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ASPNIDRAFT_45120-T1, ASPNIDRAFT_45120-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_45120-T1
Unique NameASPNIDRAFT_45120-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000012.1:521157..522383+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_45120-T1 ID=ASPNIDRAFT_45120-T1|Name=ASPNIDRAFT_45120-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1227bp|location=Sequence derived from alignment at ACJE01000012.1:521157..522383+ (Aspergillus niger ATCC 1015)
ATGGCTGAAGCAACACCCCCAACTGAAACAGTAACCCCTCCTACGGAGGA
GGTCGTCGAAGACCAACAACAAACCCAGCAACAAGAAAACGAAACAACAG
AAGAAACCACCGCCCTAACAACCACCGCCGACGGCGCCGTCGAACCGCAA
AAGAAGACCAAAAAGATAATCCGACGCAAGCGCCGCCCAGCACGCCCACA
AGTCGACCCAGCGACAATCAAATCCGAGCCCCCACCCCAAGTCGGCACAA
TCTTCAACATCTGGTACAACAAATGGAGCGGCGGTGACCGCGAAAACTCC
TACCTAAGCAAGACGGCAGCACCCTCACGATGCAACATCGCGCGCGACAG
CGGCTACACACGGGCCGATAAAGTGCCCGGGTCATACTTCTGCCTGTTCT
TCGCGCGCGGGATATGCCCGCGCGGCGCAGAGTGCGAATACCTGCACCGT
TTACCAACACTGCACGACATATTCAACCCGAACGTGGATTGCTTTGGACG
GGACAAGTTCAGTGACTATCGGGATGATATGGGTGGTGTAGGATCATTCA
TGAGACAGAATCGCACGTTGTATGTGGGACGGATTCATGTGACGGACTCG
ATTGAGGAGGTGGTGGCGAGGAATTTCCAGGAATGGGGACAGATTGATCG
GATTCGGGTGCTTACGTCCCGGGGTGTTGCGTTCGTGACGTATACAAATG
AGGCGAATGCGCAGTTTGCGAAGGAGGCGATGGCGCATCAGAGTTTGGAT
CATAATGAGATTCTGAATGTGAGGTGGGCTACGGTCGATCCGAATCCGTT
GGCGCAGAAGAGGGAGGCGAGACGGCTGGAAGAGCAGGCTGCTGAGGCGG
TTAGGAGGGCGTTGCCGGCGGAGTTTGTGGCTGAGTTGGAAGGCAGGGAT
CCTGAGGCCAAGAAGAGGAAGAAGATTGAGGGGAGTTATGGGTTGCAGGG
GTATGAGCCGCCGGATGAGGTGTGGTTCTCGCGTGCGAAGGAGTTGGAGG
ATGCGAATGCGATTGCGCAATTGGAGGCTCCAGAGCAGCCGCTGATGATT
GAGGGTGCCTCTGAGACTGCTGCTGCTGCTCCGCAGGAGGAACAGGCCGG
AGGGATCTTCTCCAGCTCTGCTGTTGCGGCGTTGAAGGGCCTGGCTGGCG
GTGCTGTCACGACGCAGCAGGCGCCTAAAGCTGCTGGACCTCTGGTGGCG
TACGGGAGTGACGATGATAGCGAGTAA
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Coding sequence (CDS) from alignment at ACJE01000012.1:521157..522383+

>ASPNIDRAFT_45120-T1 ID=ASPNIDRAFT_45120-T1|Name=ASPNIDRAFT_45120-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1227bp|location=Sequence derived from alignment at ACJE01000012.1:521157..522383+ (Aspergillus niger ATCC 1015)
ATGGCTGAAGCAACACCCCCAACTGAAACAGTAACCCCTCCTACGGAGGA
GGTCGTCGAAGACCAACAACAAACCCAGCAACAAGAAAACGAAACAACAG
AAGAAACCACCGCCCTAACAACCACCGCCGACGGCGCCGTCGAACCGCAA
AAGAAGACCAAAAAGATAATCCGACGCAAGCGCCGCCCAGCACGCCCACA
AGTCGACCCAGCGACAATCAAATCCGAGCCCCCACCCCAAGTCGGCACAA
TCTTCAACATCTGGTACAACAAATGGAGCGGCGGTGACCGCGAAAACTCC
TACCTAAGCAAGACGGCAGCACCCTCACGATGCAACATCGCGCGCGACAG
CGGCTACACACGGGCCGATAAAGTGCCCGGGTCATACTTCTGCCTGTTCT
TCGCGCGCGGGATATGCCCGCGCGGCGCAGAGTGCGAATACCTGCACCGT
TTACCAACACTGCACGACATATTCAACCCGAACGTGGATTGCTTTGGACG
GGACAAGTTCAGTGACTATCGGGATGATATGGGTGGTGTAGGATCATTCA
TGAGACAGAATCGCACGTTGTATGTGGGACGGATTCATGTGACGGACTCG
ATTGAGGAGGTGGTGGCGAGGAATTTCCAGGAATGGGGACAGATTGATCG
GATTCGGGTGCTTACGTCCCGGGGTGTTGCGTTCGTGACGTATACAAATG
AGGCGAATGCGCAGTTTGCGAAGGAGGCGATGGCGCATCAGAGTTTGGAT
CATAATGAGATTCTGAATGTGAGGTGGGCTACGGTCGATCCGAATCCGTT
GGCGCAGAAGAGGGAGGCGAGACGGCTGGAAGAGCAGGCTGCTGAGGCGG
TTAGGAGGGCGTTGCCGGCGGAGTTTGTGGCTGAGTTGGAAGGCAGGGAT
CCTGAGGCCAAGAAGAGGAAGAAGATTGAGGGGAGTTATGGGTTGCAGGG
GTATGAGCCGCCGGATGAGGTGTGGTTCTCGCGTGCGAAGGAGTTGGAGG
ATGCGAATGCGATTGCGCAATTGGAGGCTCCAGAGCAGCCGCTGATGATT
GAGGGTGCCTCTGAGACTGCTGCTGCTGCTCCGCAGGAGGAACAGGCCGG
AGGGATCTTCTCCAGCTCTGCTGTTGCGGCGTTGAAGGGCCTGGCTGGCG
GTGCTGTCACGACGCAGCAGGCGCCTAAAGCTGCTGGACCTCTGGTGGCG
TACGGGAGTGACGATGATAGCGAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0046872metal ion binding
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CWC2ASPNIDRAFT_45120Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_45120-T1.exon1ASPNIDRAFT_45120-T1.exon1Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_45120-T1.cdsASPNIDRAFT_45120-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_45120-T1ASPNIDRAFT_45120-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036855
DBxrefInterPro:IPR035979
DBxrefInterPro:IPR034181
DBxrefInterPro:IPR000571
DBxrefInterPro:IPR032297
DBxrefInterPro:IPR012677
DBxrefInterPro:IPR000504
DBxrefPFAM:PF00642
DBxrefPFAM:PF16131
DBxrefPFAM:PF00076
ProductPre-mRNA-splicing factor
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000012.1supercontigACJE01000012.1:521157..522383 +
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