAAGGTGATTTTGAATA
CGCGGCAAGACGTAGATGCCTGGCACCGCAGCGCCATGAAGACATTAGTT
GCAGAGGGTGAAGACCAGTGGATGGTATGGTTTTTGCACATCTTCACGGC
GGATATGTACTGGCTGTGGAGATTGTATTATACGTTCGGGTATCCCGGCA
TGTTTCGTGGGCGGACGACCAAGGAGGGGCTTACGAAACATGGGAAGCGG
GTATATCAGGAGCATGGGTTGATGATTCGAGGGTCGGTGCCGGAGGAGAG
GCTTCTGGAATGGGATGTTGAAGATGGATGGGGTCCTTTGTGTGAGTTTC
TGGGCAAAGATATCCCCGATGAGCCGTTCCCAAACACGAATAATCCGGCA
GCTTTTCGGAAGCATATCGAAGATCTGGTGCATCCGAGAGCTAAACGGAG
TCTGTATAATTTTGCATGCTGTGCTACTTCAGCGGGCGTGTTGGTAACTG
CTATTGTGTTGGGGGTGAAGAAGAGACAACTATGGCAAATGTTGATCTCG
GAGATACCGGTAGTTATGGGGCAATGCTTGGAATCATTATCACGTTCCAA
GTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_43922ASPNIDRAFT_43922Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_43922-T1.exon1ASPNIDRAFT_43922-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_43922-T1.exon2ASPNIDRAFT_43922-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_43922-T1.cdsASPNIDRAFT_43922-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_43922-T1ASPNIDRAFT_43922-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR040632
DBxrefPFAM:PF17784
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000005.1supercontigACJE01000005.1:133915..134904 +
Powered by Drupal