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ASPNIDRAFT_46331-T1, ASPNIDRAFT_46331-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_46331-T1
Unique NameASPNIDRAFT_46331-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:3186286..3188631+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_46331-T1 ID=ASPNIDRAFT_46331-T1|Name=ASPNIDRAFT_46331-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2346bp|location=Sequence derived from alignment at ACJE01000004.1:3186286..3188631+ (Aspergillus niger ATCC 1015)
ATGGAGCCGACAACCGCTCAGGAACAGCTGCCCGCTCCAGAGGCTAATGC
GCCCAAGCGTGATCCGGAGAATGGCGATGCCGCTGCAGACCACCAGGCCC
AGGAGCCACCCTCGAAGAAAGCCAGACTCGATGATTCGGCGGATTCTAAC
GGACAGACGGCTGATGCGCCCGCCCCGCGTATGAAGGGCGTTGCTCCTAT
CAAGCCCGAGTATGTGATTGATCTAAATCTGTTTGCGATGCGCCCGCTCT
AACCGACTTCCTCTGCTAGGTTTATTATCGACCAACAACCCACGAGAGGC
CAGACCGCTTCCGATGCCAATGCTGACGATGCTGCGGAAGCTGCACACCA
CGACGGGCGCGCCGATGAGCAGAATGGAAAGAAGAAAAAGAAGAAGACTG
GTCAGAATACGAACCGCACGTTTGGTCGATCCGAGGATGCGAAAGGATTG
TGCTCTAGTGTCAACTTCAGGCCTGAATTTTCTCCTGCCGAGTGCACTTT
CGGTGAAAAGTGTCGGTACGAGCATGACCTGCGCACATACTTGAAGGAGC
ATAAGCGGGAAGATCTTACGACGTTCAATGGCATGTGTCCTGTCTGGGAT
GTCCACGGAAAGTGCTTCGTGGGCTGGAAATGTCGTTTTGTCGGTTCACA
CTCGGAGGAGCGAGAGACTGCCGATGGAAGGAAAGAGTTGGTTCTTATTG
AGGATGAGGAGCGCAAGAAGAAGGTTCAGCGGCTTGTTCCCTTTGCTGGA
GAGGATGGGGCTGTGAATGTTGCTTCGATGGAGGATAAGATTGCCTTGGC
GAGGAGGAAGATGGACTTCCCAAGAGCTGGGCCGTATAGTGCTTGGCTGG
AAAACACATCCAGGACCATTGAGAAGGAGCTCCACAAACGGCATCGTGCT
GCGCCCGTAGGAGCTGAAACCAAGGATGGAGAGTCTAAGGATGCAGAATC
TAAGGATGCAGATAGCAAGGACGAAAAGGAGGAGAACCGGGCTATGTACG
TTGAGCCGCCATTCATGCCATCAGAGAAGCGCCGACTGTACTTTGGACCC
GAAACACCGGCACTGGCGCCTTTGACTACCCAAGGCAATATGCCTTTCCG
AAGACTTTGCGTCGAGCTTGGCGCACAATTTACCTATTCTGAGATGGCCA
TGAGCTTGCCCTTGATCCAGGGTAACAAGTCGGAGTGGGCCTTAATGCGA
GCCCATGAGTCGGAGATGCTCCCTCCCACGATGCTGCCCGGGGCAGACAT
CGTGCAGGGCTATGACAACTCCAAGGACATGAAGTTTGGTGCTCAGATTG
CAGCAAACAAGCCCTGGCAGGCGTTCAAGGCTACAGAGGCGCTGGCTAAA
GTTACTCCAAACCTGCGTGTCATCGATCTGAACTGTGGCTGCCCGATTGA
CCTCGTCTTCAAGGATGGTGCTGGCTCTGCTCTTCTGGAGCACCCGTCGA
AGCTCGAGAAGATCATTCGTGGCATGAACACTGTTTCGGATCAGATTCCT
ATCACGGTCAAGATCCGTATGGGAACGAAGGACAACAATCCGAACGCCTT
GAAACTGACGGAGCGTTTGCTGCTTGGGGGCTACGAAACCAGTCTGCTTC
ATCACGACGGCGCCGCAGGTGCAGCGGCTATCACTCTTCACGGCCGTAGC
AGACAGCAGCGTTACACCAGACAAGCTGATTGGGAATACATCTCCGAATG
TGCCGCCTTGATCAAGCGCCTGAACGAGAAGACTGACGCGGTGACGGATA
CCATCCGGGAGCCTGACGCCCGGACGCAGCCAAACGGCGGGAAGGTTTAC
TTCCTGGGTAACGGTGACTGCTATTCTCATGTTGACTACGATAACCACAT
CAACAATGCTGGCGTTGATGCTGTTATGCTTGGTCGCGGTCCTCTGATCA
AGCCTTGGCTGTTCGAGGAAATTCAGGCGGGCCAGTACCTTGACAAGTCT
GCTACGGAACGTTTGGCAATGATTGAGAAGTTCTGTAAGTATGGTCTGGA
GGCATGGGGATCCGATGAGCACGGTGTTGGTACGACTAGACGCTTCTTGA
TGGAATGGCTGAGCTTCACTCGTCGCTATGTACCTATCGGGTTGCTCGAG
CATCTTCCCCCCTACATCAACGACCGGCCCCCGGCTTTCAGAGGCCGGAA
TGAGCTTGAGACACTGCTGGCCAGTGCCAACTACAAGGATTGGCTCAAGA
TCTCGTAAGTACCTTCTCCTGACCGGCTCACTCTTTCGAACTCATTCTAA
CAGCCTTCTAGGGAGATGTTCCTCGGACCGGCTCATAAGGACTTCAAGTT
CGAGCCCAAGCACAAGTCCAACTCGTATGACGAAGCGGAGGGTTAA
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Coding sequence (CDS) from alignment at ACJE01000004.1:3186286..3188631+

>ASPNIDRAFT_46331-T1 ID=ASPNIDRAFT_46331-T1|Name=ASPNIDRAFT_46331-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=6687bp|location=Sequence derived from alignment at ACJE01000004.1:3186286..3188631+ (Aspergillus niger ATCC 1015)
ATGGAGCCGACAACCGCTCAGGAACAGCTGCCCGCTCCAGAGGCTAATGC
GCCCAAGCGTGATCCGGAGAATGGCGATGCCGCTGCAGACCACCAGGCCC
AGGAGCCACCCTCGAAGAAAGCCAGACTCGATGATTCGGCGGATTCTAAC
GGACAGACGGCTGATGCGCCCGCCCCGCGTATGAAGGGCGTTGCTCCTAT
CAAGCCCGAGTTTATTATCGACCAACAACCCACGAGAGGCCAGACCGCTT
CCGATGCCAATGCTGACGATGCTGCGGAAGCTGCACACCACGACGGGCGC
GCCGATGAGCAGAATGGAAAGAAGAAAAAGAAGAAGACTGGTCAGAATAC
GAACCGCACGTTTGGTCGATCCGAGGATGCGAAAGGATTGTGCTCTAGTG
TCAACTTCAGGCCTGAATTTTCTCCTGCCGAGTGCACTTTCGGTGAAAAG
TGTCGGTACGAGCATGACCTGCGCACATACTTGAAGGAGCATAAGCGGGA
AGATCTTACGACGTTCAATGGCATGTGTCCTGTCTGGGATGTCCACGGAA
AGTGCTTCGTGGGCTGGAAATGTCGTTTTGTCGGTTCACACTCGGAGGAG
CGAGAGACTGCCGATGGAAGGAAAGAGTTGGTTCTTATTGAGGATGAGGA
GCGCAAGAAGAAGGTTCAGCGGCTTGTTCCCTTTGCTGGAGAGGATGGGG
CTGTGAATGTTGCTTCGATGGAGGATAAGATTGCCTTGGCGAGGAGGAAG
ATGGACTTCCCAAGAGCTGGGCCGTATAGTGCTTGGCTGGAAAACACATC
CAGGACCATTGAGAAGGAGCTCCACAAACGGCATCGTGCTGCGCCCGTAG
GAGCTGAAACCAAGGATGGAGAGTCTAAGGATGCAGAATCTAAGGATGCA
GATAGCAAGGACGAAAAGGAGGAGAACCGGGCTATGTACGTTGAGCCGCC
ATTCATGCCATCAGAGAAGCGCCGACTGTACTTTGGACCCGAAACACCGG
CACTGGCGCCTTTGACTACCCAAGGCAATATGCCTTTCCGAAGACTTTGC
GTCGAGCTTGGCGCACAATTTACCTATTCTGAGATGGCCATGAGCTTGCC
CTTGATCCAGGGTAACAAGTCGGAGTGGGCCTTAATGCGAGCCCATGAGT
CGGAGATGCTCCCTCCCACGATGCTGCCCGGGGCAGACATCGTGCAGGGC
TATGACAACTCCAAGGACATGAAGTTTGGTGCTCAGATTGCAGCAAACAA
GCCCTGGCAGGCGTTCAAGGCTACAGAGGCGCTGGCTAAAGTTACTCCAA
ACCTGCGTGTCATCGATCTGAACTGTGGCTGCCCGATTGACCTCGTCTTC
AAGGATGGTGCTGGCTCTGCTCTTCTGGAGCACCCGTCGAAGCTCGAGAA
GATCATTCGTGGCATGAACACTGTTTCGGATCAGATTCCTATCACGGTCA
AGATCCGTATGGGAACGAAGGACAACAATCCGAACGCCTTGAAACTGACG
GAGCGTTTGCTGCTTGGGGGCTACGAAACCAGTCTGCTTCATCACGACGG
CGCCGCAGGTGCAGCGGCTATCACTCTTCACGGCCGTAGCAGACAGCAGC
GTTACACCAGACAAGCTGATTGGGAATACATCTCCGAATGTGCCGCCTTG
ATCAAGCGCCTGAACGAGAAGACTGACGCGGTGACGGATACCATCCGGGA
GCCTGACGCCCGGACGCAGCCAAACGGCGGGAAGGTTTACTTCCTGGGTA
ACGGTGACTGCTATTCTCATGTTGACTACGATAACCACATCAACAATGCT
GGCGTTGATGCTGTTATGCTTGGTCGCGGTCCTCTGATCAAGCCTTGGCT
GTTCGAGGAAATTCAGGCGGGCCAGTACCTTGACAAGTCTGCTACGGAAC
GTTTGGCAATGATTGAGAAGTTCTGTAAGTATGGTCTGGAGGCATGGGGA
TCCGATGAGCACGGTGTTGGTACGACTAGACGCTTCTTGATGGAATGGCT
GAGCTTCACTCGTCGCTATGTACCTATCGGGTTGCTCGAGCATCTTCCCC
CCTACATCAACGACCGGCCCCCGGCTTTCAGAGGCCGGAATGAGCTTGAG
ACACTGCTGGCCAGTGCCAACTACAAGGATTGGCTCAAGATCTCGGAGAT
GTTCCTCGGACCGGCTCATAAGGACTTCAAGTTCGAGCCCAAGCACAAGT
CCAACTCGTATGACGAAGCGGAGGGTTAAATGGAGCCGACAACCGCTCAG
GAACAGCTGCCCGCTCCAGAGGCTAATGCGCCCAAGCGTGATCCGGAGAA
TGGCGATGCCGCTGCAGACCACCAGGCCCAGGAGCCACCCTCGAAGAAAG
CCAGACTCGATGATTCGGCGGATTCTAACGGACAGACGGCTGATGCGCCC
GCCCCGCGTATGAAGGGCGTTGCTCCTATCAAGCCCGAGTTTATTATCGA
CCAACAACCCACGAGAGGCCAGACCGCTTCCGATGCCAATGCTGACGATG
CTGCGGAAGCTGCACACCACGACGGGCGCGCCGATGAGCAGAATGGAAAG
AAGAAAAAGAAGAAGACTGGTCAGAATACGAACCGCACGTTTGGTCGATC
CGAGGATGCGAAAGGATTGTGCTCTAGTGTCAACTTCAGGCCTGAATTTT
CTCCTGCCGAGTGCACTTTCGGTGAAAAGTGTCGGTACGAGCATGACCTG
CGCACATACTTGAAGGAGCATAAGCGGGAAGATCTTACGACGTTCAATGG
CATGTGTCCTGTCTGGGATGTCCACGGAAAGTGCTTCGTGGGCTGGAAAT
GTCGTTTTGTCGGTTCACACTCGGAGGAGCGAGAGACTGCCGATGGAAGG
AAAGAGTTGGTTCTTATTGAGGATGAGGAGCGCAAGAAGAAGGTTCAGCG
GCTTGTTCCCTTTGCTGGAGAGGATGGGGCTGTGAATGTTGCTTCGATGG
AGGATAAGATTGCCTTGGCGAGGAGGAAGATGGACTTCCCAAGAGCTGGG
CCGTATAGTGCTTGGCTGGAAAACACATCCAGGACCATTGAGAAGGAGCT
CCACAAACGGCATCGTGCTGCGCCCGTAGGAGCTGAAACCAAGGATGGAG
AGTCTAAGGATGCAGAATCTAAGGATGCAGATAGCAAGGACGAAAAGGAG
GAGAACCGGGCTATGTACGTTGAGCCGCCATTCATGCCATCAGAGAAGCG
CCGACTGTACTTTGGACCCGAAACACCGGCACTGGCGCCTTTGACTACCC
AAGGCAATATGCCTTTCCGAAGACTTTGCGTCGAGCTTGGCGCACAATTT
ACCTATTCTGAGATGGCCATGAGCTTGCCCTTGATCCAGGGTAACAAGTC
GGAGTGGGCCTTAATGCGAGCCCATGAGTCGGAGATGCTCCCTCCCACGA
TGCTGCCCGGGGCAGACATCGTGCAGGGCTATGACAACTCCAAGGACATG
AAGTTTGGTGCTCAGATTGCAGCAAACAAGCCCTGGCAGGCGTTCAAGGC
TACAGAGGCGCTGGCTAAAGTTACTCCAAACCTGCGTGTCATCGATCTGA
ACTGTGGCTGCCCGATTGACCTCGTCTTCAAGGATGGTGCTGGCTCTGCT
CTTCTGGAGCACCCGTCGAAGCTCGAGAAGATCATTCGTGGCATGAACAC
TGTTTCGGATCAGATTCCTATCACGGTCAAGATCCGTATGGGAACGAAGG
ACAACAATCCGAACGCCTTGAAACTGACGGAGCGTTTGCTGCTTGGGGGC
TACGAAACCAGTCTGCTTCATCACGACGGCGCCGCAGGTGCAGCGGCTAT
CACTCTTCACGGCCGTAGCAGACAGCAGCGTTACACCAGACAAGCTGATT
GGGAATACATCTCCGAATGTGCCGCCTTGATCAAGCGCCTGAACGAGAAG
ACTGACGCGGTGACGGATACCATCCGGGAGCCTGACGCCCGGACGCAGCC
AAACGGCGGGAAGGTTTACTTCCTGGGTAACGGTGACTGCTATTCTCATG
TTGACTACGATAACCACATCAACAATGCTGGCGTTGATGCTGTTATGCTT
GGTCGCGGTCCTCTGATCAAGCCTTGGCTGTTCGAGGAAATTCAGGCGGG
CCAGTACCTTGACAAGTCTGCTACGGAACGTTTGGCAATGATTGAGAAGT
TCTGTAAGTATGGTCTGGAGGCATGGGGATCCGATGAGCACGGTGTTGGT
ACGACTAGACGCTTCTTGATGGAATGGCTGAGCTTCACTCGTCGCTATGT
ACCTATCGGGTTGCTCGAGCATCTTCCCCCCTACATCAACGACCGGCCCC
CGGCTTTCAGAGGCCGGAATGAGCTTGAGACACTGCTGGCCAGTGCCAAC
TACAAGGATTGGCTCAAGATCTCGGAGATGTTCCTCGGACCGGCTCATAA
GGACTTCAAGTTCGAGCCCAAGCACAAGTCCAACTCGTATGACGAAGCGG
AGGGTTAAATGGAGCCGACAACCGCTCAGGAACAGCTGCCCGCTCCAGAG
GCTAATGCGCCCAAGCGTGATCCGGAGAATGGCGATGCCGCTGCAGACCA
CCAGGCCCAGGAGCCACCCTCGAAGAAAGCCAGACTCGATGATTCGGCGG
ATTCTAACGGACAGACGGCTGATGCGCCCGCCCCGCGTATGAAGGGCGTT
GCTCCTATCAAGCCCGAGTTTATTATCGACCAACAACCCACGAGAGGCCA
GACCGCTTCCGATGCCAATGCTGACGATGCTGCGGAAGCTGCACACCACG
ACGGGCGCGCCGATGAGCAGAATGGAAAGAAGAAAAAGAAGAAGACTGGT
CAGAATACGAACCGCACGTTTGGTCGATCCGAGGATGCGAAAGGATTGTG
CTCTAGTGTCAACTTCAGGCCTGAATTTTCTCCTGCCGAGTGCACTTTCG
GTGAAAAGTGTCGGTACGAGCATGACCTGCGCACATACTTGAAGGAGCAT
AAGCGGGAAGATCTTACGACGTTCAATGGCATGTGTCCTGTCTGGGATGT
CCACGGAAAGTGCTTCGTGGGCTGGAAATGTCGTTTTGTCGGTTCACACT
CGGAGGAGCGAGAGACTGCCGATGGAAGGAAAGAGTTGGTTCTTATTGAG
GATGAGGAGCGCAAGAAGAAGGTTCAGCGGCTTGTTCCCTTTGCTGGAGA
GGATGGGGCTGTGAATGTTGCTTCGATGGAGGATAAGATTGCCTTGGCGA
GGAGGAAGATGGACTTCCCAAGAGCTGGGCCGTATAGTGCTTGGCTGGAA
AACACATCCAGGACCATTGAGAAGGAGCTCCACAAACGGCATCGTGCTGC
GCCCGTAGGAGCTGAAACCAAGGATGGAGAGTCTAAGGATGCAGAATCTA
AGGATGCAGATAGCAAGGACGAAAAGGAGGAGAACCGGGCTATGTACGTT
GAGCCGCCATTCATGCCATCAGAGAAGCGCCGACTGTACTTTGGACCCGA
AACACCGGCACTGGCGCCTTTGACTACCCAAGGCAATATGCCTTTCCGAA
GACTTTGCGTCGAGCTTGGCGCACAATTTACCTATTCTGAGATGGCCATG
AGCTTGCCCTTGATCCAGGGTAACAAGTCGGAGTGGGCCTTAATGCGAGC
CCATGAGTCGGAGATGCTCCCTCCCACGATGCTGCCCGGGGCAGACATCG
TGCAGGGCTATGACAACTCCAAGGACATGAAGTTTGGTGCTCAGATTGCA
GCAAACAAGCCCTGGCAGGCGTTCAAGGCTACAGAGGCGCTGGCTAAAGT
TACTCCAAACCTGCGTGTCATCGATCTGAACTGTGGCTGCCCGATTGACC
TCGTCTTCAAGGATGGTGCTGGCTCTGCTCTTCTGGAGCACCCGTCGAAG
CTCGAGAAGATCATTCGTGGCATGAACACTGTTTCGGATCAGATTCCTAT
CACGGTCAAGATCCGTATGGGAACGAAGGACAACAATCCGAACGCCTTGA
AACTGACGGAGCGTTTGCTGCTTGGGGGCTACGAAACCAGTCTGCTTCAT
CACGACGGCGCCGCAGGTGCAGCGGCTATCACTCTTCACGGCCGTAGCAG
ACAGCAGCGTTACACCAGACAAGCTGATTGGGAATACATCTCCGAATGTG
CCGCCTTGATCAAGCGCCTGAACGAGAAGACTGACGCGGTGACGGATACC
ATCCGGGAGCCTGACGCCCGGACGCAGCCAAACGGCGGGAAGGTTTACTT
CCTGGGTAACGGTGACTGCTATTCTCATGTTGACTACGATAACCACATCA
ACAATGCTGGCGTTGATGCTGTTATGCTTGGTCGCGGTCCTCTGATCAAG
CCTTGGCTGTTCGAGGAAATTCAGGCGGGCCAGTACCTTGACAAGTCTGC
TACGGAACGTTTGGCAATGATTGAGAAGTTCTGTAAGTATGGTCTGGAGG
CATGGGGATCCGATGAGCACGGTGTTGGTACGACTAGACGCTTCTTGATG
GAATGGCTGAGCTTCACTCGTCGCTATGTACCTATCGGGTTGCTCGAGCA
TCTTCCCCCCTACATCAACGACCGGCCCCCGGCTTTCAGAGGCCGGAATG
AGCTTGAGACACTGCTGGCCAGTGCCAACTACAAGGATTGGCTCAAGATC
TCGGAGATGTTCCTCGGACCGGCTCATAAGGACTTCAAGTTCGAGCCCAA
GCACAAGTCCAACTCGTATGACGAAGCGGAGGGTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0008033tRNA processing
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0050660flavin adenine dinucleotide binding
GO:0017150tRNA dihydrouridine synthase activity
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
DUS3ASPNIDRAFT_46331Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_46331-T1.exon1ASPNIDRAFT_46331-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_46331-T1.exon2ASPNIDRAFT_46331-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_46331-T1.exon3ASPNIDRAFT_46331-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_46331-T1.cdsASPNIDRAFT_46331-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_46331-T1ASPNIDRAFT_46331-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09261ZPW
DBxrefInterPro:IPR035587
DBxrefInterPro:IPR000571
DBxrefInterPro:IPR018517
DBxrefInterPro:IPR001269
DBxrefInterPro:IPR013785
DBxrefPFAM:PF01207
ProducttRNA-dihydrouridine synthase 3
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:3186286..3188631 +
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