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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000004.1:2368979..2369979- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_46473-T1 ID=ASPNIDRAFT_46473-T1|Name=ASPNIDRAFT_46473-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1001bp|location=Sequence derived from alignment at ACJE01000004.1:2368979..2369979- (Aspergillus niger ATCC 1015)
ATGGACGTTCAGCAGTTGTTCAACGTCAAGGTGCGTACTACGGAGATGCA
GAGTAGAGGGCTCGGACTGTACAGCTGAGCTGAAGATCTAACCATGCGCT
TAGGGCAAAGTCGTGCTGGTCACTGGTGGCGCCAAAGGAATCGGTCGGAT
GATCTCAGAGGGCTTCGTAAAGAACGGCGCCACTGTGTATATCTCGTCGC
GAGATGCCAAGTCTTGCGATAAAGCTGTAAACGAGCTCAATGCACTTGGC
ACGGGTAAGGCGTATGCTATCCCTGCTAATTTCTACCAAGAGGAGGAAGT
CAAAAGATTGGCCGAAGAGATTGCCAAGCGCGAGAGCAGTAAGTCCAGCC
CCTGGAGTGTTGCTCCTTAGAGGAGGGTGGGCGCATAGAGCACTAGATTA
ACACATCCCACAGAGCTGCATGTTCTTGTCAACAACTCTGGGTCCAATTG
GGGTGCCCCGTACGATGAATACCCTTCGTCTGCTTGGACACGAGTTCTCA
CTCTCAATCTTCATCGGGTATTCGACCTCACCAAGCTTCTCACCCCTCTA
CTGGAGAAGGCCGGTTCATCTGGCGACCCGGCTCGCATTATCAACATCGG
TAGCATCGATGGCATAAGGGTTCCAGCTCTGGAAACCTTTGCTTACAGTG
CCAGTAAAGCTGGATTGCACCATTTGAGTCGTGTTTTGGCACACCACCTT
GGAAGACGGAACATCACGTACGTGTAAACCCCATATGGTCGCTTATCCCC
GGCGCTTGGGCTGACCCGGCACTACCCGCAGATCAAACTCTCTGGCCTGT
GGCCCATTTGAGAGCAAGATGATGGCTGCCACATTGGAAGCACATCGGGA
GACAATCGAGGGAAGTATTCCTTTGGGTCGTATTGGTACCCCCGAGGATG
TTGCAGGAGCGTGCTTGTTCTTGAGCAGCCGCGCCGGCTCGTATGTGAAT
GGCGCGACAATCACCCTGGATGGTGGTAGCGCAATCACAGCGAAGCTCTG
A back to topCoding sequence (CDS) from alignment at ACJE01000004.1:2368979..2369979- >ASPNIDRAFT_46473-T1 ID=ASPNIDRAFT_46473-T1|Name=ASPNIDRAFT_46473-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3156bp|location=Sequence derived from alignment at ACJE01000004.1:2368979..2369979- (Aspergillus niger ATCC 1015)
ATCAAACTCTCTGGCCTGTGGCCCATTTGAGAGCAAGATGATGGCTGCCA
CATTGGAAGCACATCGGGAGACAATCGAGGGAAGTATTCCTTTGGGTCGT
ATTGGTACCCCCGAGGATGTTGCAGGAGCGTGCTTGTTCTTGAGCAGCCG
CGCCGGCTCGTATGTGAATGGCGCGACAATCACCCTGGATGGTGGTAGCG
CAATCACAGCGAAGCTCTGAAGCTGCATGTTCTTGTCAACAACTCTGGGT
CCAATTGGGGTGCCCCGTACGATGAATACCCTTCGTCTGCTTGGACACGA
GTTCTCACTCTCAATCTTCATCGGGTATTCGACCTCACCAAGCTTCTCAC
CCCTCTACTGGAGAAGGCCGGTTCATCTGGCGACCCGGCTCGCATTATCA
ACATCGGTAGCATCGATGGCATAAGGGTTCCAGCTCTGGAAACCTTTGCT
TACAGTGCCAGTAAAGCTGGATTGCACCATTTGAGTCGTGTTTTGGCACA
CCACCTTGGAAGACGGAACATCACGGCAAAGTCGTGCTGGTCACTGGTGG
CGCCAAAGGAATCGGTCGGATGATCTCAGAGGGCTTCGTAAAGAACGGCG
CCACTGTGTATATCTCGTCGCGAGATGCCAAGTCTTGCGATAAAGCTGTA
AACGAGCTCAATGCACTTGGCACGGGTAAGGCGTATGCTATCCCTGCTAA
TTTCTACCAAGAGGAGGAAGTCAAAAGATTGGCCGAAGAGATTGCCAAGC
GCGAGAGCAATGGACGTTCAGCAGTTGTTCAACGTCAAGATCAAACTCTC
TGGCCTGTGGCCCATTTGAGAGCAAGATGATGGCTGCCACATTGGAAGCA
CATCGGGAGACAATCGAGGGAAGTATTCCTTTGGGTCGTATTGGTACCCC
CGAGGATGTTGCAGGAGCGTGCTTGTTCTTGAGCAGCCGCGCCGGCTCGT
ATGTGAATGGCGCGACAATCACCCTGGATGGTGGTAGCGCAATCACAGCG
AAGCTCTGAAGCTGCATGTTCTTGTCAACAACTCTGGGTCCAATTGGGGT
GCCCCGTACGATGAATACCCTTCGTCTGCTTGGACACGAGTTCTCACTCT
CAATCTTCATCGGGTATTCGACCTCACCAAGCTTCTCACCCCTCTACTGG
AGAAGGCCGGTTCATCTGGCGACCCGGCTCGCATTATCAACATCGGTAGC
ATCGATGGCATAAGGGTTCCAGCTCTGGAAACCTTTGCTTACAGTGCCAG
TAAAGCTGGATTGCACCATTTGAGTCGTGTTTTGGCACACCACCTTGGAA
GACGGAACATCACGGCAAAGTCGTGCTGGTCACTGGTGGCGCCAAAGGAA
TCGGTCGGATGATCTCAGAGGGCTTCGTAAAGAACGGCGCCACTGTGTAT
ATCTCGTCGCGAGATGCCAAGTCTTGCGATAAAGCTGTAAACGAGCTCAA
TGCACTTGGCACGGGTAAGGCGTATGCTATCCCTGCTAATTTCTACCAAG
AGGAGGAAGTCAAAAGATTGGCCGAAGAGATTGCCAAGCGCGAGAGCAAT
GGACGTTCAGCAGTTGTTCAACGTCAAGATCAAACTCTCTGGCCTGTGGC
CCATTTGAGAGCAAGATGATGGCTGCCACATTGGAAGCACATCGGGAGAC
AATCGAGGGAAGTATTCCTTTGGGTCGTATTGGTACCCCCGAGGATGTTG
CAGGAGCGTGCTTGTTCTTGAGCAGCCGCGCCGGCTCGTATGTGAATGGC
GCGACAATCACCCTGGATGGTGGTAGCGCAATCACAGCGAAGCTCTGAAG
CTGCATGTTCTTGTCAACAACTCTGGGTCCAATTGGGGTGCCCCGTACGA
TGAATACCCTTCGTCTGCTTGGACACGAGTTCTCACTCTCAATCTTCATC
GGGTATTCGACCTCACCAAGCTTCTCACCCCTCTACTGGAGAAGGCCGGT
TCATCTGGCGACCCGGCTCGCATTATCAACATCGGTAGCATCGATGGCAT
AAGGGTTCCAGCTCTGGAAACCTTTGCTTACAGTGCCAGTAAAGCTGGAT
TGCACCATTTGAGTCGTGTTTTGGCACACCACCTTGGAAGACGGAACATC
ACGGCAAAGTCGTGCTGGTCACTGGTGGCGCCAAAGGAATCGGTCGGATG
ATCTCAGAGGGCTTCGTAAAGAACGGCGCCACTGTGTATATCTCGTCGCG
AGATGCCAAGTCTTGCGATAAAGCTGTAAACGAGCTCAATGCACTTGGCA
CGGGTAAGGCGTATGCTATCCCTGCTAATTTCTACCAAGAGGAGGAAGTC
AAAAGATTGGCCGAAGAGATTGCCAAGCGCGAGAGCAATGGACGTTCAGC
AGTTGTTCAACGTCAAGATCAAACTCTCTGGCCTGTGGCCCATTTGAGAG
CAAGATGATGGCTGCCACATTGGAAGCACATCGGGAGACAATCGAGGGAA
GTATTCCTTTGGGTCGTATTGGTACCCCCGAGGATGTTGCAGGAGCGTGC
TTGTTCTTGAGCAGCCGCGCCGGCTCGTATGTGAATGGCGCGACAATCAC
CCTGGATGGTGGTAGCGCAATCACAGCGAAGCTCTGAAGCTGCATGTTCT
TGTCAACAACTCTGGGTCCAATTGGGGTGCCCCGTACGATGAATACCCTT
CGTCTGCTTGGACACGAGTTCTCACTCTCAATCTTCATCGGGTATTCGAC
CTCACCAAGCTTCTCACCCCTCTACTGGAGAAGGCCGGTTCATCTGGCGA
CCCGGCTCGCATTATCAACATCGGTAGCATCGATGGCATAAGGGTTCCAG
CTCTGGAAACCTTTGCTTACAGTGCCAGTAAAGCTGGATTGCACCATTTG
AGTCGTGTTTTGGCACACCACCTTGGAAGACGGAACATCACGGCAAAGTC
GTGCTGGTCACTGGTGGCGCCAAAGGAATCGGTCGGATGATCTCAGAGGG
CTTCGTAAAGAACGGCGCCACTGTGTATATCTCGTCGCGAGATGCCAAGT
CTTGCGATAAAGCTGTAAACGAGCTCAATGCACTTGGCACGGGTAAGGCG
TATGCTATCCCTGCTAATTTCTACCAAGAGGAGGAAGTCAAAAGATTGGC
CGAAGAGATTGCCAAGCGCGAGAGCAATGGACGTTCAGCAGTTGTTCAAC
GTCAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR020904 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | short chain dehydrogenase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000004.1 | supercontig | ACJE01000004.1:2368979..2369979 - |
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