You are here

Home

ASPNIDRAFT_44347-T1, ASPNIDRAFT_44347-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_44347-T1
Unique NameASPNIDRAFT_44347-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000016.1:34617..35614-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_44347-T1 ID=ASPNIDRAFT_44347-T1|Name=ASPNIDRAFT_44347-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=998bp|location=Sequence derived from alignment at ACJE01000016.1:34617..35614- (Aspergillus niger ATCC 1015)
ATGTCCCCTCGTATGCCCCGGAAGCTTTCCCAGCTTCCCCTGACGACAAT
CTGGGCGTCTCAATTCCCGACTTCTTCCATCCGCAGCAGCCAATTGTCCA
TCACCTCAGTCCGCTCCTTCGGTATCCGGTCCTTGAACCCCCCGGAGACT
TCGCGCTTCAACGTCAGCCATGACCTGCCCGTGCTGAAATCGACACCCAC
CGCCGCCCTCGAGCGCAAGGCCAACACCCTTCCCCTGCGGACCGGTGCCA
TCACCTTCAAGAAGGGCATGACCGCCCTGTATGACCCCGAGACCGGCAAA
CGTGTTCCCTGCACCGTGCTGCAGCTCGATCGAGTCGAAGTCGTCTCGCA
CAAGACTCGCCAGAAGCATGGATACTATGCTGTTCAGCTGGGTGCTGGAT
GGAGGCGTCCCGATAACTTGACCAAGTCCCTGCTCGGTCATTTCACTGCC
AATGGCATCTCGCCCAAGCGTCATGTCTATGAGTTCCGGGTTAAGGATGA
GAGCGGGCTTTTGCCTGTTGGGCAGACTGTCAGTGCGGACTGGTTTCAGG
AGGGACAGTTCGTTGATGCGAGGTCTAATACGAAGGGTAAGGGCTTCGCG
GGTGTTATGAAGAGACATGGTTTCGGTGGTCAGGATCGCAGTCACGGTGT
ATCCTTGACGCATCGTTCGCTTGGTTCCGCTGGTCCTAGTCAGGGTGGTG
GTTCTCGTGTTTACCCTGGAAAGAAGATGGCGGGTAACATGGGTAATGAG
CAGAACACGGTTCAGAATCTGAGGATTTTGAAGGTGGACGCTGAGAATGG
AATTGTTGTGGTCAATGGTAGGATACCCCGAAATACTCCTCTGTTTAAGT
GGATTTCATATATGTAAAAGTTGATGCTGACTTTTGGGTTTTAATAGGAT
CCGTCAGTGGTCCCAAGGGCTGCGTTGTCCGGATACAGGATGCTATTAAG
AAGCCGTGGCCGGAAGCTTCCCCTGCGACTACTGAGGCTTCTGAATAA
back to top

Coding sequence (CDS) from alignment at ACJE01000016.1:34617..35614-

>ASPNIDRAFT_44347-T1 ID=ASPNIDRAFT_44347-T1|Name=ASPNIDRAFT_44347-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1836bp|location=Sequence derived from alignment at ACJE01000016.1:34617..35614- (Aspergillus niger ATCC 1015)
GATCCGTCAGTGGTCCCAAGGGCTGCGTTGTCCGGATACAGGATGCTATT
AAGAAGCCGTGGCCGGAAGCTTCCCCTGCGACTACTGAGGCTTCTGAATA
AATGTCCCCTCGTATGCCCCGGAAGCTTTCCCAGCTTCCCCTGACGACAA
TCTGGGCGTCTCAATTCCCGACTTCTTCCATCCGCAGCAGCCAATTGTCC
ATCACCTCAGTCCGCTCCTTCGGTATCCGGTCCTTGAACCCCCCGGAGAC
TTCGCGCTTCAACGTCAGCCATGACCTGCCCGTGCTGAAATCGACACCCA
CCGCCGCCCTCGAGCGCAAGGCCAACACCCTTCCCCTGCGGACCGGTGCC
ATCACCTTCAAGAAGGGCATGACCGCCCTGTATGACCCCGAGACCGGCAA
ACGTGTTCCCTGCACCGTGCTGCAGCTCGATCGAGTCGAAGTCGTCTCGC
ACAAGACTCGCCAGAAGCATGGATACTATGCTGTTCAGCTGGGTGCTGGA
TGGAGGCGTCCCGATAACTTGACCAAGTCCCTGCTCGGTCATTTCACTGC
CAATGGCATCTCGCCCAAGCGTCATGTCTATGAGTTCCGGGTTAAGGATG
AGAGCGGGCTTTTGCCTGTTGGGCAGACTGTCAGTGCGGACTGGTTTCAG
GAGGGACAGTTCGTTGATGCGAGGTCTAATACGAAGGGTAAGGGCTTCGC
GGGTGTTATGAAGAGACATGGTTTCGGTGGTCAGGATCGCAGTCACGGTG
TATCCTTGACGCATCGTTCGCTTGGTTCCGCTGGTCCTAGTCAGGGTGGT
GGTTCTCGTGTTTACCCTGGAAAGAAGATGGCGGGTAACATGGGTAATGA
GCAGAACACGGTTCAGAATCTGAGGATTTTGAAGGTGGACGCTGAGAATG
GAATTGTTGTGGTCAATGGATCCGTCAGTGGTCCCAAGGGCTGCGTTGTC
CGGATACAGGATGCTATTAAGAAGCCGTGGCCGGAAGCTTCCCCTGCGAC
TACTGAGGCTTCTGAATAAATGTCCCCTCGTATGCCCCGGAAGCTTTCCC
AGCTTCCCCTGACGACAATCTGGGCGTCTCAATTCCCGACTTCTTCCATC
CGCAGCAGCCAATTGTCCATCACCTCAGTCCGCTCCTTCGGTATCCGGTC
CTTGAACCCCCCGGAGACTTCGCGCTTCAACGTCAGCCATGACCTGCCCG
TGCTGAAATCGACACCCACCGCCGCCCTCGAGCGCAAGGCCAACACCCTT
CCCCTGCGGACCGGTGCCATCACCTTCAAGAAGGGCATGACCGCCCTGTA
TGACCCCGAGACCGGCAAACGTGTTCCCTGCACCGTGCTGCAGCTCGATC
GAGTCGAAGTCGTCTCGCACAAGACTCGCCAGAAGCATGGATACTATGCT
GTTCAGCTGGGTGCTGGATGGAGGCGTCCCGATAACTTGACCAAGTCCCT
GCTCGGTCATTTCACTGCCAATGGCATCTCGCCCAAGCGTCATGTCTATG
AGTTCCGGGTTAAGGATGAGAGCGGGCTTTTGCCTGTTGGGCAGACTGTC
AGTGCGGACTGGTTTCAGGAGGGACAGTTCGTTGATGCGAGGTCTAATAC
GAAGGGTAAGGGCTTCGCGGGTGTTATGAAGAGACATGGTTTCGGTGGTC
AGGATCGCAGTCACGGTGTATCCTTGACGCATCGTTCGCTTGGTTCCGCT
GGTCCTAGTCAGGGTGGTGGTTCTCGTGTTTACCCTGGAAAGAAGATGGC
GGGTAACATGGGTAATGAGCAGAACACGGTTCAGAATCTGAGGATTTTGA
AGGTGGACGCTGAGAATGGAATTGTTGTGGTCAATG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_44347ASPNIDRAFT_44347Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_44347-T1ASPNIDRAFT_44347-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_44347-T1.cdsASPNIDRAFT_44347-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_44347-T1.exon2ASPNIDRAFT_44347-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_44347-T1.exon1ASPNIDRAFT_44347-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteBUSCO:EOG092642CB
DBxrefInterPro:IPR009000
DBxrefInterPro:IPR019926
DBxrefInterPro:IPR000597
DBxrefInterPro:IPR019927
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000016.1supercontigACJE01000016.1:34617..35614 -
Powered by Drupal