You are here

Home

ASPNIDRAFT_45718-T1, ASPNIDRAFT_45718-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_45718-T1
Unique NameASPNIDRAFT_45718-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000015.1:414813..415864-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_45718-T1 ID=ASPNIDRAFT_45718-T1|Name=ASPNIDRAFT_45718-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1052bp|location=Sequence derived from alignment at ACJE01000015.1:414813..415864- (Aspergillus niger ATCC 1015)
ATGCCGACCGCTCGATACTTCGCTCAAGCTCCCCCCTTTCCGGCTAATAC
ACCGATCATTAACCTTCCCATTCTCACATTTTCTCAACTACAGTCTGGCA
ACCCAATCGAAGCAGAGAAATTATTTGCCGCCTGCCGCGAATGGGGGTTC
TTCCTTCTCGACCTACACGACTCCGCAGACGGCAGGACTCTCCTTCACGA
TGCAGAATCTATGTTCGATCTCAATACCGAACTCTTCTCGCTCGACCAGT
CAACACTCGACCAATACGCCTACAACGCGCCCAAAGACTTAACAGGCTAT
AAACGGATGGGCGCACTAAGAACCGACGACGGCAAGCTCGATCACATGCA
CCTCTACTCCATAAACCAGGACGATATCCTGGGTAACCGTCCTCCCCGCA
CCAACGCGCCCCCGATCGAGGCGCATAGACCCCAGATCCAGGCGTTCATC
CGCCACGCTTCGTCGGCCTTGGATGTAATTCTTACAACATTGGACAAGCA
GCTTGGCCTCGAGCGCGATACCCTAAGCGAACTCAGTCCACTGGATCATG
AGTCCGAGACTTCTGTCCGCTTGCTATGCAGTCCTCCCCACACATCCGGT
GATGCGGAACACGAGCGCATCTCGTTAGGCGGACACACGGATATCGGCAC
ATTGACGCTGCTATTCCACGTTATTGGTGGTCTGCAAATCGTCCCCGCGG
GGCTCGAGAATAACATGGAGAATTGGCGTTTTGTTCAGCCCCTGCCAGGT
TGTGCGTTGGTCAATATGGGAATACGCTGGTTGAATGGACTGGTCAGCTA
CTGCGGAGTTCCTTGCATAGGGTTTTAGCTGCTCCCGGGGAGCAAGCATT
CGTGCCGAGGCGGAGTGTGGCGTATTTGGTGAGGCCGGCCAAGTCAGCGT
CCATGCGGAGAATTCGTGGAGGGAAGATACCGGCGGTAGCTGAGGGAGAA
GAGGAGACGAGGCCCGTAGATGAATGGGCGGCTTGGAGGTCGAAGCAGAT
TATGTTGGGGTTGTTGAAGCCGCAGACGAGAGGGGGTGTTCTTGATGTGT
AG
back to top

Coding sequence (CDS) from alignment at ACJE01000015.1:414813..415864-

>ASPNIDRAFT_45718-T1 ID=ASPNIDRAFT_45718-T1|Name=ASPNIDRAFT_45718-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1950bp|location=Sequence derived from alignment at ACJE01000015.1:414813..415864- (Aspergillus niger ATCC 1015)
CTGCTCCCGGGGAGCAAGCATTCGTGCCGAGGCGGAGTGTGGCGTATTTG
GTGAGGCCGGCCAAGTCAGCGTCCATGCGGAGAATTCGTGGAGGGAAGAT
ACCGGCGGTAGCTGAGGGAGAAGAGGAGACGAGGCCCGTAGATGAATGGG
CGGCTTGGAGGTCGAAGCAGATTATGTTGGGGTTGTTGAAGCCGCAGACG
AGAGGGGGTGTTCTTGATGTGTAGATGCCGACCGCTCGATACTTCGCTCA
AGCTCCCCCCTTTCCGGCTAATACACCGATCATTAACCTTCCCATTCTCA
CATTTTCTCAACTACAGTCTGGCAACCCAATCGAAGCAGAGAAATTATTT
GCCGCCTGCCGCGAATGGGGGTTCTTCCTTCTCGACCTACACGACTCCGC
AGACGGCAGGACTCTCCTTCACGATGCAGAATCTATGTTCGATCTCAATA
CCGAACTCTTCTCGCTCGACCAGTCAACACTCGACCAATACGCCTACAAC
GCGCCCAAAGACTTAACAGGCTATAAACGGATGGGCGCACTAAGAACCGA
CGACGGCAAGCTCGATCACATGCACCTCTACTCCATAAACCAGGACGATA
TCCTGGGTAACCGTCCTCCCCGCACCAACGCGCCCCCGATCGAGGCGCAT
AGACCCCAGATCCAGGCGTTCATCCGCCACGCTTCGTCGGCCTTGGATGT
AATTCTTACAACATTGGACAAGCAGCTTGGCCTCGAGCGCGATACCCTAA
GCGAACTCAGTCCACTGGATCATGAGTCCGAGACTTCTGTCCGCTTGCTA
TGCAGTCCTCCCCACACATCCGGTGATGCGGAACACGAGCGCATCTCGTT
AGGCGGACACACGGATATCGGCACATTGACGCTGCTATTCCACGTTATTG
GTGGTCTGCAAATCGTCCCCGCGGGGCTCGAGAATAACATGGAGAATTGG
CGTTTTGTTCAGCCCCTGCCAGGTTCTGCTCCCGGGGAGCAAGCATTCGT
GCCGAGGCGGAGTGTGGCGTATTTGGTGAGGCCGGCCAAGTCAGCGTCCA
TGCGGAGAATTCGTGGAGGGAAGATACCGGCGGTAGCTGAGGGAGAAGAG
GAGACGAGGCCCGTAGATGAATGGGCGGCTTGGAGGTCGAAGCAGATTAT
GTTGGGGTTGTTGAAGCCGCAGACGAGAGGGGGTGTTCTTGATGTGTAGA
TGCCGACCGCTCGATACTTCGCTCAAGCTCCCCCCTTTCCGGCTAATACA
CCGATCATTAACCTTCCCATTCTCACATTTTCTCAACTACAGTCTGGCAA
CCCAATCGAAGCAGAGAAATTATTTGCCGCCTGCCGCGAATGGGGGTTCT
TCCTTCTCGACCTACACGACTCCGCAGACGGCAGGACTCTCCTTCACGAT
GCAGAATCTATGTTCGATCTCAATACCGAACTCTTCTCGCTCGACCAGTC
AACACTCGACCAATACGCCTACAACGCGCCCAAAGACTTAACAGGCTATA
AACGGATGGGCGCACTAAGAACCGACGACGGCAAGCTCGATCACATGCAC
CTCTACTCCATAAACCAGGACGATATCCTGGGTAACCGTCCTCCCCGCAC
CAACGCGCCCCCGATCGAGGCGCATAGACCCCAGATCCAGGCGTTCATCC
GCCACGCTTCGTCGGCCTTGGATGTAATTCTTACAACATTGGACAAGCAG
CTTGGCCTCGAGCGCGATACCCTAAGCGAACTCAGTCCACTGGATCATGA
GTCCGAGACTTCTGTCCGCTTGCTATGCAGTCCTCCCCACACATCCGGTG
ATGCGGAACACGAGCGCATCTCGTTAGGCGGACACACGGATATCGGCACA
TTGACGCTGCTATTCCACGTTATTGGTGGTCTGCAAATCGTCCCCGCGGG
GCTCGAGAATAACATGGAGAATTGGCGTTTTGTTCAGCCCCTGCCAGGTT
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_45718ASPNIDRAFT_45718Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_45718-T1ASPNIDRAFT_45718-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_45718-T1.cdsASPNIDRAFT_45718-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_45718-T1.exon2ASPNIDRAFT_45718-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_45718-T1.exon1ASPNIDRAFT_45718-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR027443
DBxrefInterPro:IPR026992
DBxrefPFAM:PF14226
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000015.1supercontigACJE01000015.1:414813..415864 -
Powered by Drupal