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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000016.1:332374..334271- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_44271-T1 ID=ASPNIDRAFT_44271-T1|Name=ASPNIDRAFT_44271-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1898bp|location=Sequence derived from alignment at ACJE01000016.1:332374..334271- (Aspergillus niger ATCC 1015)
ATGCCCAACTCCACAGGGGCGATCACCGCAAACCCATTCGAAGAGCCACA
GCGACGGATCAACGAGTACACTGCCCAGGAAATCGCAACTTTGCAAGCTC
GTCTCGATAAGAAGCTCGGCCCCGAATACATCTCTTCCAGGCCTGGGGCT
GCGGGACAGAGAGTACACTACTTGTCGGCCGATAAATGCATCAACCTGGC
TAACGAAGTTTTCGGGTTCAATGGCTGGTCAAGCTCGATTCAGAATATTC
AGATTGATTTCGTCGAGGAGAGTCCCAATACTGGGAAGATCAGCCTGGGT
CTCTCTGTTATTGTGAGGGTGACTCTGAAAGATGGTACATATCACGAGGT
AGGCATCACTGTATTGCAGCGAGCTTGCCCTATATCTCAGCTAAGTCTCG
AGTGGTATTAGGATATCGGTTACGGTCACATCGAGAACTGTAAAGGGAAG
GCTGCTGCTTTTGAGAAAGCTAAGAAAGAGGGGACAACCGATGCTCTAAA
GCGGGCTCTGAGGAACTTCGGCAATGTCCTGGGCAACTGTGTCTACGATA
AGGACTATGTGTCGAAGGTCACCAAAGTAAAGACTGTTCCGGTATGTGAC
CGAGGTGTGGACAATCTTTTCACGACGACTGACACGCTCTAGGCCAAATG
GGATGTCGACGAACTGCACCGTCACCCAGACTTTGTTCCCAGGAAAGAGC
CCGTAAAACCAAAGCCCAGCCCGGAAGACGATGATCTACCACCTCGGCCA
ACGGACGTTGGCAAGAGCAGTAGTATCGACGATTCGATGGCATTTGATGG
CGACGGGGAGTTCGGAAGTAAGCAACAATGGCATGTCACGATCCCTTACA
ACCGCTAACCACCATCATAGGTGACCTATTTGATGAAGCCGACTTCGGGG
TAGGCGGAACAGGCAACCCAGACGAGGTAGTACTAGGACCAGAAACACAG
AAGCAGCCACCGACGCCTCTAAATGGACCCAATGTACCTCGACAGCCATT
CAATAACAACGCCCGTGCACCGATGAGGCCCAACCCAGCCATGGTAACTC
CATCTAAGCCGGAACGGCCCTTCAACCCAGCTCCTGGTGCCAGACAAAAT
CCCGCTCCTCAGCCCTTTAACAGCAGACTCAACCCCTCCGCAGCCCAAAA
TCAGCAAGCACCTCAACGACAACCCATGGCCCCTCAAGGGCCCCAGCAAA
ACCTCCCCAACAACCGAATGATCCCACCAGCACAAGCAGCAGCAGCCGCA
TCAACCACAGGTGGTGCCGTGCCCATCAAACGTGAATTCGGGGCATCGAC
CATCAACGAACCTCCCAGACCCCAAGACACACTGCCCGGCACGCCCTCCG
CATCATTCTTCTCAGCTCGCGCAGTCGACCTCCTCCGCGACAACCCTAAC
GGGATCCCATCCGGAGCCCCAGTCTTCGACCCACACGCGGAGAGTCCCTC
CATCCGCAAGACTGCAGGCATCGACCACAACAAGAGTCTTCCTGTCTCCA
GGCCCATGCTCGCCGGTGCCGGCGCCGCCTCCCCAGCAACCAATAACACC
CGAGACTTCGTCAACCCATCTCAAGATATGAATCGCAGGATCGGTGCCCC
GGGCATGAACAGTCCCATGAACAGACCCATGTCCACATCATCTTACCGGC
CCTTGACACGGCCAAATATCAATGCCCCGGGTGCAGCTGCGGCCGCCAAT
CGTGCAACTACCCCGGGTCTTGCACCGCAGAACGTGAACGGGAAACGACC
CCCTCTGTCTGATGTGACGAATGCCTCGAACCCGAGTGGCGGCAGCGGGC
CTGCTCCACCGGGGGTCAGTGAGAATGACCCGAAACGACCCAAGGTAAAC
CCGGGTTCTACTGCTGCGGCGGCGCCGCCGCAGCAGCAGCAGCAGTGA back to topCoding sequence (CDS) from alignment at ACJE01000016.1:332374..334271- >ASPNIDRAFT_44271-T1 ID=ASPNIDRAFT_44271-T1|Name=ASPNIDRAFT_44271-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=6924bp|location=Sequence derived from alignment at ACJE01000016.1:332374..334271- (Aspergillus niger ATCC 1015)
GTGACCTATTTGATGAAGCCGACTTCGGGGTAGGCGGAACAGGCAACCCA
GACGAGGTAGTACTAGGACCAGAAACACAGAAGCAGCCACCGACGCCTCT
AAATGGACCCAATGTACCTCGACAGCCATTCAATAACAACGCCCGTGCAC
CGATGAGGCCCAACCCAGCCATGGTAACTCCATCTAAGCCGGAACGGCCC
TTCAACCCAGCTCCTGGTGCCAGACAAAATCCCGCTCCTCAGCCCTTTAA
CAGCAGACTCAACCCCTCCGCAGCCCAAAATCAGCAAGCACCTCAACGAC
AACCCATGGCCCCTCAAGGGCCCCAGCAAAACCTCCCCAACAACCGAATG
ATCCCACCAGCACAAGCAGCAGCAGCCGCATCAACCACAGGTGGTGCCGT
GCCCATCAAACGTGAATTCGGGGCATCGACCATCAACGAACCTCCCAGAC
CCCAAGACACACTGCCCGGCACGCCCTCCGCATCATTCTTCTCAGCTCGC
GCAGTCGACCTCCTCCGCGACAACCCTAACGGGATCCCATCCGGAGCCCC
AGTCTTCGACCCACACGCGGAGAGTCCCTCCATCCGCAAGACTGCAGGCA
TCGACCACAACAAGAGTCTTCCTGTCTCCAGGCCCATGCTCGCCGGTGCC
GGCGCCGCCTCCCCAGCAACCAATAACACCCGAGACTTCGTCAACCCATC
TCAAGATATGAATCGCAGGATCGGTGCCCCGGGCATGAACAGTCCCATGA
ACAGACCCATGTCCACATCATCTTACCGGCCCTTGACACGGCCAAATATC
AATGCCCCGGGTGCAGCTGCGGCCGCCAATCGTGCAACTACCCCGGGTCT
TGCACCGCAGAACGTGAACGGGAAACGACCCCCTCTGTCTGATGTGACGA
ATGCCTCGAACCCGAGTGGCGGCAGCGGGCCTGCTCCACCGGGGGTCAGT
GAGAATGACCCGAAACGACCCAAGGTAAACCCGGGTTCTACTGCTGCGGC
GGCGCCGCCGCAGCAGCAGCAGCAGTGAGCCAAATGGGATGTCGACGAAC
TGCACCGTCACCCAGACTTTGTTCCCAGGAAAGAGCCCGTAAAACCAAAG
CCCAGCCCGGAAGACGATGATCTACCACCTCGGCCAACGGACGTTGGCAA
GAGCAGTAGTATCGACGATTCGATGGCATTTGATGGCGACGGGGAGTTCG
GAAGATATCGGTTACGGTCACATCGAGAACTGTAAAGGGAAGGCTGCTGC
TTTTGAGAAAGCTAAGAAAGAGGGGACAACCGATGCTCTAAAGCGGGCTC
TGAGGAACTTCGGCAATGTCCTGGGCAACTGTGTCTACGATAAGGACTAT
GTGTCGAAGGTCACCAAAGTAAAGACTGTTCCGATGCCCAACTCCACAGG
GGCGATCACCGCAAACCCATTCGAAGAGCCACAGCGACGGATCAACGAGT
ACACTGCCCAGGAAATCGCAACTTTGCAAGCTCGTCTCGATAAGAAGCTC
GGCCCCGAATACATCTCTTCCAGGCCTGGGGCTGCGGGACAGAGAGTACA
CTACTTGTCGGCCGATAAATGCATCAACCTGGCTAACGAAGTTTTCGGGT
TCAATGGCTGGTCAAGCTCGATTCAGAATATTCAGATTGATTTCGTCGAG
GAGAGTCCCAATACTGGGAAGATCAGCCTGGGTCTCTCTGTTATTGTGAG
GGTGACTCTGAAAGATGGTACATATCACGAGGTGACCTATTTGATGAAGC
CGACTTCGGGGTAGGCGGAACAGGCAACCCAGACGAGGTAGTACTAGGAC
CAGAAACACAGAAGCAGCCACCGACGCCTCTAAATGGACCCAATGTACCT
CGACAGCCATTCAATAACAACGCCCGTGCACCGATGAGGCCCAACCCAGC
CATGGTAACTCCATCTAAGCCGGAACGGCCCTTCAACCCAGCTCCTGGTG
CCAGACAAAATCCCGCTCCTCAGCCCTTTAACAGCAGACTCAACCCCTCC
GCAGCCCAAAATCAGCAAGCACCTCAACGACAACCCATGGCCCCTCAAGG
GCCCCAGCAAAACCTCCCCAACAACCGAATGATCCCACCAGCACAAGCAG
CAGCAGCCGCATCAACCACAGGTGGTGCCGTGCCCATCAAACGTGAATTC
GGGGCATCGACCATCAACGAACCTCCCAGACCCCAAGACACACTGCCCGG
CACGCCCTCCGCATCATTCTTCTCAGCTCGCGCAGTCGACCTCCTCCGCG
ACAACCCTAACGGGATCCCATCCGGAGCCCCAGTCTTCGACCCACACGCG
GAGAGTCCCTCCATCCGCAAGACTGCAGGCATCGACCACAACAAGAGTCT
TCCTGTCTCCAGGCCCATGCTCGCCGGTGCCGGCGCCGCCTCCCCAGCAA
CCAATAACACCCGAGACTTCGTCAACCCATCTCAAGATATGAATCGCAGG
ATCGGTGCCCCGGGCATGAACAGTCCCATGAACAGACCCATGTCCACATC
ATCTTACCGGCCCTTGACACGGCCAAATATCAATGCCCCGGGTGCAGCTG
CGGCCGCCAATCGTGCAACTACCCCGGGTCTTGCACCGCAGAACGTGAAC
GGGAAACGACCCCCTCTGTCTGATGTGACGAATGCCTCGAACCCGAGTGG
CGGCAGCGGGCCTGCTCCACCGGGGGTCAGTGAGAATGACCCGAAACGAC
CCAAGGTAAACCCGGGTTCTACTGCTGCGGCGGCGCCGCCGCAGCAGCAG
CAGCAGTGAGCCAAATGGGATGTCGACGAACTGCACCGTCACCCAGACTT
TGTTCCCAGGAAAGAGCCCGTAAAACCAAAGCCCAGCCCGGAAGACGATG
ATCTACCACCTCGGCCAACGGACGTTGGCAAGAGCAGTAGTATCGACGAT
TCGATGGCATTTGATGGCGACGGGGAGTTCGGAAGATATCGGTTACGGTC
ACATCGAGAACTGTAAAGGGAAGGCTGCTGCTTTTGAGAAAGCTAAGAAA
GAGGGGACAACCGATGCTCTAAAGCGGGCTCTGAGGAACTTCGGCAATGT
CCTGGGCAACTGTGTCTACGATAAGGACTATGTGTCGAAGGTCACCAAAG
TAAAGACTGTTCCGATGCCCAACTCCACAGGGGCGATCACCGCAAACCCA
TTCGAAGAGCCACAGCGACGGATCAACGAGTACACTGCCCAGGAAATCGC
AACTTTGCAAGCTCGTCTCGATAAGAAGCTCGGCCCCGAATACATCTCTT
CCAGGCCTGGGGCTGCGGGACAGAGAGTACACTACTTGTCGGCCGATAAA
TGCATCAACCTGGCTAACGAAGTTTTCGGGTTCAATGGCTGGTCAAGCTC
GATTCAGAATATTCAGATTGATTTCGTCGAGGAGAGTCCCAATACTGGGA
AGATCAGCCTGGGTCTCTCTGTTATTGTGAGGGTGACTCTGAAAGATGGT
ACATATCACGAGGTGACCTATTTGATGAAGCCGACTTCGGGGTAGGCGGA
ACAGGCAACCCAGACGAGGTAGTACTAGGACCAGAAACACAGAAGCAGCC
ACCGACGCCTCTAAATGGACCCAATGTACCTCGACAGCCATTCAATAACA
ACGCCCGTGCACCGATGAGGCCCAACCCAGCCATGGTAACTCCATCTAAG
CCGGAACGGCCCTTCAACCCAGCTCCTGGTGCCAGACAAAATCCCGCTCC
TCAGCCCTTTAACAGCAGACTCAACCCCTCCGCAGCCCAAAATCAGCAAG
CACCTCAACGACAACCCATGGCCCCTCAAGGGCCCCAGCAAAACCTCCCC
AACAACCGAATGATCCCACCAGCACAAGCAGCAGCAGCCGCATCAACCAC
AGGTGGTGCCGTGCCCATCAAACGTGAATTCGGGGCATCGACCATCAACG
AACCTCCCAGACCCCAAGACACACTGCCCGGCACGCCCTCCGCATCATTC
TTCTCAGCTCGCGCAGTCGACCTCCTCCGCGACAACCCTAACGGGATCCC
ATCCGGAGCCCCAGTCTTCGACCCACACGCGGAGAGTCCCTCCATCCGCA
AGACTGCAGGCATCGACCACAACAAGAGTCTTCCTGTCTCCAGGCCCATG
CTCGCCGGTGCCGGCGCCGCCTCCCCAGCAACCAATAACACCCGAGACTT
CGTCAACCCATCTCAAGATATGAATCGCAGGATCGGTGCCCCGGGCATGA
ACAGTCCCATGAACAGACCCATGTCCACATCATCTTACCGGCCCTTGACA
CGGCCAAATATCAATGCCCCGGGTGCAGCTGCGGCCGCCAATCGTGCAAC
TACCCCGGGTCTTGCACCGCAGAACGTGAACGGGAAACGACCCCCTCTGT
CTGATGTGACGAATGCCTCGAACCCGAGTGGCGGCAGCGGGCCTGCTCCA
CCGGGGGTCAGTGAGAATGACCCGAAACGACCCAAGGTAAACCCGGGTTC
TACTGCTGCGGCGGCGCCGCCGCAGCAGCAGCAGCAGTGAGCCAAATGGG
ATGTCGACGAACTGCACCGTCACCCAGACTTTGTTCCCAGGAAAGAGCCC
GTAAAACCAAAGCCCAGCCCGGAAGACGATGATCTACCACCTCGGCCAAC
GGACGTTGGCAAGAGCAGTAGTATCGACGATTCGATGGCATTTGATGGCG
ACGGGGAGTTCGGAAGATATCGGTTACGGTCACATCGAGAACTGTAAAGG
GAAGGCTGCTGCTTTTGAGAAAGCTAAGAAAGAGGGGACAACCGATGCTC
TAAAGCGGGCTCTGAGGAACTTCGGCAATGTCCTGGGCAACTGTGTCTAC
GATAAGGACTATGTGTCGAAGGTCACCAAAGTAAAGACTGTTCCGATGCC
CAACTCCACAGGGGCGATCACCGCAAACCCATTCGAAGAGCCACAGCGAC
GGATCAACGAGTACACTGCCCAGGAAATCGCAACTTTGCAAGCTCGTCTC
GATAAGAAGCTCGGCCCCGAATACATCTCTTCCAGGCCTGGGGCTGCGGG
ACAGAGAGTACACTACTTGTCGGCCGATAAATGCATCAACCTGGCTAACG
AAGTTTTCGGGTTCAATGGCTGGTCAAGCTCGATTCAGAATATTCAGATT
GATTTCGTCGAGGAGAGTCCCAATACTGGGAAGATCAGCCTGGGTCTCTC
TGTTATTGTGAGGGTGACTCTGAAAGATGGTACATATCACGAGGTGACCT
ATTTGATGAAGCCGACTTCGGGGTAGGCGGAACAGGCAACCCAGACGAGG
TAGTACTAGGACCAGAAACACAGAAGCAGCCACCGACGCCTCTAAATGGA
CCCAATGTACCTCGACAGCCATTCAATAACAACGCCCGTGCACCGATGAG
GCCCAACCCAGCCATGGTAACTCCATCTAAGCCGGAACGGCCCTTCAACC
CAGCTCCTGGTGCCAGACAAAATCCCGCTCCTCAGCCCTTTAACAGCAGA
CTCAACCCCTCCGCAGCCCAAAATCAGCAAGCACCTCAACGACAACCCAT
GGCCCCTCAAGGGCCCCAGCAAAACCTCCCCAACAACCGAATGATCCCAC
CAGCACAAGCAGCAGCAGCCGCATCAACCACAGGTGGTGCCGTGCCCATC
AAACGTGAATTCGGGGCATCGACCATCAACGAACCTCCCAGACCCCAAGA
CACACTGCCCGGCACGCCCTCCGCATCATTCTTCTCAGCTCGCGCAGTCG
ACCTCCTCCGCGACAACCCTAACGGGATCCCATCCGGAGCCCCAGTCTTC
GACCCACACGCGGAGAGTCCCTCCATCCGCAAGACTGCAGGCATCGACCA
CAACAAGAGTCTTCCTGTCTCCAGGCCCATGCTCGCCGGTGCCGGCGCCG
CCTCCCCAGCAACCAATAACACCCGAGACTTCGTCAACCCATCTCAAGAT
ATGAATCGCAGGATCGGTGCCCCGGGCATGAACAGTCCCATGAACAGACC
CATGTCCACATCATCTTACCGGCCCTTGACACGGCCAAATATCAATGCCC
CGGGTGCAGCTGCGGCCGCCAATCGTGCAACTACCCCGGGTCTTGCACCG
CAGAACGTGAACGGGAAACGACCCCCTCTGTCTGATGTGACGAATGCCTC
GAACCCGAGTGGCGGCAGCGGGCCTGCTCCACCGGGGGTCAGTGAGAATG
ACCCGAAACGACCCAAGGTAAACCCGGGTTCTACTGCTGCGGCGGCGCCG
CCGCAGCAGCAGCAGCAGTGAGCCAAATGGGATGTCGACGAACTGCACCG
TCACCCAGACTTTGTTCCCAGGAAAGAGCCCGTAAAACCAAAGCCCAGCC
CGGAAGACGATGATCTACCACCTCGGCCAACGGACGTTGGCAAGAGCAGT
AGTATCGACGATTCGATGGCATTTGATGGCGACGGGGAGTTCGGAAGATA
TCGGTTACGGTCACATCGAGAACTGTAAAGGGAAGGCTGCTGCTTTTGAG
AAAGCTAAGAAAGAGGGGACAACCGATGCTCTAAAGCGGGCTCTGAGGAA
CTTCGGCAATGTCCTGGGCAACTGTGTCTACGATAAGGACTATGTGTCGA
AGGTCACCAAAGTAAAGACTGTTCCGATGCCCAACTCCACAGGGGCGATC
ACCGCAAACCCATTCGAAGAGCCACAGCGACGGATCAACGAGTACACTGC
CCAGGAAATCGCAACTTTGCAAGCTCGTCTCGATAAGAAGCTCGGCCCCG
AATACATCTCTTCCAGGCCTGGGGCTGCGGGACAGAGAGTACACTACTTG
TCGGCCGATAAATGCATCAACCTGGCTAACGAAGTTTTCGGGTTCAATGG
CTGGTCAAGCTCGATTCAGAATATTCAGATTGATTTCGTCGAGGAGAGTC
CCAATACTGGGAAGATCAGCCTGGGTCTCTCTGTTATTGTGAGGGTGACT
CTGAAAGATGGTACATATCACGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0045002 | double-strand break repair via single-strand annealing |
| GO:0000730 | DNA recombinase assembly |
| GO:0000724 | double-strand break repair via homologous recombination |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09261PJZ |
| DBxref | InterPro:IPR042525 |
| DBxref | InterPro:IPR041247 |
| DBxref | InterPro:IPR004585 |
| DBxref | PFAM:PF04098 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000016.1 | supercontig | ACJE01000016.1:332374..334271 - |
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