You are here

Home

ASPNIDRAFT_44359-T1, ASPNIDRAFT_44359-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_44359-T1
Unique NameASPNIDRAFT_44359-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000016.1:13048..15186+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_44359-T1 ID=ASPNIDRAFT_44359-T1|Name=ASPNIDRAFT_44359-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2139bp|location=Sequence derived from alignment at ACJE01000016.1:13048..15186+ (Aspergillus niger ATCC 1015)
ATGTCAGGCGTGTACCGCGCCATGAAGAACCTCGTTCCCGATCACTCTGA
AGCTCTTTCTGAAGTCCAAACCCATGAACCGATTACTTCGTTCAAATCAG
GGTTGACGACTCCCTGGATTTTCCTCCAACCCACGACTGAGTTGAAAACT
ACTATCACTGGCTCTGTGAAGTACTATTTAGATTCGTTGGCTTCGTCGGT
CGGCGATTCCCAATGTGCACGCCAACGCAGGAATAGAAAGCGCAAAAGGT
CCGAAGTTGAGGAAAGTTCTACAAGCCAGGCCCTGCAGCTCAAGCAACTT
TATGTCGATGGCTTTACTTCTGACCAGATATGGCAACAAGCCCTGAGAAT
CCTTGATTCTTCAGGTGGTGAGGTTGAGCGGGATTTTACTTGGTGGTCTG
CAGTGTCCAAACCATACGACCCGCCCCTGACCTCAACTTATGATTTGGCT
CTTGATGACGCCGAATTAGAGGGCAGCAACCTCGACTCTCAGTCAGAGAC
CGATCTTACCCGATCGAGTATCGATGATGACGACCTTAGTTCAGTACACG
ATCACTCTGAAACCTCCCCCCACGATGATTCAGACGTCGAAGAAGACATT
GAAAAATTATCCGACAATATTCCCGGAAACGACATCGACGAAGGTGAACA
AGAAACGTATGTGGAGGATCCCTTCGGCTTGAATGATGGTTTCTTCTCGA
TAGATGATTTCAACAAGCAATCGGAACTACTCGAAAGACAAGACGTTAGT
GGTGGTCCAGACAATGATTTTGAGAGCGAGGATGATGAAATCGATTGGCA
CGCAAATCCTCTTAGTACGACAGGGTCAATGTCTTTATCGAAGGGAGACA
TGCCACAGGAGAACTCTGACGGGAATGGTGACGAGAATATGTCTGACAGT
GAAGAGGAGGGACCAACATTTGGGGATGCAGGCCTTGAGGACGATTCCGA
TATGGACGAAGATAATGTCTATGCCACAAACTCCGGAGGCGAAGGTTGGA
TAAACACTAGCGACATAAAGTATTCTGACTTCTTCGCGCCTCCTCCGCGT
AAAGTTACTCGCAAAAAGTCTCGCTCCCTTCCCAAAACTCAGCCTGATAT
TGCTATTACCAACGACGACGTTGATCGTGCCATGGCTGATGTTCGCCGTG
ATCTCTTTGAAGACGAACCTTCCGGTGAAGACAGTGATGAACATGAAGTA
GCGCGAGGATCTCAGATCAATTATTCTAGTCATGAGAAGCAGCGTGCTCG
CATTGCTGATGAGATTCGCCGTTTGGAGGCTGCAAACGTTGCCAAGAAGG
ATTGGATGCTAGCTGGTGAAGCCAGGGCTGTCGAAAGGCCTGTGAACTCG
CTTATTGAAGAAGACCTGGATTTCGAAAGAATCGGAAAGCCCGTGCCAGT
CGTCACAGCAGAGATGTCAGAGGATATTGAAGAGCTTATCAAGCGTCGGA
TTCTCGCCAAACAATTTGACGAAGTAATACGACGTCGCCCTGGTGTTTCC
GACGCACTGAGCGCACGGGGAAGCCGTCCTGAATTGGAAGATACCAAACC
CCAGCAGAGTCTTGCTGAATTATATGAGGCCGACCATCTTCGTGCTACTG
ATCCAAACTTCGTTGACCCTAAAAATCAGAAGTTGATCCGCGAGCATGCT
ACTGTGACAAGTTTATGGAAAGAGATCAGCTCTCAATTAGACACGCTCTC
AAACTGGCATTACAAGCCCAAGGCTCCGCAGGCAAGCATCAATGTTGTCA
CCGATGTGGCAACAATTACTATGGAGGATGCTCAGCCGACAGCCAGCAAC
GCTGTCAATGGGACGGCAACCCTTGCGCCGCAGGAGATCTACGCACCTGG
CGACGATAACAAAGTCGCTGGTGAAATGATTTTGAAGAATGGAACGGCAA
TCGCCAAAGAGGAAATGACCCGGGAACAAAAGGCTAAGTTGAGGCGAGAG
CACAAGAAGCAAATCGCTAGCACCGCAAAATCTCAGAAGACAGGGAAAGC
GGCTGAGAAACAGCAGCTCATGTCGGACTTGAAGAAGGGTGGAGTCAAAT
TGATTGGAAAGCAGGGCGAAGTGACGAATATCAATGGCGGTAAAATCAAA
GAAGGTGTGAAGGAAGGTGGCCATGTGCTCAAGCTTTAG
back to top

Coding sequence (CDS) from alignment at ACJE01000016.1:13048..15186+

>ASPNIDRAFT_44359-T1 ID=ASPNIDRAFT_44359-T1|Name=ASPNIDRAFT_44359-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2139bp|location=Sequence derived from alignment at ACJE01000016.1:13048..15186+ (Aspergillus niger ATCC 1015)
ATGTCAGGCGTGTACCGCGCCATGAAGAACCTCGTTCCCGATCACTCTGA
AGCTCTTTCTGAAGTCCAAACCCATGAACCGATTACTTCGTTCAAATCAG
GGTTGACGACTCCCTGGATTTTCCTCCAACCCACGACTGAGTTGAAAACT
ACTATCACTGGCTCTGTGAAGTACTATTTAGATTCGTTGGCTTCGTCGGT
CGGCGATTCCCAATGTGCACGCCAACGCAGGAATAGAAAGCGCAAAAGGT
CCGAAGTTGAGGAAAGTTCTACAAGCCAGGCCCTGCAGCTCAAGCAACTT
TATGTCGATGGCTTTACTTCTGACCAGATATGGCAACAAGCCCTGAGAAT
CCTTGATTCTTCAGGTGGTGAGGTTGAGCGGGATTTTACTTGGTGGTCTG
CAGTGTCCAAACCATACGACCCGCCCCTGACCTCAACTTATGATTTGGCT
CTTGATGACGCCGAATTAGAGGGCAGCAACCTCGACTCTCAGTCAGAGAC
CGATCTTACCCGATCGAGTATCGATGATGACGACCTTAGTTCAGTACACG
ATCACTCTGAAACCTCCCCCCACGATGATTCAGACGTCGAAGAAGACATT
GAAAAATTATCCGACAATATTCCCGGAAACGACATCGACGAAGGTGAACA
AGAAACGTATGTGGAGGATCCCTTCGGCTTGAATGATGGTTTCTTCTCGA
TAGATGATTTCAACAAGCAATCGGAACTACTCGAAAGACAAGACGTTAGT
GGTGGTCCAGACAATGATTTTGAGAGCGAGGATGATGAAATCGATTGGCA
CGCAAATCCTCTTAGTACGACAGGGTCAATGTCTTTATCGAAGGGAGACA
TGCCACAGGAGAACTCTGACGGGAATGGTGACGAGAATATGTCTGACAGT
GAAGAGGAGGGACCAACATTTGGGGATGCAGGCCTTGAGGACGATTCCGA
TATGGACGAAGATAATGTCTATGCCACAAACTCCGGAGGCGAAGGTTGGA
TAAACACTAGCGACATAAAGTATTCTGACTTCTTCGCGCCTCCTCCGCGT
AAAGTTACTCGCAAAAAGTCTCGCTCCCTTCCCAAAACTCAGCCTGATAT
TGCTATTACCAACGACGACGTTGATCGTGCCATGGCTGATGTTCGCCGTG
ATCTCTTTGAAGACGAACCTTCCGGTGAAGACAGTGATGAACATGAAGTA
GCGCGAGGATCTCAGATCAATTATTCTAGTCATGAGAAGCAGCGTGCTCG
CATTGCTGATGAGATTCGCCGTTTGGAGGCTGCAAACGTTGCCAAGAAGG
ATTGGATGCTAGCTGGTGAAGCCAGGGCTGTCGAAAGGCCTGTGAACTCG
CTTATTGAAGAAGACCTGGATTTCGAAAGAATCGGAAAGCCCGTGCCAGT
CGTCACAGCAGAGATGTCAGAGGATATTGAAGAGCTTATCAAGCGTCGGA
TTCTCGCCAAACAATTTGACGAAGTAATACGACGTCGCCCTGGTGTTTCC
GACGCACTGAGCGCACGGGGAAGCCGTCCTGAATTGGAAGATACCAAACC
CCAGCAGAGTCTTGCTGAATTATATGAGGCCGACCATCTTCGTGCTACTG
ATCCAAACTTCGTTGACCCTAAAAATCAGAAGTTGATCCGCGAGCATGCT
ACTGTGACAAGTTTATGGAAAGAGATCAGCTCTCAATTAGACACGCTCTC
AAACTGGCATTACAAGCCCAAGGCTCCGCAGGCAAGCATCAATGTTGTCA
CCGATGTGGCAACAATTACTATGGAGGATGCTCAGCCGACAGCCAGCAAC
GCTGTCAATGGGACGGCAACCCTTGCGCCGCAGGAGATCTACGCACCTGG
CGACGATAACAAAGTCGCTGGTGAAATGATTTTGAAGAATGGAACGGCAA
TCGCCAAAGAGGAAATGACCCGGGAACAAAAGGCTAAGTTGAGGCGAGAG
CACAAGAAGCAAATCGCTAGCACCGCAAAATCTCAGAAGACAGGGAAAGC
GGCTGAGAAACAGCAGCTCATGTCGGACTTGAAGAAGGGTGGAGTCAAAT
TGATTGGAAAGCAGGGCGAAGTGACGAATATCAATGGCGGTAAAATCAAA
GAAGGTGTGAAGGAAGGTGGCCATGTGCTCAAGCTTTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0034457Mpp10 complex
GO:0005732small nucleolar ribonucleoprotein complex
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_44359ASPNIDRAFT_44359Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_44359-T1.exon1ASPNIDRAFT_44359-T1.exon1Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_44359-T1.cdsASPNIDRAFT_44359-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_44359-T1ASPNIDRAFT_44359-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09263ROQ
DBxrefInterPro:IPR012173
DBxrefPFAM:PF04006
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000016.1supercontigACJE01000016.1:13048..15186 +
Powered by Drupal