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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000012.1:25033..27843+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_44961-T1 ID=ASPNIDRAFT_44961-T1|Name=ASPNIDRAFT_44961-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2811bp|location=Sequence derived from alignment at ACJE01000012.1:25033..27843+ (Aspergillus niger ATCC 1015)
ATGCCACCCCCACCTGAGCCTCGCCAGATCAAAAGGCCCCGATTATCGCT
GAGTTGCATTGTCTGCCGCCGTCGCAAAGTTCGCTGCGGCCGCGAACACC
CGGAATGCGCCAACTGTGTCCGGATGAAGGAGAATTGTGTCTATAAGACT
ATGGTCCACGATGAGTTTACCGGCCGCGTACGCCAAGTATCTCCTCCTCC
TGTGCCCCAGGGTGATAACCCCAATGGACCGGAGTTTTGTGCCAACAATT
CGGAGGAGCGTACAGGAGGGTTTACTTGGTCGCACTGGATGTCACAAGGC
TCTGGCAATGTATTAGATCTCAGCGATGAGGCTCCCCTTCCGCGTCCGAC
CATTTCTCCTGCTTCTGCTCCTCCTCCTCAGAAACGCTCTACCCAAGCCA
AATGCGACGCTAGCTCTGTTCCTCATCCCCACCACTCTTCCACTATACTC
ACTCCGGCGCCATCAAGCCATCCGCAGGTGGATTTGGTATATCCGACAGT
ACCTTCCTGGGAAGAGGCCATCCAGCTACCCGATAACCATCACGCATCCT
CTCGGGCAGGAACAAGCAGGACGTCGAGTGTCTCCCAGGATGCCTCCCCA
GCGGTCTCGGAATCAGCCAGAGCGCCTTCTACATCTACAAGTTACAGTGG
TCTACCTAGTCCTGATTATCTGAGTGTACGACGGGGCGCACGTGTGCGGT
ATATTGGTCAAGCGTTTTGGGGCCTTGTGGCCGGGAAAGTCAGTGCTGCC
CAACCATGTAAGCGCAGTTCCCGCGGATACGCATGAGCTAACCTGGATTG
TTGGGCAACCGGCAGGAAACCCTGAGCGATGATTTCTTCGACTGCAACCG
TGATGCCTCAATGGAACAGTCTCTGACACATATATCCTCCTTGGGGATGT
TCAATCTATTACGGTCCCTACCTACCAAGCCCGTGAGCGATGCCCTCCTC
GATGCCTTCTTCTTCGCGGTGTGGCCGCTTTCTCCTCTGGTGCATGGCCC
GACTCTACGGGCGGACTACGATAATTTTTGGGAATGGTGTCGCAACAGCG
ATAGAGCGTTACCCCCAGAAAAGGTCCGCGATGACCCAACCTTTCTCTGC
CTTCTCTTTGCCATCCTGTATTGTGGCGCATCCGCTGCACCACCGACCAG
CTGGGCATGCACCAATCTGCAGAGCCTGCGGAAGGAAACGACCATCAAGC
ACTTGAAGTCGGCCTATACGACAAGTCTGTCTCTATGCCAGCATCTCGAA
CACCCGACATTGAACACACTAGTGTCTACATTGCTGACTGCACCGTTCTT
GGACAGAGATGTTGCGCCGATGCGCAATATGGTCTCCGTCAGCACAACAG
TCCGCATCGCCCAGAGTATGGGATTGCATCGAGAAGGAACTTGGTCATCT
TCATTGAGCCCCGTAGATCGGGAAATTCGTCGCCGGGCCTGGTGGTATAT
CATTGGGCTTGACGTACAGTCCAGCATATCCACAGGCCTACCCCCGTGCT
ACGCTACCGAGGCGCTAGATATAGTCAGCATGATAGCTGATACACGCGAT
GAAGATATCGGGGACCTTTCTAATCATCGCTCCCCGGAACCAGTCCCTCG
TCCTTCGGAGCAGTCCTTAGCCGTGATACTCGCCATAGCGCGCTCTGAAA
CGGCGCGTCTGCAGTCAAAGATCGTGTCGCGCCTGCAAAATGGAAGACGT
CTAGCTCAGACTGAACTTACTGAGCTTGTGACGTCGGCGAAAAAGCTGCA
ACAGAAGCTTGATACCTTGATTGCCCGTGTCCCTTCACAAGGGATTCCTG
AAAAAGGATTTATCCCCTCCCGCCTAGCCAAAGCATCTCCAGTCACTCAC
CCAGCACTTTATAGGGATGATGGCACTCATCCAACTGTTTTCTCCACTTG
GACAAGAATTATGTTGGTCCTTCTCAAATTCGAGGTAGCTGTTATTCTAC
AAAAGCCTTTCTTACCTGCCCCGGACAGTGCAGATCCGCATTCATGCAGG
GCATGGACCAGGTATGGTTCCCCTGACAACCTTACGATCTGCTACGACAG
TCTTATTGACAAAAGTTTGAACCTCTAGCGTGGCACATCTCTGCGTGAGC
TACTTGCGTATATTCCTCCAGCTCTATCAAACCCCTGCCTTCTCCCCCTA
CGTATGGTTTTGTTACCGACACTACGGACCTCTTCAATGTGTGTTTCTTA
TCCTCGTGTACCTACATACCTTTCCGGAATCAGGTGACATCGTGCTGGCT
CGATATTGCATCGATGAAATCATCGACCACACTGTATCCCATTACCAAGT
CCCGCAGGATTCATTCGGAGCAACTCGTGCAGACAATTCGGAATCCGATG
AAGGCGCAACGGAGGACCAAATACCCCTGGCTATTCAGGTTCTTGTTGAC
CTCCACAACCGACTGCAATCGCACCCGAGGTCTGATAACCAAACGACTGA
CAGGTTGGATGGAAATGAATACCAGTTCTCCCCATACTCCCTCGAACTTG
GAATTCAGGGTACTGAGGAGGACACAATAGACAAGAGCATCTTCTCCTTG
CCGTCTTTGTCATCTTCGTCATCCAGAACCCACATCCACCGCAATCAAGA
AGCCCCTTCTACGACTACTGCACCCCAAATGCCTTCTGGCACCAAACATG
GACCACCGAGTAGCGTGTTTGTCGCAGACAGCGACGGTGGCTCGGACCTG
GACATTCTTGCCAGTCTCTCTGATTTTGAGACGTGGTCATCCTCGTTGGT
TGTGGACCCAAGTGATATTCTCGCACACCCTACTTCGATGGCACCACACC
ATCCCGTTTGA back to topCoding sequence (CDS) from alignment at ACJE01000012.1:25033..27843+ >ASPNIDRAFT_44961-T1 ID=ASPNIDRAFT_44961-T1|Name=ASPNIDRAFT_44961-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=7362bp|location=Sequence derived from alignment at ACJE01000012.1:25033..27843+ (Aspergillus niger ATCC 1015)
ATGCCACCCCCACCTGAGCCTCGCCAGATCAAAAGGCCCCGATTATCGCT
GAGTTGCATTGTCTGCCGCCGTCGCAAAGTTCGCTGCGGCCGCGAACACC
CGGAATGCGCCAACTGTGTCCGGATGAAGGAGAATTGTGTCTATAAGACT
ATGGTCCACGATGAGTTTACCGGCCGCGTACGCCAAGTATCTCCTCCTCC
TGTGCCCCAGGGTGATAACCCCAATGGACCGGAGTTTTGTGCCAACAATT
CGGAGGAGCGTACAGGAGGGTTTACTTGGTCGCACTGGATGTCACAAGGC
TCTGGCAATGTATTAGATCTCAGCGATGAGGCTCCCCTTCCGCGTCCGAC
CATTTCTCCTGCTTCTGCTCCTCCTCCTCAGAAACGCTCTACCCAAGCCA
AATGCGACGCTAGCTCTGTTCCTCATCCCCACCACTCTTCCACTATACTC
ACTCCGGCGCCATCAAGCCATCCGCAGGTGGATTTGGTATATCCGACAGT
ACCTTCCTGGGAAGAGGCCATCCAGCTACCCGATAACCATCACGCATCCT
CTCGGGCAGGAACAAGCAGGACGTCGAGTGTCTCCCAGGATGCCTCCCCA
GCGGTCTCGGAATCAGCCAGAGCGCCTTCTACATCTACAAGTTACAGTGG
TCTACCTAGTCCTGATTATCTGAGTGTACGACGGGGCGCACGTGTGCGGT
ATATTGGTCAAGCGTTTTGGGGCCTTGTGGCCGGGAAAGAAACCCTGAGC
GATGATTTCTTCGACTGCAACCGTGATGCCTCAATGGAACAGTCTCTGAC
ACATATATCCTCCTTGGGGATGTTCAATCTATTACGGTCCCTACCTACCA
AGCCCGTGAGCGATGCCCTCCTCGATGCCTTCTTCTTCGCGGTGTGGCCG
CTTTCTCCTCTGGTGCATGGCCCGACTCTACGGGCGGACTACGATAATTT
TTGGGAATGGTGTCGCAACAGCGATAGAGCGTTACCCCCAGAAAAGGTCC
GCGATGACCCAACCTTTCTCTGCCTTCTCTTTGCCATCCTGTATTGTGGC
GCATCCGCTGCACCACCGACCAGCTGGGCATGCACCAATCTGCAGAGCCT
GCGGAAGGAAACGACCATCAAGCACTTGAAGTCGGCCTATACGACAAGTC
TGTCTCTATGCCAGCATCTCGAACACCCGACATTGAACACACTAGTGTCT
ACATTGCTGACTGCACCGTTCTTGGACAGAGATGTTGCGCCGATGCGCAA
TATGGTCTCCGTCAGCACAACAGTCCGCATCGCCCAGAGTATGGGATTGC
ATCGAGAAGGAACTTGGTCATCTTCATTGAGCCCCGTAGATCGGGAAATT
CGTCGCCGGGCCTGGTGGTATATCATTGGGCTTGACGTACAGTCCAGCAT
ATCCACAGGCCTACCCCCGTGCTACGCTACCGAGGCGCTAGATATAGTCA
GCATGATAGCTGATACACGCGATGAAGATATCGGGGACCTTTCTAATCAT
CGCTCCCCGGAACCAGTCCCTCGTCCTTCGGAGCAGTCCTTAGCCGTGAT
ACTCGCCATAGCGCGCTCTGAAACGGCGCGTCTGCAGTCAAAGATCGTGT
CGCGCCTGCAAAATGGAAGACGTCTAGCTCAGACTGAACTTACTGAGCTT
GTGACGTCGGCGAAAAAGCTGCAACAGAAGCTTGATACCTTGATTGCCCG
TGTCCCTTCACAAGGGATTCCTGAAAAAGGATTTATCCCCTCCCGCCTAG
CCAAAGCATCTCCACTCTATCAAACCCCTGCCTTCTCCCCCTACGTATGG
TTTTGTTACCGACACTACGGACCTCTTCAATGTGTGTTTCTTATCCTCGT
GTACCTACATACCTTTCCGGAATCAGGTGACATCGTGCTGGCTCGATATT
GCATCGATGAAATCATCGACCACACTGTATCCCATTACCAAGTCCCGCAG
GATTCATTCGGAGCAACTCGTGCAGACAATTCGGAATCCGATGAAGGCGC
AACGGAGGACCAAATACCCCTGGCTATTCAGGTTCTTGTTGACCTCCACA
ACCGACTGCAATCGCACCCGAGGTCTGATAACCAAACGACTGACAGGTTG
GATGGAAATGAATACCAGTTCTCCCCATACTCCCTCGAACTTGGAATTCA
GGGTACTGAGGAGGACACAATAGACAAGAGCATCTTCTCCTTGCCGTCTT
TGTCATCTTCGTCATCCAGAACCCACATCCACCGCAATCAAGAAGCCCCT
TCTACGACTACTGCACCCCAAATGCCTTCTGGCACCAAACATGGACCACC
GAGTAGCGTGTTTGTCGCAGACAGCGACGGTGGCTCGGACCTGGACATTC
TTGCCAGTCTCTCTGATTTTGAGACGTGGTCATCCTCGTTGGTTGTGGAC
CCAAGTGATATTCTCGCACACCCTACTTCGATGGCACCACACCATCCCGT
TTGAATGCCACCCCCACCTGAGCCTCGCCAGATCAAAAGGCCCCGATTAT
CGCTGAGTTGCATTGTCTGCCGCCGTCGCAAAGTTCGCTGCGGCCGCGAA
CACCCGGAATGCGCCAACTGTGTCCGGATGAAGGAGAATTGTGTCTATAA
GACTATGGTCCACGATGAGTTTACCGGCCGCGTACGCCAAGTATCTCCTC
CTCCTGTGCCCCAGGGTGATAACCCCAATGGACCGGAGTTTTGTGCCAAC
AATTCGGAGGAGCGTACAGGAGGGTTTACTTGGTCGCACTGGATGTCACA
AGGCTCTGGCAATGTATTAGATCTCAGCGATGAGGCTCCCCTTCCGCGTC
CGACCATTTCTCCTGCTTCTGCTCCTCCTCCTCAGAAACGCTCTACCCAA
GCCAAATGCGACGCTAGCTCTGTTCCTCATCCCCACCACTCTTCCACTAT
ACTCACTCCGGCGCCATCAAGCCATCCGCAGGTGGATTTGGTATATCCGA
CAGTACCTTCCTGGGAAGAGGCCATCCAGCTACCCGATAACCATCACGCA
TCCTCTCGGGCAGGAACAAGCAGGACGTCGAGTGTCTCCCAGGATGCCTC
CCCAGCGGTCTCGGAATCAGCCAGAGCGCCTTCTACATCTACAAGTTACA
GTGGTCTACCTAGTCCTGATTATCTGAGTGTACGACGGGGCGCACGTGTG
CGGTATATTGGTCAAGCGTTTTGGGGCCTTGTGGCCGGGAAAGAAACCCT
GAGCGATGATTTCTTCGACTGCAACCGTGATGCCTCAATGGAACAGTCTC
TGACACATATATCCTCCTTGGGGATGTTCAATCTATTACGGTCCCTACCT
ACCAAGCCCGTGAGCGATGCCCTCCTCGATGCCTTCTTCTTCGCGGTGTG
GCCGCTTTCTCCTCTGGTGCATGGCCCGACTCTACGGGCGGACTACGATA
ATTTTTGGGAATGGTGTCGCAACAGCGATAGAGCGTTACCCCCAGAAAAG
GTCCGCGATGACCCAACCTTTCTCTGCCTTCTCTTTGCCATCCTGTATTG
TGGCGCATCCGCTGCACCACCGACCAGCTGGGCATGCACCAATCTGCAGA
GCCTGCGGAAGGAAACGACCATCAAGCACTTGAAGTCGGCCTATACGACA
AGTCTGTCTCTATGCCAGCATCTCGAACACCCGACATTGAACACACTAGT
GTCTACATTGCTGACTGCACCGTTCTTGGACAGAGATGTTGCGCCGATGC
GCAATATGGTCTCCGTCAGCACAACAGTCCGCATCGCCCAGAGTATGGGA
TTGCATCGAGAAGGAACTTGGTCATCTTCATTGAGCCCCGTAGATCGGGA
AATTCGTCGCCGGGCCTGGTGGTATATCATTGGGCTTGACGTACAGTCCA
GCATATCCACAGGCCTACCCCCGTGCTACGCTACCGAGGCGCTAGATATA
GTCAGCATGATAGCTGATACACGCGATGAAGATATCGGGGACCTTTCTAA
TCATCGCTCCCCGGAACCAGTCCCTCGTCCTTCGGAGCAGTCCTTAGCCG
TGATACTCGCCATAGCGCGCTCTGAAACGGCGCGTCTGCAGTCAAAGATC
GTGTCGCGCCTGCAAAATGGAAGACGTCTAGCTCAGACTGAACTTACTGA
GCTTGTGACGTCGGCGAAAAAGCTGCAACAGAAGCTTGATACCTTGATTG
CCCGTGTCCCTTCACAAGGGATTCCTGAAAAAGGATTTATCCCCTCCCGC
CTAGCCAAAGCATCTCCACTCTATCAAACCCCTGCCTTCTCCCCCTACGT
ATGGTTTTGTTACCGACACTACGGACCTCTTCAATGTGTGTTTCTTATCC
TCGTGTACCTACATACCTTTCCGGAATCAGGTGACATCGTGCTGGCTCGA
TATTGCATCGATGAAATCATCGACCACACTGTATCCCATTACCAAGTCCC
GCAGGATTCATTCGGAGCAACTCGTGCAGACAATTCGGAATCCGATGAAG
GCGCAACGGAGGACCAAATACCCCTGGCTATTCAGGTTCTTGTTGACCTC
CACAACCGACTGCAATCGCACCCGAGGTCTGATAACCAAACGACTGACAG
GTTGGATGGAAATGAATACCAGTTCTCCCCATACTCCCTCGAACTTGGAA
TTCAGGGTACTGAGGAGGACACAATAGACAAGAGCATCTTCTCCTTGCCG
TCTTTGTCATCTTCGTCATCCAGAACCCACATCCACCGCAATCAAGAAGC
CCCTTCTACGACTACTGCACCCCAAATGCCTTCTGGCACCAAACATGGAC
CACCGAGTAGCGTGTTTGTCGCAGACAGCGACGGTGGCTCGGACCTGGAC
ATTCTTGCCAGTCTCTCTGATTTTGAGACGTGGTCATCCTCGTTGGTTGT
GGACCCAAGTGATATTCTCGCACACCCTACTTCGATGGCACCACACCATC
CCGTTTGAATGCCACCCCCACCTGAGCCTCGCCAGATCAAAAGGCCCCGA
TTATCGCTGAGTTGCATTGTCTGCCGCCGTCGCAAAGTTCGCTGCGGCCG
CGAACACCCGGAATGCGCCAACTGTGTCCGGATGAAGGAGAATTGTGTCT
ATAAGACTATGGTCCACGATGAGTTTACCGGCCGCGTACGCCAAGTATCT
CCTCCTCCTGTGCCCCAGGGTGATAACCCCAATGGACCGGAGTTTTGTGC
CAACAATTCGGAGGAGCGTACAGGAGGGTTTACTTGGTCGCACTGGATGT
CACAAGGCTCTGGCAATGTATTAGATCTCAGCGATGAGGCTCCCCTTCCG
CGTCCGACCATTTCTCCTGCTTCTGCTCCTCCTCCTCAGAAACGCTCTAC
CCAAGCCAAATGCGACGCTAGCTCTGTTCCTCATCCCCACCACTCTTCCA
CTATACTCACTCCGGCGCCATCAAGCCATCCGCAGGTGGATTTGGTATAT
CCGACAGTACCTTCCTGGGAAGAGGCCATCCAGCTACCCGATAACCATCA
CGCATCCTCTCGGGCAGGAACAAGCAGGACGTCGAGTGTCTCCCAGGATG
CCTCCCCAGCGGTCTCGGAATCAGCCAGAGCGCCTTCTACATCTACAAGT
TACAGTGGTCTACCTAGTCCTGATTATCTGAGTGTACGACGGGGCGCACG
TGTGCGGTATATTGGTCAAGCGTTTTGGGGCCTTGTGGCCGGGAAAGAAA
CCCTGAGCGATGATTTCTTCGACTGCAACCGTGATGCCTCAATGGAACAG
TCTCTGACACATATATCCTCCTTGGGGATGTTCAATCTATTACGGTCCCT
ACCTACCAAGCCCGTGAGCGATGCCCTCCTCGATGCCTTCTTCTTCGCGG
TGTGGCCGCTTTCTCCTCTGGTGCATGGCCCGACTCTACGGGCGGACTAC
GATAATTTTTGGGAATGGTGTCGCAACAGCGATAGAGCGTTACCCCCAGA
AAAGGTCCGCGATGACCCAACCTTTCTCTGCCTTCTCTTTGCCATCCTGT
ATTGTGGCGCATCCGCTGCACCACCGACCAGCTGGGCATGCACCAATCTG
CAGAGCCTGCGGAAGGAAACGACCATCAAGCACTTGAAGTCGGCCTATAC
GACAAGTCTGTCTCTATGCCAGCATCTCGAACACCCGACATTGAACACAC
TAGTGTCTACATTGCTGACTGCACCGTTCTTGGACAGAGATGTTGCGCCG
ATGCGCAATATGGTCTCCGTCAGCACAACAGTCCGCATCGCCCAGAGTAT
GGGATTGCATCGAGAAGGAACTTGGTCATCTTCATTGAGCCCCGTAGATC
GGGAAATTCGTCGCCGGGCCTGGTGGTATATCATTGGGCTTGACGTACAG
TCCAGCATATCCACAGGCCTACCCCCGTGCTACGCTACCGAGGCGCTAGA
TATAGTCAGCATGATAGCTGATACACGCGATGAAGATATCGGGGACCTTT
CTAATCATCGCTCCCCGGAACCAGTCCCTCGTCCTTCGGAGCAGTCCTTA
GCCGTGATACTCGCCATAGCGCGCTCTGAAACGGCGCGTCTGCAGTCAAA
GATCGTGTCGCGCCTGCAAAATGGAAGACGTCTAGCTCAGACTGAACTTA
CTGAGCTTGTGACGTCGGCGAAAAAGCTGCAACAGAAGCTTGATACCTTG
ATTGCCCGTGTCCCTTCACAAGGGATTCCTGAAAAAGGATTTATCCCCTC
CCGCCTAGCCAAAGCATCTCCACTCTATCAAACCCCTGCCTTCTCCCCCT
ACGTATGGTTTTGTTACCGACACTACGGACCTCTTCAATGTGTGTTTCTT
ATCCTCGTGTACCTACATACCTTTCCGGAATCAGGTGACATCGTGCTGGC
TCGATATTGCATCGATGAAATCATCGACCACACTGTATCCCATTACCAAG
TCCCGCAGGATTCATTCGGAGCAACTCGTGCAGACAATTCGGAATCCGAT
GAAGGCGCAACGGAGGACCAAATACCCCTGGCTATTCAGGTTCTTGTTGA
CCTCCACAACCGACTGCAATCGCACCCGAGGTCTGATAACCAAACGACTG
ACAGGTTGGATGGAAATGAATACCAGTTCTCCCCATACTCCCTCGAACTT
GGAATTCAGGGTACTGAGGAGGACACAATAGACAAGAGCATCTTCTCCTT
GCCGTCTTTGTCATCTTCGTCATCCAGAACCCACATCCACCGCAATCAAG
AAGCCCCTTCTACGACTACTGCACCCCAAATGCCTTCTGGCACCAAACAT
GGACCACCGAGTAGCGTGTTTGTCGCAGACAGCGACGGTGGCTCGGACCT
GGACATTCTTGCCAGTCTCTCTGATTTTGAGACGTGGTCATCCTCGTTGG
TTGTGGACCCAAGTGATATTCTCGCACACCCTACTTCGATGGCACCACAC
CATCCCGTTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000121.1 |
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | InterPro:IPR007219 |
| DBxref | PFAM:PF00172 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000012.1 | supercontig | ACJE01000012.1:25033..27843 + |
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